Experiment: Chloramphenicol 5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_R0095 and Shew_R0096 are separated by 132 nucleotides Shew_R0096 and Shew_R0097 are separated by 20 nucleotides Shew_R0097 and Shew_R0098 are separated by 25 nucleotides Shew_R0098 and Shew_R0099 are separated by 48 nucleotides Shew_R0099 and Shew_R0100 are separated by 69 nucleotides Shew_R0100 and Shew_2919 are separated by 266 nucleotides Shew_2919 and Shew_2920 are separated by 70 nucleotides Shew_2920 and Shew_2921 are separated by 103 nucleotides
Shew_R0095: Shew_R0095 - tRNA-Leu (RefSeq), at 3,456,763 to 3,456,847
_R0095
Shew_R0096: Shew_R0096 - tRNA-Met (RefSeq), at 3,456,980 to 3,457,056
_R0096
Shew_R0097: Shew_R0097 - tRNA-Gln (RefSeq), at 3,457,077 to 3,457,151
_R0097
Shew_R0098: Shew_R0098 - tRNA-Gln (RefSeq), at 3,457,177 to 3,457,251
_R0098
Shew_R0099: Shew_R0099 - tRNA-Leu (RefSeq), at 3,457,300 to 3,457,384
_R0099
Shew_R0100: Shew_R0100 - tRNA-Met (RefSeq), at 3,457,454 to 3,457,530
_R0100
Shew_2919: Shew_2919 - translation-associated GTPase (RefSeq), at 3,457,797 to 3,458,888
_2919
Shew_2920: Shew_2920 - peptidyl-tRNA hydrolase (RefSeq), at 3,458,959 to 3,459,546
_2920
Shew_2921: Shew_2921 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq), at 3,459,650 to 3,460,843
_2921
Position (kb)
3457
3458
3459 Strain fitness (log2 ratio)
-1
0
1 at 3458.088 kb on + strand, within Shew_2919 at 3458.500 kb on + strand, within Shew_2919 at 3458.828 kb on - strand
Per-strain Table
Or see this region's nucleotide sequence