Strain Fitness in Shewanella loihica PV-4 around Shew_2866

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
3,397,921	+		Shew_2865	0.42	+0.2
3,397,929	-		Shew_2865	0.43	+0.3
3,398,031	-		Shew_2865	0.56	-0.1
3,398,104	+		Shew_2865	0.66	+0.6
3,398,192	+		Shew_2865	0.77	-0.2
3,398,229	-		Shew_2865	0.82	-0.1
3,398,253	+		Shew_2865	0.85	+1.1
3,398,253	+		Shew_2865	0.85	+0.8
3,398,253	+		Shew_2865	0.85	+1.2
3,398,261	-		Shew_2865	0.86	-0.2
3,398,261	-		Shew_2865	0.86	-0.2
3,398,261	-		Shew_2865	0.86	+0.7
3,398,273	-		Shew_2865	0.88	-0.4
3,398,273	-		Shew_2865	0.88	-0.0
3,398,273	-		Shew_2865	0.88	+0.6
3,398,277	+		Shew_2865	0.88	-1.3
3,398,285	-		Shew_2865	0.89	+0.6
3,398,313	+				-0.7
3,398,313	+				+0.4
3,398,349	+				+0.4
3,398,692	-				-0.2
3,398,806	-				+0.0
3,398,926	+				-0.3
3,399,153	-		Shew_2866	0.15	-0.2
3,399,304	+		Shew_2866	0.24	+0.9
3,399,354	+		Shew_2866	0.27	+1.2
3,399,453	-		Shew_2866	0.32	+0.1
3,399,492	+		Shew_2866	0.35	+0.3
3,399,511	-		Shew_2866	0.36	+0.1
3,399,513	+		Shew_2866	0.36	+0.4
3,399,579	-		Shew_2866	0.40	-0.0
3,399,977	-		Shew_2866	0.63	-0.4
3,400,176	+		Shew_2866	0.75	+0.8
3,400,176	+		Shew_2866	0.75	-0.1
3,400,176	+		Shew_2866	0.75	+0.6
3,400,184	-		Shew_2866	0.75	-0.5
3,400,184	-		Shew_2866	0.75	-0.3
3,400,186	+		Shew_2866	0.75	+2.1
3,400,666	+				+0.1
3,400,666	+				+0.0
3,400,674	-				+0.3
3,400,676	+				-0.1
3,400,818	+				-1.3
3,401,035	-		Shew_2867	0.13	-0.1
3,401,143	-		Shew_2867	0.16	-0.1
3,401,171	-		Shew_2867	0.17	+0.1
3,401,290	-		Shew_2867	0.21	+0.0
3,401,305	-		Shew_2867	0.21	-0.2