Strain Fitness in Shewanella loihica PV-4 around Shew_2846

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
3,373,885	+		Shew_2845	0.28	+0.1
3,373,893	-		Shew_2845	0.29	+0.5
3,373,893	-		Shew_2845	0.29	-1.1
3,373,911	-		Shew_2845	0.31	-0.9
3,374,115	-		Shew_2845	0.53	-0.1
3,374,171	-		Shew_2845	0.59	+0.2
3,374,255	+		Shew_2845	0.68	+0.4
3,374,307	+		Shew_2845	0.74	-1.1
3,374,656	+				+1.7
3,374,656	+				+0.0
3,374,791	+		Shew_2846	0.21	-0.9
3,374,854	-		Shew_2846	0.30	-0.2
3,374,989	+		Shew_2846	0.49	-0.9
3,375,063	-		Shew_2846	0.60	-0.3
3,375,227	+		Shew_2846	0.83	+0.3
3,375,244	+		Shew_2846	0.85	+0.4
3,375,505	-				+1.2
3,375,963	+	proA	Shew_2847	0.30	+1.0
3,376,069	+	proA	Shew_2847	0.38	-0.1
3,376,074	+	proA	Shew_2847	0.39	+0.2
3,376,116	-	proA	Shew_2847	0.42	+0.1
3,376,125	+	proA	Shew_2847	0.43	+0.1
3,376,216	+	proA	Shew_2847	0.50	+1.1