Strain Fitness in Shewanella loihica PV-4 around Shew_2067

Experiment: Chloramphenicol 5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShew_2065 and Shew_2066 are separated by 83 nucleotidesShew_2066 and Shew_2067 are separated by 2 nucleotidesShew_2067 and Shew_2068 overlap by 7 nucleotides Shew_2065: Shew_2065 - diguanylate cyclase/phosphodiesterase (RefSeq), at 2,386,115 to 2,388,043 _2065 Shew_2066: Shew_2066 - Na(+)-translocating NADH-quinone reductase subunit E (RefSeq), at 2,388,127 to 2,388,705 _2066 Shew_2067: Shew_2067 - electron transport complex, RnfABCDGE type, B subunit (RefSeq), at 2,388,708 to 2,389,277 _2067 Shew_2068: Shew_2068 - electron transport complex protein RnfC (RefSeq), at 2,389,271 to 2,391,883 _2068 Position (kb) 2388 2389 2390Strain fitness (log2 ratio) -1 0 1at 2387.971 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chloramphenicol 5 mg/ml
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2,387,971 - +0.5

Or see this region's nucleotide sequence