Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4086

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
4,762,567	+				-2.1
4,762,567	+				+1.0
4,762,626	+				-2.3
4,762,626	+				+0.8
4,762,626	+				+3.4
4,762,626	+				-0.4
4,762,627	-				+2.8
4,762,627	-				-0.4
4,762,663	+				-1.7
4,762,663	+				-0.2
4,762,664	-				+2.0
4,762,664	-				-0.3
4,762,696	+				-1.1
4,762,697	-				+1.1
4,762,820	+				-0.4
4,762,820	+				-1.9
4,762,820	+				+0.3
4,762,820	+				-2.3
4,762,820	+				-2.2
4,762,820	+				-0.6
4,762,821	-				+0.8
4,762,821	-				+0.6
4,762,821	-				+1.1
4,762,821	-				-0.8
4,762,821	-				+0.6
4,762,821	-				+0.6
4,762,821	-				+0.3
4,762,821	-				+0.8
4,762,821	-				+0.9
4,762,821	-				+0.2
4,762,821	-				-2.4
4,762,821	-				-0.5
4,762,821	-				-0.1
4,762,824	+				-2.2
4,762,824	+				+0.8
4,762,824	+				-0.3
4,762,824	+				-2.8
4,762,824	+				-1.1
4,762,824	+				-1.7
4,762,824	+				-0.5
4,762,824	+				-0.4
4,762,824	+				+0.6
4,762,824	+				+1.2
4,762,824	+				+0.0
4,762,824	+				-0.3
4,762,824	+				+0.7
4,762,824	+				+0.1
4,762,824	+				-0.4
4,762,824	+				-2.6
4,762,825	-				-1.8
4,762,825	-				+0.9
4,762,825	-				-0.3
4,762,825	-				-0.0
4,762,825	-				+1.4
4,762,825	-				+0.2
4,762,825	-				+0.7
4,762,825	-				+1.1
4,762,825	-				-0.7
4,762,825	-				-0.9
4,762,825	-				+1.0
4,762,825	-				+0.3
4,762,825	-				+0.1
4,762,825	-				+0.7
4,762,825	-				+0.3
4,762,825	-				-0.2
4,762,825	-				-1.2
4,762,825	-				-2.1
4,762,825	-				-0.6
4,762,825	-				+1.1
4,762,826	+				-0.1
4,762,826	+				-0.2
4,762,826	+				-0.7
4,762,827	-				+0.9
4,762,827	-				+0.1
4,762,827	-				+1.0
4,762,827	-				+1.1
4,762,827	-				+0.9
4,762,872	+				-1.8
4,762,873	-				-0.8
4,762,892	+				-2.5
4,762,892	+				-0.1
4,762,892	+				+0.9
4,762,893	-				-0.4
4,762,893	-				+0.2
4,762,893	-				+2.6
4,762,893	-				-0.2
4,762,893	-				+0.7
4,762,893	-				+0.4
4,762,893	-				+1.2
4,762,893	-				+0.4
4,762,893	-				-1.3
4,762,893	-				-0.2
4,762,893	-				-0.1
4,762,895	+				-3.0
4,762,895	+				-3.4
4,762,895	+				-1.5
4,762,896	-				+0.2
4,762,896	-				-0.6
4,762,896	-				+1.2
4,762,896	-				-0.6
4,762,896	-				+0.8
4,762,896	-				-0.0
4,762,964	-				-0.6
4,762,964	-				+1.0
4,762,964	-				-0.1
4,762,964	-				+0.8
4,762,964	-				+0.9
4,762,971	+				-1.4
4,762,996	+				-0.9
4,763,017	+				+1.6
4,763,017	+				+1.6
4,763,018	-				+0.1
4,763,018	-				+0.9
4,763,018	-				+0.8
4,763,018	-				+0.1
4,763,091	+				+1.5
4,763,091	+				-0.2
4,763,091	+				-0.2
4,763,092	-				-0.1
4,763,092	-				-0.5
4,763,138	+				+2.3
4,763,138	+				-0.4
4,763,139	-				+0.0
4,763,139	-				+1.0
4,763,139	-				-1.7
4,763,139	-				-1.9
4,763,139	-				+0.2
4,763,139	-				+1.0
4,763,139	-				+0.7
4,763,139	-				+0.3
4,763,139	-				+0.8
4,763,358	+		Pf6N2E2_4086	0.23	-0.0
4,763,358	+		Pf6N2E2_4086	0.23	+0.0
4,763,358	+		Pf6N2E2_4086	0.23	+0.1
4,763,359	-		Pf6N2E2_4086	0.23	+1.4
4,763,359	-		Pf6N2E2_4086	0.23	+0.7
4,763,359	-		Pf6N2E2_4086	0.23	-0.8
4,763,359	-		Pf6N2E2_4086	0.23	+1.6
4,763,403	+		Pf6N2E2_4086	0.26	-0.1
4,763,403	+		Pf6N2E2_4086	0.26	+0.1
4,763,403	+		Pf6N2E2_4086	0.26	-0.5
4,763,404	-		Pf6N2E2_4086	0.26	-1.2
4,763,404	-		Pf6N2E2_4086	0.26	+0.2
4,763,406	+		Pf6N2E2_4086	0.26	+0.2
4,763,406	+		Pf6N2E2_4086	0.26	-1.0
4,763,406	+		Pf6N2E2_4086	0.26	+0.3
4,763,406	+		Pf6N2E2_4086	0.26	+1.1
4,763,406	+		Pf6N2E2_4086	0.26	+1.4
4,763,406	+		Pf6N2E2_4086	0.26	+0.4
4,763,407	-		Pf6N2E2_4086	0.27	-0.2
4,763,407	-		Pf6N2E2_4086	0.27	+0.5
4,763,407	-		Pf6N2E2_4086	0.27	-1.7
4,763,407	-		Pf6N2E2_4086	0.27	+0.1
4,763,407	-		Pf6N2E2_4086	0.27	-0.2
4,763,469	-		Pf6N2E2_4086	0.31	-0.7
4,763,550	+		Pf6N2E2_4086	0.36	-3.0
4,763,550	+		Pf6N2E2_4086	0.36	-3.0
4,763,550	+		Pf6N2E2_4086	0.36	-0.8
4,763,550	+		Pf6N2E2_4086	0.36	+1.5
4,763,551	-		Pf6N2E2_4086	0.36	+0.1
4,763,635	+		Pf6N2E2_4086	0.42	+0.7
4,763,655	+		Pf6N2E2_4086	0.44	+1.0
4,763,655	+		Pf6N2E2_4086	0.44	-1.6
4,763,655	+		Pf6N2E2_4086	0.44	+0.8
4,763,655	+		Pf6N2E2_4086	0.44	-0.0
4,763,656	-		Pf6N2E2_4086	0.44	+0.2
4,763,656	-		Pf6N2E2_4086	0.44	-0.1
4,763,656	-		Pf6N2E2_4086	0.44	-0.6
4,763,656	-		Pf6N2E2_4086	0.44	+1.9
4,763,656	-		Pf6N2E2_4086	0.44	+0.2
4,763,656	-		Pf6N2E2_4086	0.44	+0.3
4,763,673	+		Pf6N2E2_4086	0.45	-0.2
4,763,673	+		Pf6N2E2_4086	0.45	+1.3
4,763,673	+		Pf6N2E2_4086	0.45	-1.5
4,763,673	+		Pf6N2E2_4086	0.45	-0.2
4,763,674	-		Pf6N2E2_4086	0.45	+1.1
4,763,674	-		Pf6N2E2_4086	0.45	-0.5
4,763,674	-		Pf6N2E2_4086	0.45	-0.2
4,763,674	-		Pf6N2E2_4086	0.45	-1.0
4,763,701	+		Pf6N2E2_4086	0.47	+0.6
4,763,702	-		Pf6N2E2_4086	0.47	-1.1
4,763,721	-		Pf6N2E2_4086	0.48	+1.6
4,763,837	+		Pf6N2E2_4086	0.56	-0.1
4,763,888	-		Pf6N2E2_4086	0.60	+1.6
4,763,888	-		Pf6N2E2_4086	0.60	-0.5
4,763,964	+		Pf6N2E2_4086	0.65	-0.1
4,763,964	+		Pf6N2E2_4086	0.65	-0.2
4,763,964	+		Pf6N2E2_4086	0.65	-1.6
4,763,964	+		Pf6N2E2_4086	0.65	+1.2
4,763,964	+		Pf6N2E2_4086	0.65	+0.3
4,763,964	+		Pf6N2E2_4086	0.65	+0.4
4,763,965	-		Pf6N2E2_4086	0.65	-0.3
4,763,965	-		Pf6N2E2_4086	0.65	-1.0
4,764,055	+		Pf6N2E2_4086	0.71	+0.9
4,764,056	-		Pf6N2E2_4086	0.71	-0.9
4,764,056	-		Pf6N2E2_4086	0.71	-0.1
4,764,090	+		Pf6N2E2_4086	0.74	+0.7
4,764,096	+		Pf6N2E2_4086	0.74	-2.3
4,764,096	+		Pf6N2E2_4086	0.74	-0.5
4,764,096	+		Pf6N2E2_4086	0.74	+0.9
4,764,096	+		Pf6N2E2_4086	0.74	-0.9
4,764,096	+		Pf6N2E2_4086	0.74	+0.7
4,764,096	+		Pf6N2E2_4086	0.74	+0.6
4,764,096	+		Pf6N2E2_4086	0.74	+1.4
4,764,096	+		Pf6N2E2_4086	0.74	-0.9
4,764,096	+		Pf6N2E2_4086	0.74	-0.8
4,764,096	+		Pf6N2E2_4086	0.74	+0.6
4,764,096	+		Pf6N2E2_4086	0.74	+0.1
4,764,096	+		Pf6N2E2_4086	0.74	-2.4
4,764,096	+		Pf6N2E2_4086	0.74	+0.3
4,764,096	+		Pf6N2E2_4086	0.74	+0.1
4,764,097	-		Pf6N2E2_4086	0.74	-0.6
4,764,097	-		Pf6N2E2_4086	0.74	-0.5
4,764,097	-		Pf6N2E2_4086	0.74	-0.3
4,764,097	-		Pf6N2E2_4086	0.74	+0.5
4,764,097	-		Pf6N2E2_4086	0.74	-0.9
4,764,097	-		Pf6N2E2_4086	0.74	-2.6
4,764,097	-		Pf6N2E2_4086	0.74	-0.1
4,764,097	-		Pf6N2E2_4086	0.74	+2.3
4,764,099	+		Pf6N2E2_4086	0.74	+0.9
4,764,099	+		Pf6N2E2_4086	0.74	-0.6
4,764,100	-		Pf6N2E2_4086	0.74	+0.0
4,764,100	-		Pf6N2E2_4086	0.74	-0.0
4,764,100	-		Pf6N2E2_4086	0.74	-0.4
4,764,100	-		Pf6N2E2_4086	0.74	+0.4
4,764,100	-		Pf6N2E2_4086	0.74	-0.7
4,764,100	-		Pf6N2E2_4086	0.74	-0.2
4,764,315	+		Pf6N2E2_4086	0.89	+0.7
4,764,316	-		Pf6N2E2_4086	0.89	-0.4
4,764,316	-		Pf6N2E2_4086	0.89	-0.0
4,764,532	+				+1.0
4,764,533	-				+0.2
4,764,533	-				+1.0
4,764,556	+				-0.0
4,764,556	+				+0.3
4,764,556	+				+4.4
4,764,556	+				+0.6
4,764,556	+				-0.4
4,764,556	+				-0.6
4,764,556	+				-0.7
4,764,556	+				-0.4
4,764,557	-				-0.9
4,764,557	-				+0.5
4,764,557	-				-0.6
4,764,557	-				-1.9
4,764,557	-				-0.8
4,764,557	-				-2.8
4,764,557	-				-1.2
4,764,557	-				+0.6
4,764,557	-				+1.2
4,764,557	-				+1.2
4,764,570	+				-0.2
4,764,571	-				+0.8
4,764,624	+				+0.7
4,764,624	+				+0.5
4,764,624	+				-2.4
4,764,624	+				-2.6
4,764,625	-				-1.2
4,764,735	+		Pf6N2E2_4087	0.13	-0.7
4,764,736	-		Pf6N2E2_4087	0.13	-0.6
4,764,887	-		Pf6N2E2_4087	0.28	-0.7
4,764,887	-		Pf6N2E2_4087	0.28	-0.1
4,764,887	-		Pf6N2E2_4087	0.28	-0.9
4,764,918	+		Pf6N2E2_4087	0.31	-0.9
4,764,918	+		Pf6N2E2_4087	0.31	-1.7
4,764,919	-		Pf6N2E2_4087	0.31	+0.9
4,764,919	-		Pf6N2E2_4087	0.31	+0.4
4,764,919	-		Pf6N2E2_4087	0.31	-1.5
4,765,001	-		Pf6N2E2_4087	0.39	-1.8
4,765,080	+		Pf6N2E2_4087	0.47	-0.9
4,765,080	+		Pf6N2E2_4087	0.47	-0.9
4,765,080	+		Pf6N2E2_4087	0.47	-0.8
4,765,080	+		Pf6N2E2_4087	0.47	-1.4
4,765,080	+		Pf6N2E2_4087	0.47	-0.9
4,765,080	+		Pf6N2E2_4087	0.47	-1.0
4,765,081	-		Pf6N2E2_4087	0.47	-0.1
4,765,081	-		Pf6N2E2_4087	0.47	-0.3
4,765,209	+		Pf6N2E2_4087	0.60	-1.4
4,765,209	+		Pf6N2E2_4087	0.60	-2.2
4,765,210	-		Pf6N2E2_4087	0.60	+0.2
4,765,210	-		Pf6N2E2_4087	0.60	-0.0
4,765,210	-		Pf6N2E2_4087	0.60	-0.6
4,765,327	-		Pf6N2E2_4087	0.71	-0.5
4,765,453	-		Pf6N2E2_4087	0.84	-1.6