Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2612

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,067,903	+		Pf6N2E2_2611	0.15	-1.4
3,067,904	-		Pf6N2E2_2611	0.15	-2.1
3,067,929	+		Pf6N2E2_2611	0.17	+0.3
3,067,929	+		Pf6N2E2_2611	0.17	-1.3
3,067,929	+		Pf6N2E2_2611	0.17	-0.7
3,067,930	-		Pf6N2E2_2611	0.17	+1.3
3,067,930	-		Pf6N2E2_2611	0.17	-2.4
3,067,930	-		Pf6N2E2_2611	0.17	+0.4
3,068,305	+		Pf6N2E2_2611	0.55	-1.1
3,068,306	-		Pf6N2E2_2611	0.55	+0.2
3,068,306	-		Pf6N2E2_2611	0.55	-1.2
3,068,356	-		Pf6N2E2_2611	0.60	+0.9
3,068,437	+		Pf6N2E2_2611	0.68	+0.8
3,068,438	-		Pf6N2E2_2611	0.68	+1.0
3,068,484	+		Pf6N2E2_2611	0.73	-1.4
3,068,484	+		Pf6N2E2_2611	0.73	-0.0
3,068,484	+		Pf6N2E2_2611	0.73	-3.2
3,068,484	+		Pf6N2E2_2611	0.73	+0.3
3,068,485	-		Pf6N2E2_2611	0.73	-0.2
3,068,529	+		Pf6N2E2_2611	0.77	+0.1
3,068,529	+		Pf6N2E2_2611	0.77	+1.1
3,068,529	+		Pf6N2E2_2611	0.77	-0.6
3,068,529	+		Pf6N2E2_2611	0.77	-1.6
3,068,529	+		Pf6N2E2_2611	0.77	-1.1
3,068,530	-		Pf6N2E2_2611	0.77	-1.4
3,068,530	-		Pf6N2E2_2611	0.77	+0.4
3,068,530	-		Pf6N2E2_2611	0.77	-0.2
3,068,530	-		Pf6N2E2_2611	0.77	-0.2
3,068,589	+		Pf6N2E2_2611	0.83	-0.3
3,068,590	-		Pf6N2E2_2611	0.83	+0.5
3,068,628	+		Pf6N2E2_2611	0.87	+2.1
3,068,629	-		Pf6N2E2_2611	0.87	-2.5
3,068,629	-		Pf6N2E2_2611	0.87	-0.3
3,068,676	+				+0.5
3,068,758	+				-0.4
3,068,758	+				+0.3
3,068,758	+				-1.9
3,068,758	+				+1.7
3,068,759	-				+1.4
3,068,759	-				+1.9
3,068,942	+				+1.7
3,068,986	+				+1.0
3,068,987	-				+1.2
3,069,118	+		Pf6N2E2_2612	0.11	+1.1
3,069,119	-		Pf6N2E2_2612	0.11	-0.2
3,069,119	-		Pf6N2E2_2612	0.11	+0.7
3,069,149	-		Pf6N2E2_2612	0.13	+0.1
3,069,254	+		Pf6N2E2_2612	0.16	-0.5
3,069,254	+		Pf6N2E2_2612	0.16	+2.5
3,069,255	-		Pf6N2E2_2612	0.16	+1.7
3,069,355	+		Pf6N2E2_2612	0.20	+1.2
3,069,388	+		Pf6N2E2_2612	0.21	+2.6
3,069,389	-		Pf6N2E2_2612	0.21	+0.3
3,069,510	+		Pf6N2E2_2612	0.25	+2.8
3,069,510	+		Pf6N2E2_2612	0.25	+0.8
3,069,511	-		Pf6N2E2_2612	0.25	-1.3
3,069,511	-		Pf6N2E2_2612	0.25	-1.8
3,069,564	+		Pf6N2E2_2612	0.27	+0.2
3,069,565	-		Pf6N2E2_2612	0.27	+1.3
3,069,565	-		Pf6N2E2_2612	0.27	+0.7
3,069,628	+		Pf6N2E2_2612	0.29	+0.7
3,069,640	+		Pf6N2E2_2612	0.29	+1.3
3,069,641	-		Pf6N2E2_2612	0.29	+2.3
3,069,841	+		Pf6N2E2_2612	0.36	+4.2
3,069,841	+		Pf6N2E2_2612	0.36	-0.4
3,069,841	+		Pf6N2E2_2612	0.36	-0.7
3,069,842	-		Pf6N2E2_2612	0.36	+2.1
3,069,842	-		Pf6N2E2_2612	0.36	+1.3
3,069,885	-		Pf6N2E2_2612	0.38	+0.7
3,070,141	+		Pf6N2E2_2612	0.46	-0.1
3,070,141	+		Pf6N2E2_2612	0.46	-1.3
3,070,141	+		Pf6N2E2_2612	0.46	+0.9
3,070,141	+		Pf6N2E2_2612	0.46	+3.2
3,070,141	+		Pf6N2E2_2612	0.46	+1.6
3,070,141	+		Pf6N2E2_2612	0.46	+0.6
3,070,142	-		Pf6N2E2_2612	0.47	+0.7
3,070,142	-		Pf6N2E2_2612	0.47	-0.2
3,070,175	+		Pf6N2E2_2612	0.48	+1.4
3,070,176	-		Pf6N2E2_2612	0.48	+0.3
3,070,221	+		Pf6N2E2_2612	0.49	+1.2
3,070,221	+		Pf6N2E2_2612	0.49	-1.4
3,070,221	+		Pf6N2E2_2612	0.49	+1.9
3,070,221	+		Pf6N2E2_2612	0.49	+1.5
3,070,221	+		Pf6N2E2_2612	0.49	+3.0
3,070,221	+		Pf6N2E2_2612	0.49	+3.3
3,070,222	-		Pf6N2E2_2612	0.49	+0.2
3,070,222	-		Pf6N2E2_2612	0.49	+3.1
3,070,222	-		Pf6N2E2_2612	0.49	+0.8
3,070,224	+		Pf6N2E2_2612	0.49	+1.3
3,070,224	+		Pf6N2E2_2612	0.49	+1.0
3,070,224	+		Pf6N2E2_2612	0.49	+0.9
3,070,224	+		Pf6N2E2_2612	0.49	+0.6
3,070,224	+		Pf6N2E2_2612	0.49	+1.5
3,070,224	+		Pf6N2E2_2612	0.49	+0.8
3,070,225	-		Pf6N2E2_2612	0.49	-1.2
3,070,225	-		Pf6N2E2_2612	0.49	+2.9
3,070,259	+		Pf6N2E2_2612	0.51	+1.3
3,070,259	+		Pf6N2E2_2612	0.51	+1.0
3,070,407	+		Pf6N2E2_2612	0.56	-0.3
3,070,407	+		Pf6N2E2_2612	0.56	+3.3
3,070,407	+		Pf6N2E2_2612	0.56	-0.7
3,070,554	-		Pf6N2E2_2612	0.61	+0.8
3,070,567	+		Pf6N2E2_2612	0.61	+0.3
3,070,567	+		Pf6N2E2_2612	0.61	+2.1
3,070,568	-		Pf6N2E2_2612	0.61	+2.3
3,070,568	-		Pf6N2E2_2612	0.61	-0.4
3,070,568	-		Pf6N2E2_2612	0.61	+0.1
3,070,568	-		Pf6N2E2_2612	0.61	-3.6
3,070,737	+		Pf6N2E2_2612	0.67	+1.0
3,070,750	+		Pf6N2E2_2612	0.67	+0.5
3,070,750	+		Pf6N2E2_2612	0.67	+1.4
3,071,002	+		Pf6N2E2_2612	0.76	+1.9
3,071,003	-		Pf6N2E2_2612	0.76	+2.3
3,071,111	-		Pf6N2E2_2612	0.80	+0.4
3,071,117	+		Pf6N2E2_2612	0.80	-0.3
3,071,203	+		Pf6N2E2_2612	0.83	-0.2
3,071,277	+		Pf6N2E2_2612	0.85	-0.4
3,071,277	+		Pf6N2E2_2612	0.85	+1.8
3,071,277	+		Pf6N2E2_2612	0.85	+0.8
3,071,278	-		Pf6N2E2_2612	0.85	-1.3
3,071,326	+		Pf6N2E2_2612	0.87	+0.1
3,071,326	+		Pf6N2E2_2612	0.87	+0.8
3,071,326	+		Pf6N2E2_2612	0.87	+1.2
3,071,326	+		Pf6N2E2_2612	0.87	+1.3
3,071,326	+		Pf6N2E2_2612	0.87	+3.9
3,071,327	-		Pf6N2E2_2612	0.87	+2.4
3,071,327	-		Pf6N2E2_2612	0.87	+1.0
3,071,327	-		Pf6N2E2_2612	0.87	+1.2
3,071,327	-		Pf6N2E2_2612	0.87	+1.7
3,071,327	-		Pf6N2E2_2612	0.87	-3.1
3,071,327	-		Pf6N2E2_2612	0.87	+1.5
3,071,327	-		Pf6N2E2_2612	0.87	-2.0
3,071,327	-		Pf6N2E2_2612	0.87	-0.0
3,071,440	+				+0.4
3,071,440	+				-0.6
3,071,440	+				+0.6
3,071,441	-				-0.2
3,071,441	-				+0.2
3,071,441	-				-0.2
3,071,441	-				+1.5
3,071,441	-				-0.9
3,071,467	+				+0.2
3,071,467	+				+1.5
3,071,468	-				+0.3
3,071,495	-				+0.3
3,071,519	-				+1.2
3,071,605	+				+0.9
3,071,605	+				+2.9
3,071,606	-				-1.8
3,071,606	-				+0.7
3,071,609	-				+1.3
3,071,609	-				+1.1
3,071,609	-				+1.5
3,071,619	-				+2.1
3,071,619	-				+1.8
3,071,702	+				+2.3
3,071,702	+				+0.1
3,071,702	+				+2.8
3,071,703	-				+0.7
3,071,717	+				-0.1
3,071,717	+				+0.6
3,071,718	-				-0.0
3,071,724	+				+1.2
3,071,725	-				+0.0
3,071,725	-				+1.2
3,071,866	+		Pf6N2E2_2613	0.13	-0.8
3,071,866	+		Pf6N2E2_2613	0.13	+0.5
3,071,867	-		Pf6N2E2_2613	0.13	-0.1
3,071,968	+		Pf6N2E2_2613	0.27	+1.7
3,071,968	+		Pf6N2E2_2613	0.27	-0.4
3,071,969	-		Pf6N2E2_2613	0.27	+1.8
3,071,969	-		Pf6N2E2_2613	0.27	+0.5
3,071,969	-		Pf6N2E2_2613	0.27	-0.8
3,071,995	+		Pf6N2E2_2613	0.31	+1.7
3,072,238	+		Pf6N2E2_2613	0.64	+2.7
3,072,241	+		Pf6N2E2_2613	0.64	+0.3
3,072,241	+		Pf6N2E2_2613	0.64	+0.4
3,072,241	+		Pf6N2E2_2613	0.64	+1.9
3,072,241	+		Pf6N2E2_2613	0.64	+1.2
3,072,242	-		Pf6N2E2_2613	0.64	-0.1
3,072,242	-		Pf6N2E2_2613	0.64	+1.2
3,072,242	-		Pf6N2E2_2613	0.64	-0.5
3,072,242	-		Pf6N2E2_2613	0.64	+1.7
3,072,373	+		Pf6N2E2_2613	0.82	+2.0
3,072,374	-		Pf6N2E2_2613	0.82	+1.6
3,072,379	+		Pf6N2E2_2613	0.83	+1.7
3,072,379	+		Pf6N2E2_2613	0.83	+0.1
3,072,379	+		Pf6N2E2_2613	0.83	-2.2
3,072,379	+		Pf6N2E2_2613	0.83	+2.3
3,072,379	+		Pf6N2E2_2613	0.83	+2.6
3,072,379	+		Pf6N2E2_2613	0.83	+1.5
3,072,379	+		Pf6N2E2_2613	0.83	-0.6
3,072,379	+		Pf6N2E2_2613	0.83	+1.5
3,072,379	+		Pf6N2E2_2613	0.83	+0.7
3,072,380	-		Pf6N2E2_2613	0.83	-0.3
3,072,380	-		Pf6N2E2_2613	0.83	-0.1
3,072,380	-		Pf6N2E2_2613	0.83	+0.1
3,072,380	-		Pf6N2E2_2613	0.83	-0.5
3,072,380	-		Pf6N2E2_2613	0.83	-0.8
3,072,380	-		Pf6N2E2_2613	0.83	-0.1
3,072,380	-		Pf6N2E2_2613	0.83	-0.8
3,072,380	-		Pf6N2E2_2613	0.83	+0.0
3,072,380	-		Pf6N2E2_2613	0.83	+1.1
3,072,383	+		Pf6N2E2_2613	0.83	+2.4
3,072,383	+		Pf6N2E2_2613	0.83	+0.6
3,072,383	+		Pf6N2E2_2613	0.83	+1.5
3,072,384	-		Pf6N2E2_2613	0.83	+0.7
3,072,384	-		Pf6N2E2_2613	0.83	+1.5
3,072,485	+				+1.8
3,072,485	+				+0.7
3,072,559	+				+1.2
3,072,560	-				-0.1
3,072,610	-				+2.4
3,072,610	-				+0.3
3,072,615	+				+2.2
3,072,615	+				-1.8
3,072,615	+				+0.8