Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2610

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,065,634	-		Pf6N2E2_2608	0.83	+0.0
3,065,759	+				-2.7
3,065,759	+				-0.2
3,065,759	+				+0.5
3,065,759	+				-0.5
3,065,760	-				-1.3
3,065,978	-		Pf6N2E2_2609	0.12	+1.7
3,066,062	+		Pf6N2E2_2609	0.24	-2.0
3,066,063	-		Pf6N2E2_2609	0.24	+0.2
3,066,063	-		Pf6N2E2_2609	0.24	-0.7
3,066,063	-		Pf6N2E2_2609	0.24	+0.4
3,066,128	+		Pf6N2E2_2609	0.33	+0.5
3,066,128	+		Pf6N2E2_2609	0.33	-0.3
3,066,175	+		Pf6N2E2_2609	0.40	-1.5
3,066,176	-		Pf6N2E2_2609	0.40	+0.8
3,066,176	-		Pf6N2E2_2609	0.40	+0.6
3,066,287	+		Pf6N2E2_2609	0.56	-0.2
3,066,288	-		Pf6N2E2_2609	0.56	-0.9
3,066,288	-		Pf6N2E2_2609	0.56	-0.9
3,066,291	+		Pf6N2E2_2609	0.56	-0.8
3,066,291	+		Pf6N2E2_2609	0.56	-1.0
3,066,291	+		Pf6N2E2_2609	0.56	+0.5
3,066,292	-		Pf6N2E2_2609	0.56	+0.7
3,066,292	-		Pf6N2E2_2609	0.56	-0.8
3,066,292	-		Pf6N2E2_2609	0.56	+0.9
3,066,292	-		Pf6N2E2_2609	0.56	-0.0
3,066,292	-		Pf6N2E2_2609	0.56	-0.6
3,066,292	-		Pf6N2E2_2609	0.56	-1.1
3,066,292	-		Pf6N2E2_2609	0.56	-0.9
3,066,292	-		Pf6N2E2_2609	0.56	-1.5
3,066,292	-		Pf6N2E2_2609	0.56	+0.6
3,066,292	-		Pf6N2E2_2609	0.56	+0.5
3,066,292	-		Pf6N2E2_2609	0.56	-1.0
3,066,292	-		Pf6N2E2_2609	0.56	-0.0
3,066,292	-		Pf6N2E2_2609	0.56	-1.7
3,066,450	+		Pf6N2E2_2609	0.79	+0.9
3,066,451	-		Pf6N2E2_2609	0.79	+0.8
3,066,451	-		Pf6N2E2_2609	0.79	-1.7
3,066,451	-		Pf6N2E2_2609	0.79	-0.5
3,066,451	-		Pf6N2E2_2609	0.79	-1.5
3,066,451	-		Pf6N2E2_2609	0.79	-1.8
3,066,460	+		Pf6N2E2_2609	0.80	-1.4
3,066,460	+		Pf6N2E2_2609	0.80	-1.1
3,066,460	+		Pf6N2E2_2609	0.80	-1.0
3,066,460	+		Pf6N2E2_2609	0.80	-0.7
3,066,461	-		Pf6N2E2_2609	0.80	-2.0
3,066,461	-		Pf6N2E2_2609	0.80	+0.9
3,066,637	+				+0.9
3,066,637	+				+0.4
3,066,637	+				-0.2
3,066,637	+				-2.5
3,066,637	+				+0.8
3,066,637	+				-1.7
3,066,637	+				-0.5
3,066,637	+				-1.6
3,066,637	+				-0.3
3,066,637	+				-2.7
3,066,637	+				+0.6
3,066,638	-				-0.0
3,066,638	-				-2.1
3,066,638	-				-1.2
3,066,638	-				+0.1
3,066,638	-				+0.8
3,066,694	+				-1.8
3,066,694	+				-1.5
3,066,694	+				+0.7
3,066,698	-				-2.0
3,066,746	-		Pf6N2E2_2610	0.13	-0.3
3,066,748	+		Pf6N2E2_2610	0.13	-0.4
3,066,749	-		Pf6N2E2_2610	0.13	+0.9
3,066,749	-		Pf6N2E2_2610	0.13	-0.4
3,066,772	+		Pf6N2E2_2610	0.15	-0.9
3,066,772	+		Pf6N2E2_2610	0.15	-0.6
3,066,772	+		Pf6N2E2_2610	0.15	+1.1
3,066,772	+		Pf6N2E2_2610	0.15	+0.1
3,066,772	+		Pf6N2E2_2610	0.15	+0.0
3,066,772	+		Pf6N2E2_2610	0.15	-0.3
3,066,772	+		Pf6N2E2_2610	0.15	+0.3
3,066,773	-		Pf6N2E2_2610	0.15	-1.7
3,066,773	-		Pf6N2E2_2610	0.15	-2.2
3,066,773	-		Pf6N2E2_2610	0.15	+1.5
3,066,773	-		Pf6N2E2_2610	0.15	+0.1
3,066,773	-		Pf6N2E2_2610	0.15	-0.8
3,066,773	-		Pf6N2E2_2610	0.15	-0.7
3,066,773	-		Pf6N2E2_2610	0.15	-1.0
3,066,773	-		Pf6N2E2_2610	0.15	-0.6
3,066,773	-		Pf6N2E2_2610	0.15	-1.0
3,066,773	-		Pf6N2E2_2610	0.15	+0.0
3,066,773	-		Pf6N2E2_2610	0.15	+0.6
3,066,773	-		Pf6N2E2_2610	0.15	+0.5
3,066,865	+		Pf6N2E2_2610	0.23	-0.1
3,066,865	+		Pf6N2E2_2610	0.23	+1.0
3,066,865	+		Pf6N2E2_2610	0.23	+0.8
3,066,865	+		Pf6N2E2_2610	0.23	+0.0
3,066,865	+		Pf6N2E2_2610	0.23	-0.4
3,066,866	-		Pf6N2E2_2610	0.23	-0.3
3,066,866	-		Pf6N2E2_2610	0.23	-0.0
3,066,866	-		Pf6N2E2_2610	0.23	+1.7
3,066,866	-		Pf6N2E2_2610	0.23	+0.0
3,066,866	-		Pf6N2E2_2610	0.23	-0.6
3,066,866	-		Pf6N2E2_2610	0.23	+0.7
3,066,866	-		Pf6N2E2_2610	0.23	+0.1
3,066,866	-		Pf6N2E2_2610	0.23	-0.8
3,066,866	-		Pf6N2E2_2610	0.23	-0.2
3,066,940	+		Pf6N2E2_2610	0.29	-0.7
3,066,940	+		Pf6N2E2_2610	0.29	+1.1
3,066,940	+		Pf6N2E2_2610	0.29	-1.8
3,066,940	+		Pf6N2E2_2610	0.29	-1.7
3,066,941	-		Pf6N2E2_2610	0.29	+0.4
3,066,987	-		Pf6N2E2_2610	0.33	-2.7
3,067,034	-		Pf6N2E2_2610	0.37	+0.9
3,067,034	-		Pf6N2E2_2610	0.37	-2.6
3,067,060	+		Pf6N2E2_2610	0.40	-0.1
3,067,060	+		Pf6N2E2_2610	0.40	+0.8
3,067,061	-		Pf6N2E2_2610	0.40	-3.5
3,067,063	+		Pf6N2E2_2610	0.40	-0.7
3,067,063	+		Pf6N2E2_2610	0.40	+3.7
3,067,064	-		Pf6N2E2_2610	0.40	-0.5
3,067,064	-		Pf6N2E2_2610	0.40	-1.0
3,067,264	+		Pf6N2E2_2610	0.57	-2.5
3,067,264	+		Pf6N2E2_2610	0.57	-0.6
3,067,264	+		Pf6N2E2_2610	0.57	-3.1
3,067,264	+		Pf6N2E2_2610	0.57	-0.8
3,067,265	-		Pf6N2E2_2610	0.57	-0.2
3,067,265	-		Pf6N2E2_2610	0.57	-1.2
3,067,265	-		Pf6N2E2_2610	0.57	+0.2
3,067,265	-		Pf6N2E2_2610	0.57	-0.8
3,067,265	-		Pf6N2E2_2610	0.57	-1.3
3,067,265	-		Pf6N2E2_2610	0.57	+1.1
3,067,265	-		Pf6N2E2_2610	0.57	-2.2
3,067,312	+		Pf6N2E2_2610	0.61	+0.1
3,067,526	+		Pf6N2E2_2610	0.80	-0.1
3,067,526	+		Pf6N2E2_2610	0.80	-1.6
3,067,526	+		Pf6N2E2_2610	0.80	-1.5
3,067,543	-		Pf6N2E2_2610	0.81	+0.5
3,067,665	+				-0.9
3,067,751	-				-0.1
3,067,903	+		Pf6N2E2_2611	0.15	-1.4
3,067,904	-		Pf6N2E2_2611	0.15	-2.1
3,067,929	+		Pf6N2E2_2611	0.17	+0.3
3,067,929	+		Pf6N2E2_2611	0.17	-1.3
3,067,929	+		Pf6N2E2_2611	0.17	-0.7
3,067,930	-		Pf6N2E2_2611	0.17	+1.3
3,067,930	-		Pf6N2E2_2611	0.17	-2.4
3,067,930	-		Pf6N2E2_2611	0.17	+0.4
3,068,305	+		Pf6N2E2_2611	0.55	-1.1
3,068,306	-		Pf6N2E2_2611	0.55	+0.2
3,068,306	-		Pf6N2E2_2611	0.55	-1.2
3,068,356	-		Pf6N2E2_2611	0.60	+0.9
3,068,437	+		Pf6N2E2_2611	0.68	+0.8
3,068,438	-		Pf6N2E2_2611	0.68	+1.0
3,068,484	+		Pf6N2E2_2611	0.73	-1.4
3,068,484	+		Pf6N2E2_2611	0.73	-0.0
3,068,484	+		Pf6N2E2_2611	0.73	-3.2
3,068,484	+		Pf6N2E2_2611	0.73	+0.3
3,068,485	-		Pf6N2E2_2611	0.73	-0.2
3,068,529	+		Pf6N2E2_2611	0.77	+0.1
3,068,529	+		Pf6N2E2_2611	0.77	+1.1
3,068,529	+		Pf6N2E2_2611	0.77	-0.6
3,068,529	+		Pf6N2E2_2611	0.77	-1.6
3,068,529	+		Pf6N2E2_2611	0.77	-1.1
3,068,530	-		Pf6N2E2_2611	0.77	-1.4
3,068,530	-		Pf6N2E2_2611	0.77	+0.4
3,068,530	-		Pf6N2E2_2611	0.77	-0.2
3,068,530	-		Pf6N2E2_2611	0.77	-0.2
3,068,589	+		Pf6N2E2_2611	0.83	-0.3
3,068,590	-		Pf6N2E2_2611	0.83	+0.5
3,068,628	+		Pf6N2E2_2611	0.87	+2.1
3,068,629	-		Pf6N2E2_2611	0.87	-2.5
3,068,629	-		Pf6N2E2_2611	0.87	-0.3
3,068,676	+				+0.5
3,068,758	+				-0.4
3,068,758	+				+0.3
3,068,758	+				-1.9
3,068,758	+				+1.7
3,068,759	-				+1.4
3,068,759	-				+1.9