Experiment: Cobalt chloride 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2219 and Ga0059261_2220 overlap by 4 nucleotides Ga0059261_2220 and Ga0059261_2221 are separated by 259 nucleotides
Ga0059261_2219: Ga0059261_2219 - GTP cyclohydrolase II, at 2,322,267 to 2,323,325
_2219
Ga0059261_2220: Ga0059261_2220 - exodeoxyribonuclease III (xth), at 2,323,322 to 2,324,194
_2220
Ga0059261_2221: Ga0059261_2221 - Outer membrane lipoprotein-sorting protein, at 2,324,454 to 2,325,086
_2221
Position (kb)
2323
2324
2325 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.439 kb on - strand, within Ga0059261_2220 at 2323.795 kb on - strand, within Ga0059261_2220 at 2323.795 kb on - strand, within Ga0059261_2220 at 2323.795 kb on - strand, within Ga0059261_2220 at 2323.954 kb on - strand, within Ga0059261_2220 at 2323.954 kb on - strand, within Ga0059261_2220 at 2324.122 kb on - strand at 2324.122 kb on - strand at 2324.122 kb on - strand at 2324.122 kb on - strand at 2324.122 kb on - strand at 2324.122 kb on - strand at 2324.212 kb on + strand at 2324.212 kb on + strand at 2324.212 kb on + strand at 2324.213 kb on - strand at 2324.213 kb on - strand at 2324.213 kb on - strand at 2324.222 kb on + strand at 2324.222 kb on + strand at 2324.222 kb on + strand at 2324.222 kb on + strand at 2324.222 kb on + strand at 2324.222 kb on + strand at 2324.223 kb on - strand at 2324.223 kb on - strand at 2324.223 kb on - strand at 2324.223 kb on - strand at 2324.275 kb on + strand at 2324.276 kb on - strand at 2324.276 kb on - strand at 2324.276 kb on - strand at 2324.276 kb on - strand at 2324.351 kb on + strand at 2324.351 kb on + strand at 2324.351 kb on + strand at 2324.351 kb on + strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.398 kb on + strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.412 kb on + strand at 2324.413 kb on - strand at 2325.087 kb on - strand at 2325.127 kb on + strand at 2325.128 kb on - strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.04 mM remove 2,323,439 - Ga0059261_2220 0.13 +0.9 2,323,439 - Ga0059261_2220 0.13 +0.1 2,323,439 - Ga0059261_2220 0.13 +0.5 2,323,439 - Ga0059261_2220 0.13 -0.1 2,323,439 - Ga0059261_2220 0.13 -0.2 2,323,439 - Ga0059261_2220 0.13 -0.7 2,323,439 - Ga0059261_2220 0.13 +0.3 2,323,439 - Ga0059261_2220 0.13 +0.8 2,323,795 - Ga0059261_2220 0.54 -0.4 2,323,795 - Ga0059261_2220 0.54 +0.2 2,323,795 - Ga0059261_2220 0.54 +0.7 2,323,954 - Ga0059261_2220 0.72 -0.4 2,323,954 - Ga0059261_2220 0.72 +0.6 2,324,122 - -0.2 2,324,122 - -0.1 2,324,122 - -0.1 2,324,122 - +0.4 2,324,122 - -1.0 2,324,122 - -0.3 2,324,212 + +0.6 2,324,212 + -0.0 2,324,212 + +0.0 2,324,213 - +0.3 2,324,213 - -0.5 2,324,213 - -0.1 2,324,222 + -0.1 2,324,222 + -0.5 2,324,222 + -0.0 2,324,222 + -0.1 2,324,222 + +1.2 2,324,222 + +0.9 2,324,223 - +0.7 2,324,223 - +0.7 2,324,223 - +0.2 2,324,223 - +0.2 2,324,275 + -0.4 2,324,276 - -0.2 2,324,276 - +0.9 2,324,276 - +0.2 2,324,276 - +0.2 2,324,351 + -1.0 2,324,351 + -1.2 2,324,351 + -0.7 2,324,351 + -0.6 2,324,352 - -1.3 2,324,352 - -1.0 2,324,352 - -0.2 2,324,352 - -1.2 2,324,352 - -1.0 2,324,397 + -0.4 2,324,397 + -1.8 2,324,397 + -0.0 2,324,397 + -2.0 2,324,397 + -0.9 2,324,397 + -0.9 2,324,397 + -0.0 2,324,397 + -0.8 2,324,397 + -0.3 2,324,397 + -1.6 2,324,398 + -1.5 2,324,398 - -0.4 2,324,398 - -1.8 2,324,398 - -1.1 2,324,398 - -0.3 2,324,398 - +0.0 2,324,398 - -1.3 2,324,398 - -1.6 2,324,412 + -0.0 2,324,413 - -0.5 2,325,087 - -2.0 2,325,127 + +0.7 2,325,128 - +0.3 2,325,170 + +1.0 2,325,170 + -0.3 2,325,170 + -0.9 2,325,170 + -0.8 2,325,170 + +0.1 2,325,170 + +0.3 2,325,170 + -0.5 2,325,170 + -0.1 2,325,170 + -0.8 2,325,171 - -0.9 2,325,171 - +0.1 2,325,171 - +0.1 2,325,171 - -0.0 2,325,171 - +0.6 2,325,171 - -1.4 2,325,171 - -0.3 2,325,171 - +0.1 2,325,171 - +0.4 2,325,171 - +0.8 2,325,171 - -0.1 2,325,171 - +0.9 2,325,175 + -0.0 2,325,175 + -0.3 2,325,175 + +2.2 2,325,175 + -0.1 2,325,175 + +1.0 2,325,175 + -1.5 2,325,175 + +0.8 2,325,175 + -1.1 2,325,175 + +1.8 2,325,175 + -0.1 2,325,175 + -0.1 2,325,175 + +1.2 2,325,175 + -0.7 2,325,175 + -0.9 2,325,175 + +0.5 2,325,175 + +0.2 2,325,175 + -0.5 2,325,175 + -0.5 2,325,175 + -0.5 2,325,175 + -0.6 2,325,175 + -1.8 2,325,175 + -0.1 2,325,175 + +1.2 2,325,176 - -0.1 2,325,176 - +0.6 2,325,176 - -0.6 2,325,176 - +0.3 2,325,176 - +0.0 2,325,176 - +0.6 2,325,176 - -0.1 2,325,176 - -0.7 2,325,176 - -0.7 2,325,176 - -0.5 2,325,176 - -1.0 2,325,176 - -0.1 2,325,176 - -0.0 2,325,176 - -0.3 2,325,176 - +0.6 2,325,176 - +0.1 2,325,176 - -0.3 2,325,176 - +0.4 2,325,176 - -0.6 2,325,176 - -0.4
Or see this region's nucleotide sequence