Experiment: Cobalt chloride 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1927 and Ga0059261_1928 are separated by 60 nucleotides Ga0059261_1928 and Ga0059261_1929 overlap by 4 nucleotides Ga0059261_1929 and Ga0059261_1930 are separated by 66 nucleotides
Ga0059261_1927: Ga0059261_1927 - hypothetical protein, at 2,035,449 to 2,036,453
_1927
Ga0059261_1928: Ga0059261_1928 - Predicted permeases, at 2,036,514 to 2,037,428
_1928
Ga0059261_1929: Ga0059261_1929 - Putative transmembrane protein (Alph_Pro_TM), at 2,037,425 to 2,038,237
_1929
Ga0059261_1930: Ga0059261_1930 - Predicted ATPase, at 2,038,304 to 2,039,977
_1930
Position (kb)
2036
2037
2038 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.936 kb on - strand, within Ga0059261_1927 at 2035.936 kb on - strand, within Ga0059261_1927 at 2035.936 kb on - strand, within Ga0059261_1927 at 2036.124 kb on + strand, within Ga0059261_1927 at 2036.125 kb on - strand, within Ga0059261_1927 at 2036.125 kb on - strand, within Ga0059261_1927 at 2036.125 kb on - strand, within Ga0059261_1927 at 2036.163 kb on + strand, within Ga0059261_1927 at 2036.163 kb on + strand, within Ga0059261_1927 at 2036.163 kb on + strand, within Ga0059261_1927 at 2036.164 kb on - strand, within Ga0059261_1927 at 2036.452 kb on - strand at 2036.499 kb on - strand at 2036.499 kb on - strand at 2036.523 kb on + strand at 2036.523 kb on + strand at 2036.523 kb on + strand at 2036.756 kb on + strand, within Ga0059261_1928 at 2036.756 kb on + strand at 2036.756 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.866 kb on - strand, within Ga0059261_1928 at 2037.012 kb on + strand, within Ga0059261_1928 at 2037.027 kb on + strand, within Ga0059261_1928 at 2037.027 kb on + strand, within Ga0059261_1928 at 2037.028 kb on - strand, within Ga0059261_1928 at 2037.028 kb on - strand, within Ga0059261_1928 at 2037.130 kb on - strand, within Ga0059261_1928 at 2037.130 kb on - strand, within Ga0059261_1928 at 2037.130 kb on - strand, within Ga0059261_1928 at 2037.576 kb on - strand, within Ga0059261_1929 at 2037.576 kb on - strand, within Ga0059261_1929 at 2037.779 kb on + strand, within Ga0059261_1929 at 2037.779 kb on + strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand at 2037.839 kb on + strand, within Ga0059261_1929 at 2037.839 kb on + strand, within Ga0059261_1929 at 2037.839 kb on + strand, within Ga0059261_1929 at 2037.840 kb on - strand, within Ga0059261_1929 at 2037.840 kb on - strand, within Ga0059261_1929 at 2037.950 kb on + strand, within Ga0059261_1929 at 2037.950 kb on + strand, within Ga0059261_1929 at 2037.953 kb on + strand, within Ga0059261_1929 at 2037.953 kb on + strand, within Ga0059261_1929 at 2037.953 kb on + strand, within Ga0059261_1929 at 2037.954 kb on - strand, within Ga0059261_1929 at 2037.954 kb on - strand, within Ga0059261_1929 at 2038.092 kb on + strand, within Ga0059261_1929 at 2038.166 kb on + strand at 2038.166 kb on + strand at 2038.235 kb on + strand at 2038.257 kb on + strand at 2038.257 kb on + strand at 2038.257 kb on + strand at 2038.258 kb on - strand at 2038.273 kb on + strand at 2038.273 kb on + strand at 2038.273 kb on + strand at 2038.273 kb on + strand at 2038.274 kb on - strand at 2038.387 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.04 mM remove 2,035,935 + Ga0059261_1927 0.48 -1.3 2,035,935 + Ga0059261_1927 0.48 -0.1 2,035,935 + Ga0059261_1927 0.48 -2.0 2,035,935 + Ga0059261_1927 0.48 -0.6 2,035,935 + Ga0059261_1927 0.48 -0.3 2,035,935 + Ga0059261_1927 0.48 -0.1 2,035,936 - Ga0059261_1927 0.48 +0.4 2,035,936 - Ga0059261_1927 0.48 -0.1 2,035,936 - Ga0059261_1927 0.48 -0.5 2,036,124 + Ga0059261_1927 0.67 -0.0 2,036,125 - Ga0059261_1927 0.67 -0.1 2,036,125 - Ga0059261_1927 0.67 +0.5 2,036,125 - Ga0059261_1927 0.67 -0.4 2,036,163 + Ga0059261_1927 0.71 -0.1 2,036,163 + Ga0059261_1927 0.71 +0.1 2,036,163 + Ga0059261_1927 0.71 -0.4 2,036,164 - Ga0059261_1927 0.71 -0.4 2,036,452 - +0.4 2,036,499 - +0.6 2,036,499 - -0.1 2,036,523 + +0.1 2,036,523 + -1.1 2,036,523 + -1.1 2,036,756 + Ga0059261_1928 0.26 -0.1 2,036,756 + -1.4 2,036,756 + Ga0059261_1928 0.26 -1.4 2,036,865 + Ga0059261_1928 0.38 -0.5 2,036,865 + Ga0059261_1928 0.38 +0.2 2,036,865 + Ga0059261_1928 0.38 -1.0 2,036,865 + Ga0059261_1928 0.38 -1.9 2,036,866 - Ga0059261_1928 0.38 -0.2 2,037,012 + Ga0059261_1928 0.54 -1.4 2,037,027 + Ga0059261_1928 0.56 +0.3 2,037,027 + Ga0059261_1928 0.56 -0.1 2,037,028 - Ga0059261_1928 0.56 -1.4 2,037,028 - Ga0059261_1928 0.56 -1.1 2,037,130 - Ga0059261_1928 0.67 -0.4 2,037,130 - Ga0059261_1928 0.67 -0.5 2,037,130 - Ga0059261_1928 0.67 -0.4 2,037,576 - Ga0059261_1929 0.19 +0.2 2,037,576 - Ga0059261_1929 0.19 +0.3 2,037,779 + Ga0059261_1929 0.44 -1.6 2,037,779 + Ga0059261_1929 0.44 -0.8 2,037,780 - Ga0059261_1929 0.44 -0.9 2,037,780 - Ga0059261_1929 0.44 -1.7 2,037,780 - Ga0059261_1929 0.44 +1.0 2,037,780 - Ga0059261_1929 0.44 -3.1 2,037,780 - Ga0059261_1929 0.44 -0.6 2,037,780 - Ga0059261_1929 0.44 -0.1 2,037,780 - -0.4 2,037,839 + Ga0059261_1929 0.51 -1.0 2,037,839 + Ga0059261_1929 0.51 -0.8 2,037,839 + Ga0059261_1929 0.51 -0.2 2,037,840 - Ga0059261_1929 0.51 -0.0 2,037,840 - Ga0059261_1929 0.51 -1.1 2,037,950 + Ga0059261_1929 0.65 +0.2 2,037,950 + Ga0059261_1929 0.65 -0.2 2,037,953 + Ga0059261_1929 0.65 -0.7 2,037,953 + Ga0059261_1929 0.65 -0.1 2,037,953 + Ga0059261_1929 0.65 +0.2 2,037,954 - Ga0059261_1929 0.65 -0.5 2,037,954 - Ga0059261_1929 0.65 +0.8 2,038,092 + Ga0059261_1929 0.82 -1.3 2,038,166 + -0.8 2,038,166 + -0.6 2,038,235 + -0.3 2,038,257 + +0.1 2,038,257 + +0.1 2,038,257 + -0.6 2,038,258 - -1.0 2,038,273 + +0.3 2,038,273 + -0.3 2,038,273 + +0.2 2,038,273 + -0.1 2,038,274 - +0.6 2,038,387 + -0.1
Or see this region's nucleotide sequence