Experiment: Cobalt chloride 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1793 and Ga0059261_1794 overlap by 54 nucleotides Ga0059261_1794 and Ga0059261_1795 are separated by 134 nucleotides Ga0059261_1795 and Ga0059261_1796 are separated by 58 nucleotides
Ga0059261_1793: Ga0059261_1793 - Site-specific recombinases, DNA invertase Pin homologs, at 1,903,509 to 1,905,155
_1793
Ga0059261_1794: Ga0059261_1794 - tRNA, at 1,905,102 to 1,905,188
_1794
Ga0059261_1795: Ga0059261_1795 - Predicted nucleoside-diphosphate-sugar epimerases, at 1,905,323 to 1,906,255
_1795
Ga0059261_1796: Ga0059261_1796 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 1,906,314 to 1,907,114
_1796
Position (kb)
1905
1906
1907 Strain fitness (log2 ratio)
-1
0
1 at 1904.395 kb on + strand at 1904.411 kb on - strand, within Ga0059261_1793 at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.297 kb on + strand at 1905.298 kb on - strand at 1905.374 kb on + strand at 1905.374 kb on + strand at 1905.374 kb on + strand at 1905.375 kb on - strand at 1905.595 kb on + strand, within Ga0059261_1795 at 1905.695 kb on + strand, within Ga0059261_1795 at 1905.695 kb on + strand, within Ga0059261_1795 at 1905.696 kb on - strand, within Ga0059261_1795 at 1905.875 kb on + strand, within Ga0059261_1795 at 1905.875 kb on + strand, within Ga0059261_1795 at 1905.875 kb on + strand, within Ga0059261_1795 at 1905.875 kb on + strand, within Ga0059261_1795 at 1905.875 kb on + strand, within Ga0059261_1795 at 1905.900 kb on + strand, within Ga0059261_1795 at 1905.900 kb on + strand, within Ga0059261_1795 at 1906.211 kb on + strand at 1906.211 kb on + strand at 1906.211 kb on + strand at 1906.212 kb on - strand at 1907.196 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.04 mM remove 1,904,395 + +0.8 1,904,411 - Ga0059261_1793 0.55 +1.0 1,905,297 + -0.1 1,905,297 + +0.6 1,905,297 + -1.3 1,905,297 + +0.1 1,905,297 + -0.8 1,905,297 + -0.4 1,905,297 + +0.2 1,905,297 + +0.8 1,905,298 - -0.6 1,905,374 + +0.8 1,905,374 + +0.2 1,905,374 + +0.0 1,905,375 - -1.1 1,905,595 + Ga0059261_1795 0.29 -1.2 1,905,695 + Ga0059261_1795 0.40 -1.3 1,905,695 + Ga0059261_1795 0.40 -0.3 1,905,696 - Ga0059261_1795 0.40 -0.3 1,905,875 + Ga0059261_1795 0.59 -0.4 1,905,875 + Ga0059261_1795 0.59 -0.1 1,905,875 + Ga0059261_1795 0.59 -0.4 1,905,875 + Ga0059261_1795 0.59 -0.8 1,905,875 + Ga0059261_1795 0.59 -0.8 1,905,900 + Ga0059261_1795 0.62 -0.0 1,905,900 + Ga0059261_1795 0.62 -0.1 1,906,211 + -0.6 1,906,211 + -1.0 1,906,211 + +0.3 1,906,212 - +0.0 1,907,196 - -0.2
Or see this region's nucleotide sequence