Experiment: Cobalt chloride 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1782 and Ga0059261_1783 are separated by 68 nucleotides Ga0059261_1783 and Ga0059261_1784 are separated by 382 nucleotides Ga0059261_1784 and Ga0059261_1785 overlap by 1755 nucleotides Ga0059261_1785 and Ga0059261_1786 are separated by 450 nucleotides Ga0059261_1786 and Ga0059261_1787 overlap by 4 nucleotides
Ga0059261_1782: Ga0059261_1782 - Transposase DDE domain, at 1,893,238 to 1,893,516
_1782
Ga0059261_1783: Ga0059261_1783 - Transposase and inactivated derivatives, at 1,893,585 to 1,894,004
_1783
Ga0059261_1784: Ga0059261_1784 - Transcriptional regulator, at 1,894,387 to 1,896,950
_1784
Ga0059261_1785: Ga0059261_1785 - Transposase DDE domain group 1, at 1,895,196 to 1,896,566
_1785
Ga0059261_1786: Ga0059261_1786 - hypothetical protein, at 1,897,017 to 1,897,376
_1786
Ga0059261_1787: Ga0059261_1787 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,897,373 to 1,898,161
_1787
Position (kb) 1894
1895
1896
1897 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1893.444 kb on + strand, within Ga0059261_1782 at 1893.444 kb on + strand, within Ga0059261_1782 at 1893.445 kb on - strand, within Ga0059261_1782 at 1893.497 kb on + strand at 1893.497 kb on + strand at 1893.497 kb on + strand at 1893.497 kb on + strand at 1893.498 kb on - strand at 1893.549 kb on + strand at 1893.549 kb on + strand at 1893.823 kb on + strand, within Ga0059261_1783 at 1893.823 kb on + strand, within Ga0059261_1783 at 1893.823 kb on + strand, within Ga0059261_1783 at 1893.823 kb on + strand, within Ga0059261_1783 at 1893.823 kb on + strand, within Ga0059261_1783 at 1893.823 kb on + strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.824 kb on - strand, within Ga0059261_1783 at 1893.845 kb on - strand, within Ga0059261_1783 at 1893.994 kb on + strand at 1893.995 kb on - strand at 1894.201 kb on - strand at 1894.201 kb on - strand at 1894.222 kb on + strand at 1894.222 kb on + strand at 1894.222 kb on + strand at 1894.222 kb on + strand at 1894.222 kb on + strand at 1894.222 kb on + strand at 1894.223 kb on - strand at 1894.223 kb on - strand at 1894.223 kb on - strand at 1894.245 kb on + strand at 1894.246 kb on - strand at 1894.246 kb on - strand at 1894.246 kb on - strand at 1894.260 kb on + strand at 1894.260 kb on + strand at 1894.260 kb on + strand at 1894.260 kb on + strand at 1894.260 kb on + strand at 1894.261 kb on - strand at 1894.261 kb on - strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.292 kb on + strand at 1894.293 kb on - strand at 1894.293 kb on - strand at 1894.293 kb on - strand at 1894.293 kb on - strand at 1894.293 kb on - strand at 1894.293 kb on - strand at 1894.293 kb on - strand at 1894.324 kb on + strand at 1894.346 kb on + strand at 1894.346 kb on + strand at 1894.346 kb on + strand at 1894.346 kb on + strand at 1894.347 kb on - strand at 1894.348 kb on + strand at 1894.348 kb on + strand at 1894.348 kb on + strand at 1894.349 kb on - strand at 1894.349 kb on - strand at 1894.349 kb on - strand at 1894.470 kb on + strand at 1894.471 kb on - strand at 1894.475 kb on + strand at 1894.475 kb on + strand at 1894.475 kb on + strand at 1894.476 kb on - strand at 1894.476 kb on - strand at 1894.476 kb on - strand at 1894.476 kb on - strand at 1894.476 kb on - strand at 1894.478 kb on + strand at 1894.478 kb on + strand at 1894.478 kb on + strand at 1894.478 kb on + strand at 1894.479 kb on - strand at 1894.479 kb on - strand at 1894.479 kb on - strand at 1894.479 kb on - strand at 1894.479 kb on - strand at 1894.479 kb on - strand at 1894.574 kb on + strand at 1894.575 kb on - strand at 1894.693 kb on + strand, within Ga0059261_1784 at 1894.693 kb on + strand, within Ga0059261_1784 at 1894.693 kb on + strand, within Ga0059261_1784 at 1894.694 kb on - strand, within Ga0059261_1784 at 1894.694 kb on - strand, within Ga0059261_1784 at 1894.730 kb on + strand, within Ga0059261_1784 at 1894.730 kb on + strand, within Ga0059261_1784 at 1894.730 kb on + strand, within Ga0059261_1784 at 1894.730 kb on + strand, within Ga0059261_1784 at 1894.730 kb on + strand, within Ga0059261_1784 at 1894.731 kb on - strand, within Ga0059261_1784 at 1894.731 kb on - strand, within Ga0059261_1784 at 1894.731 kb on - strand, within Ga0059261_1784 at 1894.731 kb on - strand, within Ga0059261_1784 at 1894.803 kb on + strand, within Ga0059261_1784 at 1894.804 kb on - strand, within Ga0059261_1784 at 1894.804 kb on - strand, within Ga0059261_1784 at 1894.804 kb on - strand, within Ga0059261_1784 at 1894.804 kb on - strand, within Ga0059261_1784 at 1894.926 kb on + strand, within Ga0059261_1784 at 1894.926 kb on + strand, within Ga0059261_1784 at 1894.927 kb on - strand, within Ga0059261_1784 at 1894.941 kb on - strand, within Ga0059261_1784 at 1894.941 kb on - strand, within Ga0059261_1784 at 1894.952 kb on + strand, within Ga0059261_1784 at 1894.952 kb on + strand, within Ga0059261_1784 at 1894.952 kb on + strand, within Ga0059261_1784 at 1894.952 kb on + strand, within Ga0059261_1784 at 1894.952 kb on + strand, within Ga0059261_1784 at 1894.952 kb on + strand, within Ga0059261_1784 at 1894.953 kb on - strand at 1894.953 kb on - strand, within Ga0059261_1784 at 1894.953 kb on - strand, within Ga0059261_1784 at 1894.953 kb on - strand, within Ga0059261_1784 at 1894.953 kb on - strand, within Ga0059261_1784 at 1894.953 kb on - strand, within Ga0059261_1784 at 1894.953 kb on - strand, within Ga0059261_1784 at 1895.073 kb on - strand, within Ga0059261_1784 at 1895.096 kb on - strand, within Ga0059261_1784 at 1896.727 kb on + strand at 1896.737 kb on + strand at 1896.737 kb on + strand at 1896.788 kb on + strand at 1896.789 kb on - strand at 1896.799 kb on - strand at 1896.952 kb on - strand at 1896.968 kb on + strand at 1896.968 kb on + strand at 1896.992 kb on + strand at 1897.014 kb on + strand at 1897.015 kb on - strand at 1897.060 kb on + strand, within Ga0059261_1786 at 1897.060 kb on + strand, within Ga0059261_1786 at 1897.060 kb on + strand, within Ga0059261_1786 at 1897.061 kb on - strand, within Ga0059261_1786 at 1897.061 kb on - strand, within Ga0059261_1786 at 1897.061 kb on - strand, within Ga0059261_1786 at 1897.080 kb on + strand, within Ga0059261_1786 at 1897.081 kb on - strand at 1897.081 kb on - strand at 1897.154 kb on + strand, within Ga0059261_1786 at 1897.231 kb on - strand, within Ga0059261_1786 at 1897.323 kb on + strand, within Ga0059261_1786 at 1897.323 kb on + strand, within Ga0059261_1786 at 1897.323 kb on + strand, within Ga0059261_1786 at 1897.324 kb on - strand, within Ga0059261_1786 at 1897.324 kb on - strand, within Ga0059261_1786 at 1897.372 kb on + strand at 1897.372 kb on + strand at 1897.372 kb on + strand at 1897.372 kb on + strand at 1897.373 kb on - strand at 1897.373 kb on - strand at 1897.373 kb on - strand at 1897.373 kb on - strand at 1897.535 kb on + strand, within Ga0059261_1787 at 1897.535 kb on + strand, within Ga0059261_1787 at 1897.535 kb on + strand, within Ga0059261_1787 at 1897.535 kb on + strand, within Ga0059261_1787 at 1897.535 kb on + strand, within Ga0059261_1787 at 1897.535 kb on + strand, within Ga0059261_1787 at 1897.535 kb on + strand at 1897.536 kb on - strand, within Ga0059261_1787 at 1897.536 kb on - strand, within Ga0059261_1787 at 1897.536 kb on - strand, within Ga0059261_1787 at 1897.536 kb on - strand, within Ga0059261_1787 at 1897.653 kb on + strand, within Ga0059261_1787 at 1897.654 kb on - strand, within Ga0059261_1787 at 1897.832 kb on + strand at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.862 kb on + strand at 1897.862 kb on + strand, within Ga0059261_1787 at 1897.863 kb on - strand, within Ga0059261_1787
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.04 mM remove 1,893,444 + Ga0059261_1782 0.74 -0.1 1,893,444 + Ga0059261_1782 0.74 +0.2 1,893,445 - Ga0059261_1782 0.74 -0.4 1,893,497 + +0.1 1,893,497 + -0.1 1,893,497 + -0.2 1,893,497 + -0.3 1,893,498 - -0.1 1,893,549 + +0.8 1,893,549 + +0.3 1,893,823 + Ga0059261_1783 0.57 +1.3 1,893,823 + Ga0059261_1783 0.57 -1.0 1,893,823 + Ga0059261_1783 0.57 +0.7 1,893,823 + Ga0059261_1783 0.57 +0.4 1,893,823 + Ga0059261_1783 0.57 +0.5 1,893,823 + Ga0059261_1783 0.57 -0.1 1,893,824 - Ga0059261_1783 0.57 +0.5 1,893,824 - Ga0059261_1783 0.57 -1.0 1,893,824 - Ga0059261_1783 0.57 +0.3 1,893,824 - Ga0059261_1783 0.57 -0.6 1,893,824 - Ga0059261_1783 0.57 -0.2 1,893,824 - Ga0059261_1783 0.57 -0.4 1,893,824 - Ga0059261_1783 0.57 -0.3 1,893,824 - Ga0059261_1783 0.57 +0.3 1,893,824 - Ga0059261_1783 0.57 +1.0 1,893,845 - Ga0059261_1783 0.62 -0.3 1,893,994 + -0.3 1,893,995 - -1.8 1,894,201 - +1.0 1,894,201 - -0.1 1,894,222 + -0.8 1,894,222 + +0.1 1,894,222 + -1.0 1,894,222 + -0.4 1,894,222 + -0.6 1,894,222 + -1.2 1,894,223 - +0.2 1,894,223 - +0.0 1,894,223 - -2.7 1,894,245 + +1.3 1,894,246 - +0.3 1,894,246 - +0.7 1,894,246 - +1.0 1,894,260 + -0.3 1,894,260 + -0.2 1,894,260 + +1.4 1,894,260 + -2.0 1,894,260 + -0.1 1,894,261 - -0.1 1,894,261 - -1.2 1,894,292 + -0.2 1,894,292 + -0.4 1,894,292 + +0.6 1,894,292 + +0.1 1,894,292 + +0.3 1,894,292 + -0.7 1,894,292 + +0.1 1,894,292 + -0.2 1,894,293 - -0.3 1,894,293 - +0.2 1,894,293 - +0.5 1,894,293 - -0.3 1,894,293 - -0.2 1,894,293 - -0.2 1,894,293 - -0.5 1,894,324 + -0.2 1,894,346 + +0.4 1,894,346 + +0.5 1,894,346 + -0.1 1,894,346 + -0.5 1,894,347 - -1.0 1,894,348 + +1.9 1,894,348 + +0.6 1,894,348 + -0.2 1,894,349 - +0.6 1,894,349 - +0.4 1,894,349 - -0.4 1,894,470 + -0.8 1,894,471 - -0.3 1,894,475 + +1.0 1,894,475 + -1.0 1,894,475 + -0.6 1,894,476 - +0.3 1,894,476 - -2.3 1,894,476 - -0.3 1,894,476 - +0.1 1,894,476 - +1.2 1,894,478 + -0.1 1,894,478 + -0.3 1,894,478 + +0.3 1,894,478 + -0.1 1,894,479 - -0.2 1,894,479 - -0.5 1,894,479 - +0.6 1,894,479 - -0.6 1,894,479 - -0.0 1,894,479 - +0.6 1,894,574 + -0.3 1,894,575 - +0.5 1,894,693 + Ga0059261_1784 0.12 +0.6 1,894,693 + Ga0059261_1784 0.12 -0.1 1,894,693 + Ga0059261_1784 0.12 +1.1 1,894,694 - Ga0059261_1784 0.12 +0.3 1,894,694 - Ga0059261_1784 0.12 -0.2 1,894,730 + Ga0059261_1784 0.13 -0.1 1,894,730 + Ga0059261_1784 0.13 +0.6 1,894,730 + Ga0059261_1784 0.13 -0.1 1,894,730 + Ga0059261_1784 0.13 +0.0 1,894,730 + Ga0059261_1784 0.13 +0.1 1,894,731 - Ga0059261_1784 0.13 +0.7 1,894,731 - Ga0059261_1784 0.13 +0.3 1,894,731 - Ga0059261_1784 0.13 +0.3 1,894,731 - Ga0059261_1784 0.13 +0.8 1,894,803 + Ga0059261_1784 0.16 +0.0 1,894,804 - Ga0059261_1784 0.16 +0.1 1,894,804 - Ga0059261_1784 0.16 -0.7 1,894,804 - Ga0059261_1784 0.16 +0.1 1,894,804 - Ga0059261_1784 0.16 -0.1 1,894,926 + Ga0059261_1784 0.21 +0.9 1,894,926 + Ga0059261_1784 0.21 +0.7 1,894,927 - Ga0059261_1784 0.21 -0.2 1,894,941 - Ga0059261_1784 0.22 -0.2 1,894,941 - Ga0059261_1784 0.22 -0.1 1,894,952 + Ga0059261_1784 0.22 -0.2 1,894,952 + Ga0059261_1784 0.22 +0.2 1,894,952 + Ga0059261_1784 0.22 +0.5 1,894,952 + Ga0059261_1784 0.22 -1.0 1,894,952 + Ga0059261_1784 0.22 +0.8 1,894,952 + Ga0059261_1784 0.22 -0.1 1,894,953 - +0.2 1,894,953 - Ga0059261_1784 0.22 +0.3 1,894,953 - Ga0059261_1784 0.22 +0.4 1,894,953 - Ga0059261_1784 0.22 -0.8 1,894,953 - Ga0059261_1784 0.22 -0.1 1,894,953 - Ga0059261_1784 0.22 +0.8 1,894,953 - Ga0059261_1784 0.22 +0.2 1,895,073 - Ga0059261_1784 0.27 -2.1 1,895,096 - Ga0059261_1784 0.28 +0.5 1,896,727 + -1.9 1,896,737 + -1.8 1,896,737 + -0.3 1,896,788 + -0.7 1,896,789 - +0.1 1,896,799 - +0.1 1,896,952 - +0.6 1,896,968 + +1.4 1,896,968 + -0.7 1,896,992 + +1.3 1,897,014 + +0.3 1,897,015 - -0.4 1,897,060 + Ga0059261_1786 0.12 +0.3 1,897,060 + Ga0059261_1786 0.12 +0.8 1,897,060 + Ga0059261_1786 0.12 -0.2 1,897,061 - Ga0059261_1786 0.12 -0.7 1,897,061 - Ga0059261_1786 0.12 -0.0 1,897,061 - Ga0059261_1786 0.12 -0.1 1,897,080 + Ga0059261_1786 0.17 -0.4 1,897,081 - +1.2 1,897,081 - -0.4 1,897,154 + Ga0059261_1786 0.38 +0.1 1,897,231 - Ga0059261_1786 0.59 -0.0 1,897,323 + Ga0059261_1786 0.85 -1.6 1,897,323 + Ga0059261_1786 0.85 +0.2 1,897,323 + Ga0059261_1786 0.85 +0.5 1,897,324 - Ga0059261_1786 0.85 +0.1 1,897,324 - Ga0059261_1786 0.85 -0.6 1,897,372 + +0.3 1,897,372 + +0.4 1,897,372 + -0.2 1,897,372 + +0.1 1,897,373 - -0.6 1,897,373 - +0.6 1,897,373 - +0.3 1,897,373 - -0.4 1,897,535 + Ga0059261_1787 0.21 +0.3 1,897,535 + Ga0059261_1787 0.21 +0.4 1,897,535 + Ga0059261_1787 0.21 +0.3 1,897,535 + Ga0059261_1787 0.21 -0.4 1,897,535 + Ga0059261_1787 0.21 +0.1 1,897,535 + Ga0059261_1787 0.21 -0.2 1,897,535 + +0.0 1,897,536 - Ga0059261_1787 0.21 +0.3 1,897,536 - Ga0059261_1787 0.21 -0.0 1,897,536 - Ga0059261_1787 0.21 -0.4 1,897,536 - Ga0059261_1787 0.21 +0.1 1,897,653 + Ga0059261_1787 0.35 +0.5 1,897,654 - Ga0059261_1787 0.36 +0.4 1,897,832 + +2.2 1,897,862 + Ga0059261_1787 0.62 +0.3 1,897,862 + Ga0059261_1787 0.62 +0.7 1,897,862 + Ga0059261_1787 0.62 -0.2 1,897,862 + Ga0059261_1787 0.62 +0.0 1,897,862 + Ga0059261_1787 0.62 +0.0 1,897,862 + Ga0059261_1787 0.62 +0.7 1,897,862 + Ga0059261_1787 0.62 -0.2 1,897,862 + -0.8 1,897,862 + Ga0059261_1787 0.62 +0.1 1,897,863 - Ga0059261_1787 0.62 -0.1
Or see this region's nucleotide sequence