Experiment: Cobalt chloride 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0661 and Ga0059261_0662 are separated by 89 nucleotides Ga0059261_0662 and Ga0059261_0663 overlap by 4 nucleotides Ga0059261_0663 and Ga0059261_0664 are separated by 120 nucleotides Ga0059261_0664 and Ga0059261_0665 are separated by 80 nucleotides
Ga0059261_0661: Ga0059261_0661 - hypothetical protein, at 701,117 to 701,263
_0661
Ga0059261_0662: Ga0059261_0662 - Truncated hemoglobins, at 701,353 to 701,769
_0662
Ga0059261_0663: Ga0059261_0663 - Prokaryotic homologs of the JAB domain, at 701,766 to 702,068
_0663
Ga0059261_0664: Ga0059261_0664 - pseudouridine synthase, RluA family, at 702,189 to 703,142
_0664
Ga0059261_0665: Ga0059261_0665 - alternative sigma factor RpoH, at 703,223 to 704,128
_0665
Position (kb)
702
703
704 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 701.279 kb on - strand at 701.279 kb on - strand at 701.279 kb on - strand at 701.291 kb on - strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.361 kb on + strand at 701.361 kb on + strand at 701.361 kb on + strand at 701.362 kb on - strand at 701.362 kb on - strand at 701.362 kb on - strand at 701.434 kb on + strand, within Ga0059261_0662 at 701.435 kb on - strand, within Ga0059261_0662 at 701.435 kb on - strand, within Ga0059261_0662 at 701.435 kb on - strand, within Ga0059261_0662 at 701.557 kb on + strand, within Ga0059261_0662 at 701.557 kb on + strand, within Ga0059261_0662 at 701.557 kb on + strand, within Ga0059261_0662 at 701.767 kb on + strand at 701.768 kb on - strand at 701.768 kb on - strand at 702.182 kb on + strand at 702.182 kb on + strand at 702.182 kb on + strand at 702.183 kb on - strand at 702.183 kb on - strand at 702.211 kb on + strand at 702.211 kb on + strand at 702.211 kb on + strand at 702.212 kb on - strand at 702.212 kb on - strand at 702.715 kb on - strand, within Ga0059261_0664 at 702.920 kb on - strand, within Ga0059261_0664 at 703.033 kb on + strand, within Ga0059261_0664 at 703.033 kb on + strand, within Ga0059261_0664 at 703.033 kb on + strand, within Ga0059261_0664 at 703.034 kb on - strand, within Ga0059261_0664 at 703.066 kb on + strand at 703.066 kb on + strand at 703.066 kb on + strand at 703.066 kb on + strand at 703.067 kb on - strand at 703.138 kb on + strand at 703.140 kb on + strand at 703.140 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.04 mM remove 701,279 - -0.0 701,279 - +2.3 701,279 - -0.1 701,291 - +0.3 701,350 + +0.3 701,350 + +0.1 701,350 + +0.4 701,350 + -0.6 701,350 + -0.5 701,350 + +1.1 701,350 + +0.6 701,350 + -0.1 701,350 + +0.4 701,350 + +0.8 701,351 - +0.2 701,351 - +0.7 701,351 - +0.5 701,351 - -0.2 701,351 - +0.0 701,351 - +0.0 701,351 - +0.4 701,351 - -0.0 701,351 - -0.2 701,361 + +1.0 701,361 + +0.1 701,361 + -0.1 701,362 - +0.8 701,362 - -0.2 701,362 - +0.1 701,434 + Ga0059261_0662 0.19 -0.3 701,435 - Ga0059261_0662 0.20 +0.2 701,435 - Ga0059261_0662 0.20 -0.0 701,435 - Ga0059261_0662 0.20 -0.8 701,557 + Ga0059261_0662 0.49 +0.3 701,557 + Ga0059261_0662 0.49 -0.4 701,557 + Ga0059261_0662 0.49 -0.9 701,767 + -0.1 701,768 - -0.3 701,768 - +0.2 702,182 + +0.0 702,182 + +0.4 702,182 + +0.1 702,183 - -1.8 702,183 - -2.2 702,211 + -0.4 702,211 + -1.0 702,211 + +0.1 702,212 - -0.2 702,212 - -0.4 702,715 - Ga0059261_0664 0.55 +1.1 702,920 - Ga0059261_0664 0.77 +0.1 703,033 + Ga0059261_0664 0.88 -0.7 703,033 + Ga0059261_0664 0.88 -1.2 703,033 + Ga0059261_0664 0.88 -1.5 703,034 - Ga0059261_0664 0.89 -0.3 703,066 + -0.7 703,066 + -2.1 703,066 + +0.6 703,066 + -2.5 703,067 - -2.4 703,138 + -0.1 703,140 + -0.3 703,140 + -0.4
Or see this region's nucleotide sequence