Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03093

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
3,241,240	-		CCNA_03092	0.32	-1.0
3,241,240	-		CCNA_03092	0.32	-1.0
3,241,247	+		CCNA_03092	0.32	-0.4
3,241,247	+		CCNA_03092	0.32	-1.9
3,241,247	+		CCNA_03092	0.32	-1.4
3,241,247	+		CCNA_03092	0.32	+0.1
3,241,247	+		CCNA_03092	0.32	+0.4
3,241,254	+		CCNA_03092	0.33	-0.5
3,241,262	-		CCNA_03092	0.33	+0.8
3,241,262	-		CCNA_03092	0.33	+0.2
3,241,264	+		CCNA_03092	0.34	-2.0
3,241,281	+		CCNA_03092	0.35	+0.5
3,241,286	-		CCNA_03092	0.35	-0.6
3,241,288	+		CCNA_03092	0.35	-0.6
3,241,289	-		CCNA_03092	0.35	-0.7
3,241,317	-		CCNA_03092	0.37	+0.4
3,241,333	+		CCNA_03092	0.39	+0.2
3,241,333	+		CCNA_03092	0.39	-0.9
3,241,341	-		CCNA_03092	0.39	-0.6
3,241,341	-		CCNA_03092	0.39	-3.0
3,241,360	+		CCNA_03092	0.41	-0.8
3,241,368	+		CCNA_03092	0.41	-0.4
3,241,369	+		CCNA_03092	0.41	+0.9
3,241,457	-		CCNA_03092	0.48	+0.4
3,241,480	-		CCNA_03092	0.49	-1.1
3,241,496	+		CCNA_03092	0.50	+0.6
3,241,504	-		CCNA_03092	0.51	+1.1
3,241,504	-		CCNA_03092	0.51	-0.7
3,241,518	+		CCNA_03092	0.52	-0.1
3,241,518	+		CCNA_03092	0.52	+0.4
3,241,518	+		CCNA_03092	0.52	-0.5
3,241,518	+		CCNA_03092	0.52	+0.3
3,241,518	+		CCNA_03092	0.52	-0.4
3,241,526	-		CCNA_03092	0.53	+0.8
3,241,587	-		CCNA_03092	0.57	-0.5
3,241,589	+		CCNA_03092	0.57	-0.7
3,241,589	+		CCNA_03092	0.57	-0.5
3,241,589	+		CCNA_03092	0.57	+1.4
3,241,589	+		CCNA_03092	0.57	-0.4
3,241,589	+		CCNA_03092	0.57	-0.2
3,241,589	+		CCNA_03092	0.57	+0.4
3,241,589	+		CCNA_03092	0.57	+0.2
3,241,597	-		CCNA_03092	0.58	+0.4
3,241,597	-		CCNA_03092	0.58	-0.2
3,241,597	-		CCNA_03092	0.58	+0.9
3,241,597	-		CCNA_03092	0.58	-0.1
3,241,624	+		CCNA_03092	0.60	-0.6
3,241,624	+		CCNA_03092	0.60	-1.4
3,241,637	+		CCNA_03092	0.61	+0.8
3,241,637	+		CCNA_03092	0.61	+1.3
3,241,637	+		CCNA_03092	0.61	-1.4
3,241,637	+		CCNA_03092	0.61	+0.1
3,241,645	-		CCNA_03092	0.61	-1.4
3,241,645	-		CCNA_03092	0.61	+0.8
3,241,645	-		CCNA_03092	0.61	-1.3
3,241,685	+		CCNA_03092	0.64	-0.7
3,241,693	-		CCNA_03092	0.65	+1.4
3,241,698	+		CCNA_03092	0.65	-0.7
3,241,705	-		CCNA_03092	0.66	-0.4
3,241,730	-		CCNA_03092	0.67	-2.0
3,241,760	+		CCNA_03092	0.70	-0.7
3,241,767	+		CCNA_03092	0.70	+0.9
3,241,772	+		CCNA_03092	0.71	+1.1
3,241,780	-		CCNA_03092	0.71	-1.9
3,241,780	-		CCNA_03092	0.71	+0.8
3,241,790	+		CCNA_03092	0.72	+1.8
3,241,813	+		CCNA_03092	0.73	+0.0
3,241,828	+		CCNA_03092	0.75	+0.1
3,241,839	+		CCNA_03092	0.75	-0.1
3,241,839	+		CCNA_03092	0.75	-0.4
3,241,839	+		CCNA_03092	0.75	-0.6
3,241,839	+		CCNA_03092	0.75	+0.7
3,241,839	+		CCNA_03092	0.75	-0.6
3,241,839	+		CCNA_03092	0.75	+0.8
3,241,839	+		CCNA_03092	0.75	+2.3
3,241,847	-		CCNA_03092	0.76	+1.0
3,241,847	-		CCNA_03092	0.76	-2.3
3,241,847	-		CCNA_03092	0.76	-1.1
3,241,847	-		CCNA_03092	0.76	-1.5
3,241,847	-				+1.4
3,241,847	-		CCNA_03092	0.76	+1.6
3,241,876	-		CCNA_03092	0.78	+1.6
3,241,876	-		CCNA_03092	0.78	-0.1
3,241,885	-		CCNA_03092	0.79	-0.6
3,241,910	+		CCNA_03092	0.81	+0.1
3,241,958	+		CCNA_03092	0.84	-0.0
3,241,958	+		CCNA_03092	0.84	+0.2
3,241,964	+		CCNA_03092	0.84	+0.2
3,241,966	-		CCNA_03092	0.85	+0.2
3,241,996	+		CCNA_03092	0.87	+1.8
3,241,996	+		CCNA_03092	0.87	+0.4
3,242,004	-		CCNA_03092	0.87	-1.4
3,242,014	+		CCNA_03092	0.88	+2.2
3,242,019	-		CCNA_03092	0.88	-3.2
3,242,026	+		CCNA_03092	0.89	+0.5
3,242,026	+		CCNA_03092	0.89	+1.0
3,242,034	-		CCNA_03092	0.90	-0.6
3,242,034	-		CCNA_03092	0.90	+1.3
3,242,052	+				-0.0
3,242,057	+				+1.2
3,242,075	+				+1.1
3,242,108	+				+1.1
3,242,126	-				+0.1
3,242,128	+				+0.2
3,242,158	+				-0.8
3,242,158	+				+0.5
3,242,177	+				-0.5
3,242,178	+				-0.1
3,242,183	+				+0.2
3,242,183	+				-0.5
3,242,183	+				-0.4
3,242,183	+				+0.1
3,242,183	+				+0.4
3,242,183	+				+0.3
3,242,186	-				-0.6
3,242,190	+				+2.0
3,242,191	-				-0.5
3,242,191	-				-0.8
3,242,191	-				-1.9
3,242,191	-				-0.1
3,242,191	-				+0.4
3,242,191	-				-0.2
3,242,191	-				+0.4
3,242,201	-				+0.9
3,242,222	+				-0.5
3,242,236	+				+0.7
3,242,281	-				+0.1
3,242,281	-				-0.3
3,242,294	+		CCNA_03093	0.13	+1.0
3,242,297	+		CCNA_03093	0.13	+2.7
3,242,297	+		CCNA_03093	0.13	+0.6
3,242,297	+		CCNA_03093	0.13	+0.3
3,242,297	+		CCNA_03093	0.13	+1.1
3,242,297	+		CCNA_03093	0.13	+0.7
3,242,305	-		CCNA_03093	0.15	+1.0
3,242,305	-		CCNA_03093	0.15	+0.1
3,242,305	-		CCNA_03093	0.15	-0.1
3,242,349	-		CCNA_03093	0.26	-1.1
3,242,349	-		CCNA_03093	0.26	+0.9
3,242,351	+		CCNA_03093	0.26	-1.3
3,242,356	+		CCNA_03093	0.27	-1.0
3,242,356	+		CCNA_03093	0.27	-0.2
3,242,356	+		CCNA_03093	0.27	-0.2
3,242,428	-		CCNA_03093	0.44	-0.9
3,242,429	-		CCNA_03093	0.45	+0.6
3,242,434	+		CCNA_03093	0.46	+1.1
3,242,442	-		CCNA_03093	0.48	+1.5
3,242,442	-		CCNA_03093	0.48	-0.1
3,242,446	+		CCNA_03093	0.49	+1.1
3,242,452	-		CCNA_03093	0.50	+0.4
3,242,461	+		CCNA_03093	0.52	+1.1
3,242,475	+		CCNA_03093	0.56	+0.8
3,242,485	+		CCNA_03093	0.58	+0.1
3,242,541	-		CCNA_03093	0.71	-0.8
3,242,567	-		CCNA_03093	0.77	-1.1
3,242,567	-		CCNA_03093	0.77	+1.2
3,242,569	-		CCNA_03093	0.78	+1.8
3,242,589	-		CCNA_03093	0.83	-0.0
3,242,591	+		CCNA_03093	0.83	+0.0
3,242,599	-		CCNA_03093	0.85	+0.8
3,242,661	+				+0.5
3,242,661	+				+1.3
3,242,684	-				+1.1
3,242,685	+				+0.7
3,242,685	+				+0.8
3,242,693	-				-0.8
3,242,713	+				+0.3
3,242,736	+				+0.9
3,242,737	+				+2.0
3,242,837	-				-0.3
3,242,841	-				+1.4
3,242,879	-				+1.4
3,242,939	-				+1.1
3,242,939	-				+0.6
3,242,941	+				-0.2
3,243,018	+		CCNA_03094	0.15	+0.0
3,243,033	+		CCNA_03094	0.16	-0.5
3,243,043	+		CCNA_03094	0.17	-1.4
3,243,051	-		CCNA_03094	0.18	-0.4
3,243,051	-		CCNA_03094	0.18	+1.8
3,243,051	-		CCNA_03094	0.18	+0.9
3,243,131	+		CCNA_03094	0.25	+0.6
3,243,158	+		CCNA_03094	0.28	-0.8
3,243,173	-		CCNA_03094	0.29	+0.2
3,243,178	-		CCNA_03094	0.30	-0.5
3,243,185	-		CCNA_03094	0.30	-0.7
3,243,202	-		CCNA_03094	0.32	-0.4
3,243,231	+		CCNA_03094	0.35	+1.5
3,243,237	+		CCNA_03094	0.35	+0.1
3,243,250	+		CCNA_03094	0.36	-0.4
3,243,250	+		CCNA_03094	0.36	-0.6
3,243,250	+		CCNA_03094	0.36	-2.4
3,243,255	+		CCNA_03094	0.37	+2.2
3,243,258	-		CCNA_03094	0.37	+0.8
3,243,258	-		CCNA_03094	0.37	+0.1
3,243,260	+		CCNA_03094	0.37	+2.2
3,243,268	-		CCNA_03094	0.38	+2.1
3,243,448	-		CCNA_03094	0.55	-0.3
3,243,482	-		CCNA_03094	0.58	+1.3
3,243,521	-		CCNA_03094	0.62	+0.3
3,243,521	-		CCNA_03094	0.62	-0.3
3,243,534	+		CCNA_03094	0.63	+0.2
3,243,540	+		CCNA_03094	0.64	-1.9
3,243,610	+		CCNA_03094	0.70	-1.4
3,243,627	-		CCNA_03094	0.72	-1.2