Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02492

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
2,638,924	+				-0.3
2,638,941	+				-0.9
2,639,028	+				+0.9
2,639,028	+				-0.1
2,639,034	+				-1.3
2,639,036	-				+0.1
2,639,036	-				-1.9
2,639,084	-		CCNA_02491	0.16	+2.3
2,639,088	-		CCNA_02491	0.16	+1.3
2,639,088	-		CCNA_02491	0.16	+0.2
2,639,162	+		CCNA_02491	0.27	+0.7
2,639,162	+		CCNA_02491	0.27	-1.0
2,639,162	+		CCNA_02491	0.27	-1.1
2,639,162	+		CCNA_02491	0.27	-1.4
2,639,162	+		CCNA_02491	0.27	-1.5
2,639,162	+		CCNA_02491	0.27	-0.0
2,639,162	+		CCNA_02491	0.27	-0.6
2,639,162	+		CCNA_02491	0.27	-1.1
2,639,162	+		CCNA_02491	0.27	-1.4
2,639,170	-		CCNA_02491	0.28	-0.3
2,639,232	+		CCNA_02491	0.36	-1.2
2,639,232	+		CCNA_02491	0.36	+0.7
2,639,234	+		CCNA_02491	0.37	+0.2
2,639,242	-		CCNA_02491	0.38	-0.0
2,639,269	-		CCNA_02491	0.42	+0.2
2,639,269	-		CCNA_02491	0.42	-0.8
2,639,295	+		CCNA_02491	0.45	+0.7
2,639,362	-		CCNA_02491	0.55	-1.4
2,639,393	+		CCNA_02491	0.59	+0.6
2,639,465	-		CCNA_02491	0.69	-0.9
2,639,484	+		CCNA_02491	0.72	-1.3
2,639,492	-		CCNA_02491	0.73	-1.7
2,639,492	-		CCNA_02491	0.73	-1.3
2,639,562	+		CCNA_02491	0.83	-2.7
2,639,562	+		CCNA_02491	0.83	+1.7
2,639,597	+		CCNA_02491	0.88	+0.2
2,639,600	+		CCNA_02491	0.88	+0.1
2,639,605	-		CCNA_02491	0.89	-0.8
2,639,605	-		CCNA_02491	0.89	-2.3
2,639,608	-		CCNA_02491	0.90	-1.0
2,639,612	+				-1.0
2,639,612	+				-1.6
2,639,634	-				-1.7
2,639,639	-				+0.7
2,639,641	+				+0.1
2,639,645	+				-1.3
2,639,653	-				-0.8
2,639,668	+				+0.9
2,639,698	-				+0.2
2,639,725	-				+0.8
2,639,761	+		CCNA_02492	0.13	-0.6
2,639,776	-		CCNA_02492	0.16	+0.8
2,639,786	-		CCNA_02492	0.17	-0.2
2,639,786	-		CCNA_02492	0.17	-1.4
2,639,795	-		CCNA_02492	0.19	+0.4
2,639,800	-		CCNA_02492	0.19	+0.3
2,639,800	-		CCNA_02492	0.19	-0.7
2,639,800	-		CCNA_02492	0.19	+0.4
2,639,836	-		CCNA_02492	0.25	-0.7
2,639,838	+		CCNA_02492	0.25	-1.0
2,639,838	+		CCNA_02492	0.25	-0.7
2,639,846	-		CCNA_02492	0.26	-0.8
2,639,846	-		CCNA_02492	0.26	-0.1
2,639,853	-		CCNA_02492	0.27	-0.8
2,639,857	+		CCNA_02492	0.28	-0.4
2,639,857	+		CCNA_02492	0.28	-0.8
2,639,857	+		CCNA_02492	0.28	-1.5
2,639,857	+		CCNA_02492	0.28	-0.1
2,639,857	+		CCNA_02492	0.28	+0.3
2,639,857	+		CCNA_02492	0.28	-1.2
2,639,857	+		CCNA_02492	0.28	-0.8
2,639,865	-		CCNA_02492	0.29	-1.6
2,639,865	-		CCNA_02492	0.29	-1.5
2,639,888	-		CCNA_02492	0.33	-0.8
2,639,888	-		CCNA_02492	0.33	+0.5
2,639,920	+		CCNA_02492	0.38	-1.5
2,639,928	-		CCNA_02492	0.39	-1.6
2,639,930	-		CCNA_02492	0.39	-0.5
2,639,940	+		CCNA_02492	0.41	+1.0
2,640,002	+		CCNA_02492	0.50	+0.6
2,640,010	-		CCNA_02492	0.52	+0.3
2,640,010	-		CCNA_02492	0.52	-1.6
2,640,010	-		CCNA_02492	0.52	-1.5
2,640,010	-		CCNA_02492	0.52	-1.6
2,640,010	-		CCNA_02492	0.52	-1.4
2,640,025	+		CCNA_02492	0.54	-1.2
2,640,025	+		CCNA_02492	0.54	-1.0
2,640,165	+		CCNA_02492	0.75	-0.1
2,640,173	-		CCNA_02492	0.77	-1.5
2,640,224	-		CCNA_02492	0.84	+0.3
2,640,233	+		CCNA_02492	0.86	-0.8
2,640,241	-		CCNA_02492	0.87	-1.6
2,640,241	-		CCNA_02492	0.87	+0.2
2,640,267	-				+0.8
2,640,273	-				-0.4
2,640,318	+				+0.0
2,640,349	-				-1.1
2,640,349	-				+1.2
2,640,349	-				-0.1
2,640,349	-				-0.1
2,640,349	-				-0.3
2,640,349	-				-1.3
2,640,349	-				-0.7
2,640,404	+				-1.7
2,640,410	+				-0.1
2,640,410	+				-0.8
2,640,425	+				+1.2
2,640,425	+				-0.5
2,640,425	+				-2.0
2,640,425	+				-0.2
2,640,433	-				-0.5
2,640,433	-				-0.9
2,640,433	-				-0.2
2,640,451	-				+0.7
2,640,491	+		CCNA_02493	0.13	-1.4
2,640,521	-		CCNA_02493	0.15	-0.9
2,640,530	+		CCNA_02493	0.16	+0.7
2,640,538	-		CCNA_02493	0.17	-0.2
2,640,559	+		CCNA_02493	0.19	+1.5
2,640,562	-		CCNA_02493	0.19	-1.3
2,640,632	+		CCNA_02493	0.25	+0.3
2,640,632	+		CCNA_02493	0.25	-2.0
2,640,651	+		CCNA_02493	0.27	-0.3
2,640,651	+		CCNA_02493	0.27	-2.2
2,640,651	+		CCNA_02493	0.27	+0.4
2,640,659	-		CCNA_02493	0.27	-1.0
2,640,680	-		CCNA_02493	0.29	+0.8
2,640,686	+		CCNA_02493	0.30	-0.5
2,640,693	-		CCNA_02493	0.30	+2.0
2,640,704	-		CCNA_02493	0.31	-0.9
2,640,720	-		CCNA_02493	0.33	-1.1
2,640,771	+		CCNA_02493	0.37	+0.2
2,640,775	-		CCNA_02493	0.38	-1.9
2,640,779	-		CCNA_02493	0.38	+0.7
2,640,779	-		CCNA_02493	0.38	-1.2
2,640,781	+		CCNA_02493	0.38	+0.5
2,640,781	-		CCNA_02493	0.38	-0.9
2,640,803	+		CCNA_02493	0.40	+1.1
2,640,811	-		CCNA_02493	0.41	-0.9
2,640,816	+		CCNA_02493	0.41	-1.4
2,640,816	-		CCNA_02493	0.41	-1.2
2,640,860	+		CCNA_02493	0.45	-1.7
2,640,873	-		CCNA_02493	0.46	-1.8
2,640,891	-		CCNA_02493	0.48	-1.7
2,640,945	-		CCNA_02493	0.52	-1.1
2,640,986	-		CCNA_02493	0.56	-0.6
2,641,025	+		CCNA_02493	0.59	+1.5
2,641,025	+		CCNA_02493	0.59	+1.7
2,641,026	+		CCNA_02493	0.59	-0.7
2,641,033	-		CCNA_02493	0.60	+0.7
2,641,033	-		CCNA_02493	0.60	-1.2
2,641,041	+		CCNA_02493	0.61	+0.9
2,641,041	+		CCNA_02493	0.61	-1.2
2,641,057	+		CCNA_02493	0.62	-1.1
2,641,117	+		CCNA_02493	0.67	-1.9
2,641,125	-		CCNA_02493	0.68	-0.3
2,641,139	+		CCNA_02493	0.69	+0.3
2,641,147	-		CCNA_02493	0.70	+0.4
2,641,257	+		CCNA_02493	0.79	+0.2
2,641,265	-		CCNA_02493	0.80	+2.1
2,641,297	+		CCNA_02493	0.83	-1.2
2,641,302	+		CCNA_02493	0.83	+1.5
2,641,302	+		CCNA_02493	0.83	-0.1
2,641,302	+		CCNA_02493	0.83	-1.5
2,641,315	-		CCNA_02493	0.85	+0.7