Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02225

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
2,372,690	+				-0.2
2,372,735	-				-0.4
2,372,750	+				-1.5
2,372,750	+				-0.3
2,372,771	-				-0.1
2,372,780	+				-0.9
2,372,781	+				-0.6
2,372,786	+				-1.3
2,372,794	-				+1.2
2,372,820	+				-2.0
2,372,827	-				+0.2
2,372,833	+				-2.3
2,372,853	-		CCNA_02224	0.12	+0.4
2,372,991	+		CCNA_02224	0.27	-0.0
2,373,024	-		CCNA_02224	0.30	+1.0
2,373,097	+		CCNA_02224	0.38	-1.2
2,373,196	+		CCNA_02224	0.48	+0.4
2,373,199	-		CCNA_02224	0.49	-0.1
2,373,199	-		CCNA_02224	0.49	+0.4
2,373,202	+		CCNA_02224	0.49	-0.0
2,373,202	+		CCNA_02224	0.49	-1.2
2,373,210	-		CCNA_02224	0.50	-0.0
2,373,214	+		CCNA_02224	0.50	-2.2
2,373,224	+		CCNA_02224	0.51	-0.5
2,373,241	+		CCNA_02224	0.53	-3.7
2,373,241	+		CCNA_02224	0.53	-2.2
2,373,249	-		CCNA_02224	0.54	-1.4
2,373,249	-		CCNA_02224	0.54	-0.0
2,373,254	-		CCNA_02224	0.54	+0.4
2,373,272	-		CCNA_02224	0.56	-0.3
2,373,273	-		CCNA_02224	0.57	+1.4
2,373,284	+		CCNA_02224	0.58	-1.5
2,373,414	+		CCNA_02224	0.71	+0.3
2,373,414	+		CCNA_02224	0.71	-1.4
2,373,422	-		CCNA_02224	0.72	-0.2
2,373,422	-		CCNA_02224	0.72	-1.7
2,373,439	-		CCNA_02224	0.74	+0.2
2,373,450	-		CCNA_02224	0.75	+0.1
2,373,500	+		CCNA_02224	0.81	+0.5
2,373,500	+		CCNA_02224	0.81	-0.7
2,373,508	-		CCNA_02224	0.81	-0.4
2,373,508	-		CCNA_02224	0.81	+1.0
2,373,508	-		CCNA_02224	0.81	-1.6
2,373,508	-		CCNA_02224	0.81	+0.8
2,373,510	-		CCNA_02224	0.82	-0.6
2,373,539	+		CCNA_02224	0.85	-1.4
2,373,543	+		CCNA_02224	0.85	-1.2
2,373,575	-		CCNA_02224	0.88	-2.7
2,373,583	+		CCNA_02224	0.89	-0.4
2,373,583	+		CCNA_02224	0.89	-0.6
2,373,583	+		CCNA_02224	0.89	-1.3
2,373,591	-				-0.8
2,373,667	-				-2.1
2,373,671	+				-0.7
2,373,692	+				-0.9
2,373,694	+				-2.7
2,373,700	-				-0.2
2,373,700	-				+0.9
2,373,734	-				+3.1
2,373,734	-				+2.6
2,373,787	+		CCNA_02225	0.11	+1.9
2,373,818	+		CCNA_02225	0.14	+0.4
2,373,856	-		CCNA_02225	0.18	+3.5
2,373,944	-		CCNA_02225	0.27	+2.1
2,373,971	+		CCNA_02225	0.30	+0.0
2,373,995	-		CCNA_02225	0.32	+3.1
2,374,100	-		CCNA_02225	0.43	+2.5
2,374,122	-		CCNA_02225	0.45	+3.0
2,374,249	+		CCNA_02225	0.58	-0.4
2,374,257	-		CCNA_02225	0.59	+2.7
2,374,299	+		CCNA_02225	0.63	+1.6
2,374,307	-		CCNA_02225	0.64	+3.0
2,374,317	+		CCNA_02225	0.65	-0.5
2,374,324	-		CCNA_02225	0.66	+3.2
2,374,353	+		CCNA_02225	0.69	+0.6
2,374,458	-		CCNA_02225	0.80	+2.3
2,374,458	-		CCNA_02225	0.80	+2.9
2,374,458	-		CCNA_02225	0.80	+3.5
2,374,458	-		CCNA_02225	0.80	+3.3
2,374,499	-		CCNA_02225	0.84	+3.3
2,374,539	-		CCNA_02225	0.88	+2.9
2,374,558	-		CCNA_02225	0.90	+2.6
2,374,738	-				-2.1
2,374,741	+		CCNA_02226	0.11	+0.0
2,374,768	-		CCNA_02226	0.18	-1.4
2,374,768	-		CCNA_02226	0.18	-0.3
2,374,818	-		CCNA_02226	0.31	+1.6
2,374,831	+		CCNA_02226	0.34	+0.4
2,374,831	+		CCNA_02226	0.34	-0.3
2,374,839	-		CCNA_02226	0.37	+0.6
2,374,839	-		CCNA_02226	0.37	+2.6
2,374,844	-		CCNA_02226	0.38	-0.7
2,374,862	-		CCNA_02226	0.43	-0.9
2,374,902	+		CCNA_02226	0.53	+0.4
2,374,902	+		CCNA_02226	0.53	-0.9
2,374,910	-		CCNA_02226	0.55	-1.0
2,374,942	-		CCNA_02226	0.64	-0.5
2,374,945	+		CCNA_02226	0.65	-1.5
2,374,948	-		CCNA_02226	0.65	-1.5
2,374,977	+		CCNA_02226	0.73	-1.7
2,375,000	-		CCNA_02226	0.79	-1.4
2,375,003	+		CCNA_02226	0.80	-0.7
2,375,013	+		CCNA_02226	0.83	-0.5
2,375,021	-		CCNA_02226	0.85	-0.9
2,375,023	+		CCNA_02226	0.85	-1.5
2,375,023	+		CCNA_02226	0.85	-1.9
2,375,031	-		CCNA_02226	0.87	+1.2
2,375,031	-		CCNA_02226	0.87	-0.8
2,375,031	-		CCNA_02226	0.87	+0.2
2,375,031	-		CCNA_02226	0.87	-0.9
2,375,043	+				+0.2
2,375,043	+				+0.1
2,375,051	-				+0.9
2,375,061	+				-0.7
2,375,068	+				+1.7
2,375,069	-				-2.2
2,375,076	-				+0.1
2,375,076	-				+0.0
2,375,095	-				-1.1
2,375,095	-				-0.0
2,375,095	-				-0.7
2,375,101	+				-1.1
2,375,149	-				+1.5
2,375,194	-				-0.5
2,375,225	+		CCNA_02227	0.13	-2.7
2,375,256	-		CCNA_02227	0.17	+0.3
2,375,307	+		CCNA_02227	0.23	-0.4
2,375,315	-		CCNA_02227	0.23	+0.1
2,375,329	-		CCNA_02227	0.25	+0.4
2,375,380	+		CCNA_02227	0.31	+0.4
2,375,407	-		CCNA_02227	0.34	+0.3
2,375,430	+		CCNA_02227	0.37	-2.4
2,375,438	-		CCNA_02227	0.38	+0.0
2,375,444	+		CCNA_02227	0.38	-0.6
2,375,444	+		CCNA_02227	0.38	-1.0
2,375,452	-		CCNA_02227	0.39	+0.3
2,375,468	+		CCNA_02227	0.41	+1.3
2,375,475	-		CCNA_02227	0.42	+0.6
2,375,496	-		CCNA_02227	0.44	+0.9
2,375,497	-		CCNA_02227	0.44	+1.0
2,375,518	+		CCNA_02227	0.47	+0.6
2,375,526	-		CCNA_02227	0.48	+0.6
2,375,527	-		CCNA_02227	0.48	-0.2
2,375,537	-		CCNA_02227	0.49	-2.1
2,375,537	-		CCNA_02227	0.49	-0.3
2,375,612	+		CCNA_02227	0.58	-0.8
2,375,612	+		CCNA_02227	0.58	-2.0