Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02076
Experiment: PYE with Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with Paraquat dichloride 0.015 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,226,433 | - | CCNA_02075 | 0.75 | +1.2 | |
2,226,865 | + | +3.1 | |||
2,226,875 | + | +0.1 | |||
2,226,919 | - | +0.9 | |||
2,226,920 | - | +1.5 | |||
2,226,943 | + | +0.6 | |||
2,227,602 | + | -0.4 | |||
2,227,610 | - | +2.0 | |||
2,227,610 | - | +1.5 | |||
2,227,687 | - | +2.2 | |||
2,227,697 | + | +1.2 | |||
2,227,845 | + | CCNA_02077 | 0.26 | -0.3 | |
2,227,870 | + | CCNA_02077 | 0.29 | -1.5 | |
2,227,955 | + | CCNA_02077 | 0.40 | -0.2 | |
2,228,007 | - | CCNA_02077 | 0.46 | +1.9 | |
2,228,007 | - | CCNA_02077 | 0.46 | +2.0 | |
2,228,131 | - | CCNA_02077 | 0.62 | +2.3 | |
2,228,221 | + | CCNA_02077 | 0.73 | -0.2 | |
2,228,221 | + | CCNA_02077 | 0.73 | -0.2 | |
2,228,285 | + | CCNA_02077 | 0.82 | -1.8 | |
2,228,293 | - | CCNA_02077 | 0.83 | +1.0 | |
2,228,374 | - | +1.8 | |||
2,228,386 | - | +1.7 |
Or see this region's nucleotide sequence