Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02035

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
2,178,004	-				-1.7
2,178,032	-				-0.3
2,178,110	-		CCNA_02034	0.16	+0.1
2,178,207	+		CCNA_02034	0.26	+0.3
2,178,230	+		CCNA_02034	0.28	-0.9
2,178,235	+		CCNA_02034	0.28	-0.4
2,178,238	-		CCNA_02034	0.29	+0.1
2,178,248	-		CCNA_02034	0.30	-1.0
2,178,250	+		CCNA_02034	0.30	+1.4
2,178,250	+		CCNA_02034	0.30	-0.8
2,178,258	-		CCNA_02034	0.31	+0.5
2,178,273	+		CCNA_02034	0.32	-2.1
2,178,273	+		CCNA_02034	0.32	+1.4
2,178,273	+		CCNA_02034	0.32	-1.5
2,178,273	+		CCNA_02034	0.32	-0.2
2,178,276	-		CCNA_02034	0.32	-0.2
2,178,282	+		CCNA_02034	0.33	+0.4
2,178,283	+		CCNA_02034	0.33	+1.4
2,178,287	+		CCNA_02034	0.33	+0.2
2,178,292	+		CCNA_02034	0.34	+1.7
2,178,293	+		CCNA_02034	0.34	+2.1
2,178,293	+		CCNA_02034	0.34	-0.1
2,178,293	+		CCNA_02034	0.34	+1.3
2,178,293	+		CCNA_02034	0.34	+2.0
2,178,293	+		CCNA_02034	0.34	-1.4
2,178,301	-		CCNA_02034	0.35	-2.3
2,178,348	+		CCNA_02034	0.39	-0.1
2,178,348	+		CCNA_02034	0.39	+0.4
2,178,369	-		CCNA_02034	0.42	+1.7
2,178,399	+		CCNA_02034	0.44	+1.2
2,178,414	+		CCNA_02034	0.46	-0.2
2,178,417	-		CCNA_02034	0.46	-1.8
2,178,417	-		CCNA_02034	0.46	-0.8
2,178,449	+				+2.4
2,178,449	+		CCNA_02034	0.49	+0.4
2,178,457	-		CCNA_02034	0.50	-1.1
2,178,457	-		CCNA_02034	0.50	+1.8
2,178,480	+		CCNA_02034	0.52	+1.4
2,178,484	+		CCNA_02034	0.53	+0.3
2,178,528	-		CCNA_02034	0.57	-0.9
2,178,541	-		CCNA_02034	0.58	-0.6
2,178,567	+		CCNA_02034	0.61	-0.0
2,178,700	+		CCNA_02034	0.74	+1.7
2,178,700	+		CCNA_02034	0.74	+0.1
2,178,700	+		CCNA_02034	0.74	+1.6
2,178,708	-		CCNA_02034	0.75	+0.4
2,178,753	+		CCNA_02034	0.79	-1.1
2,178,793	+		CCNA_02034	0.83	+0.4
2,178,801	-		CCNA_02034	0.84	-2.2
2,178,803	+		CCNA_02034	0.84	+0.1
2,178,803	+		CCNA_02034	0.84	+1.4
2,178,805	+		CCNA_02034	0.85	-0.4
2,178,811	-		CCNA_02034	0.85	-0.6
2,178,834	-		CCNA_02034	0.87	+1.4
2,178,835	+		CCNA_02034	0.87	+0.9
2,178,938	-				+1.4
2,178,956	+				+1.0
2,178,964	-				-0.6
2,178,966	-				+0.2
2,178,985	+				-0.2
2,178,993	-				-0.2
2,179,057	+				+0.1
2,179,065	-				-0.4
2,179,080	-		CCNA_02035	0.10	-1.0
2,179,085	-		CCNA_02035	0.11	-0.6
2,179,087	+		CCNA_02035	0.11	-1.6
2,179,090	-		CCNA_02035	0.11	+1.7
2,179,106	+		CCNA_02035	0.12	+0.2
2,179,114	-		CCNA_02035	0.13	-1.1
2,179,148	+		CCNA_02035	0.16	-0.8
2,179,156	-		CCNA_02035	0.16	+1.0
2,179,168	+		CCNA_02035	0.17	-1.0
2,179,234	+		CCNA_02035	0.23	-1.0
2,179,234	+		CCNA_02035	0.23	+0.6
2,179,251	+		CCNA_02035	0.24	-2.1
2,179,327	-		CCNA_02035	0.31	-0.4
2,179,380	+		CCNA_02035	0.35	-1.3
2,179,536	-		CCNA_02035	0.48	-0.0
2,179,547	+		CCNA_02035	0.49	-0.3
2,179,547	+		CCNA_02035	0.49	+0.2
2,179,555	-		CCNA_02035	0.49	-0.8
2,179,555	-		CCNA_02035	0.49	-1.2
2,179,607	-		CCNA_02035	0.54	+2.2
2,179,703	-		CCNA_02035	0.62	-0.6
2,179,794	-		CCNA_02035	0.69	+2.9
2,179,813	-		CCNA_02035	0.71	+0.0
2,179,862	+		CCNA_02035	0.75	-0.5
2,179,870	-		CCNA_02035	0.75	-0.6
2,179,896	-		CCNA_02035	0.78	-0.7
2,179,906	+		CCNA_02035	0.78	-2.3
2,179,924	+		CCNA_02035	0.80	+2.2
2,179,925	+		CCNA_02035	0.80	+0.4
2,179,927	-		CCNA_02035	0.80	+0.1
2,179,989	+		CCNA_02035	0.85	-0.4
2,180,007	-		CCNA_02035	0.87	+1.1
2,180,007	-		CCNA_02035	0.87	-0.8
2,180,007	-		CCNA_02035	0.87	+0.0
2,180,007	-		CCNA_02035	0.87	-0.3
2,180,007	-		CCNA_02035	0.87	+1.0
2,180,141	-				-2.1
2,180,141	-				+0.1
2,180,265	-				-0.8
2,180,271	+				+0.9
2,180,296	+				-1.1
2,180,392	-				-0.2
2,180,394	+				+0.6
2,180,394	+				-1.5
2,180,394	+				-1.2
2,180,402	-				-1.5
2,180,470	+				-1.0
2,180,471	-				+2.3
2,180,471	-				+1.0
2,180,501	-		CCNA_R0047	0.43	+1.2
2,180,515	-		CCNA_R0047	0.61	-0.3
2,180,521	+		CCNA_R0047	0.69	-0.3
2,180,521	+		CCNA_R0047	0.69	-0.2
2,180,521	+		CCNA_R0047	0.69	-0.9
2,180,521	+		CCNA_R0047	0.69	-2.1
2,180,540	+				+0.5
2,180,542	+				-0.0
2,180,668	+				+1.1
2,180,668	+				-0.3
2,180,668	+				-1.8
2,180,676	-				+1.5
2,180,699	+		CCNA_02036	0.18	-2.9
2,180,723	+		CCNA_02036	0.26	+2.8
2,180,764	+		CCNA_02036	0.41	-0.1
2,180,771	+		CCNA_02036	0.43	-0.3
2,180,814	+		CCNA_02036	0.59	-1.5
2,180,832	-		CCNA_02036	0.65	+1.1
2,180,832	-		CCNA_02036	0.65	+1.6
2,180,858	+		CCNA_02036	0.75	-1.5
2,180,864	+		CCNA_02036	0.77	-0.2
2,180,866	-		CCNA_02036	0.77	+1.4
2,180,866	-		CCNA_02036	0.77	+1.1
2,180,943	-				+1.0
2,180,987	+				-1.9
2,180,987	+				+1.3
2,180,987	+				-0.2
2,180,995	-				+0.8
2,181,113	+				-2.3
2,181,139	+				+1.9
2,181,147	-				+1.8