Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01644

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
1,763,714	+				+0.3
1,763,722	-				+1.4
1,763,792	-				+1.7
1,763,792	-				+1.3
1,763,912	-		CCNA_01643	0.23	+2.4
1,763,924	+		CCNA_01643	0.25	-0.5
1,763,924	+		CCNA_01643	0.25	+1.0
1,763,924	+		CCNA_01643	0.25	+0.1
1,763,927	-		CCNA_01643	0.25	+1.9
1,763,931	-		CCNA_01643	0.26	+1.5
1,763,932	-		CCNA_01643	0.26	+2.2
1,763,944	-		CCNA_01643	0.27	+2.0
1,763,965	-		CCNA_01643	0.30	+1.5
1,764,031	-		CCNA_01643	0.38	+1.5
1,764,064	+		CCNA_01643	0.41	+1.1
1,764,072	-		CCNA_01643	0.42	+1.5
1,764,117	+		CCNA_01643	0.48	+1.5
1,764,130	-		CCNA_01643	0.49	+1.6
1,764,167	-		CCNA_01643	0.54	+1.6
1,764,183	-		CCNA_01643	0.56	+1.7
1,764,221	+		CCNA_01643	0.60	-2.6
1,764,229	-		CCNA_01643	0.61	+1.7
1,764,230	-		CCNA_01643	0.61	+2.2
1,764,248	+		CCNA_01643	0.63	+1.0
1,764,313	+		CCNA_01643	0.71	+0.4
1,764,313	+		CCNA_01643	0.71	+1.1
1,764,321	-		CCNA_01643	0.72	+1.4
1,764,375	-		CCNA_01643	0.78	+0.9
1,764,380	+		CCNA_01643	0.79	-0.0
1,764,396	+		CCNA_01643	0.81	+1.0
1,764,411	+		CCNA_01643	0.83	+0.7
1,764,419	-		CCNA_01643	0.84	+2.6
1,764,419	-		CCNA_01643	0.84	+1.0
1,764,421	+		CCNA_01643	0.84	+1.2
1,764,450	+		CCNA_01643	0.87	-1.4
1,764,464	+		CCNA_01643	0.89	+2.0
1,764,500	+				+0.2
1,764,500	+				+0.4
1,764,555	+				+0.3
1,764,555	+				+0.7
1,764,555	+				+0.1
1,764,560	+				+0.3
1,764,563	-				+0.6
1,764,563	-				-1.7
1,764,563	-				+0.5
1,764,588	-				+0.2
1,764,629	+				+0.4
1,764,663	-				+0.5
1,764,671	-				+0.3
1,764,673	+				-1.2
1,764,738	+				-0.7
1,764,748	+		CCNA_01644	0.10	-1.2
1,764,753	+		CCNA_01644	0.11	-0.7
1,764,756	-		CCNA_01644	0.11	-0.1
1,764,761	-		CCNA_01644	0.12	+1.0
1,764,761	-		CCNA_01644	0.12	+1.2
1,764,796	+		CCNA_01644	0.16	+0.1
1,764,885	+		CCNA_01644	0.26	-1.7
1,764,922	-		CCNA_01644	0.30	+0.6
1,764,922	-		CCNA_01644	0.30	+0.8
1,764,933	+		CCNA_01644	0.31	+1.0
1,764,950	+		CCNA_01644	0.33	+0.8
1,764,978	-		CCNA_01644	0.36	+1.9
1,765,010	+		CCNA_01644	0.39	-0.2
1,765,012	+		CCNA_01644	0.40	+0.1
1,765,036	+		CCNA_01644	0.42	+0.6
1,765,064	-		CCNA_01644	0.45	+1.1
1,765,064	-		CCNA_01644	0.45	+2.0
1,765,084	+		CCNA_01644	0.48	-1.3
1,765,092	-		CCNA_01644	0.49	+2.7
1,765,094	+		CCNA_01644	0.49	-0.9
1,765,094	+				+2.0
1,765,102	-		CCNA_01644	0.50	+1.0
1,765,102	-		CCNA_01644	0.50	+1.3
1,765,102	-		CCNA_01644	0.50	+1.7
1,765,120	+		CCNA_01644	0.52	+1.6
1,765,123	-		CCNA_01644	0.52	+2.6
1,765,129	+		CCNA_01644	0.53	-0.6
1,765,138	-		CCNA_01644	0.54	+2.1
1,765,147	-		CCNA_01644	0.55	+0.5
1,765,171	+		CCNA_01644	0.57	-0.7
1,765,211	+		CCNA_01644	0.62	-1.6
1,765,219	-		CCNA_01644	0.63	+1.6
1,765,219	-		CCNA_01644	0.63	+1.2
1,765,224	-		CCNA_01644	0.63	+1.5
1,765,231	+		CCNA_01644	0.64	-0.1
1,765,238	+		CCNA_01644	0.65	+0.4
1,765,240	-		CCNA_01644	0.65	+0.8
1,765,349	+		CCNA_01644	0.77	+0.8
1,765,374	+		CCNA_01644	0.80	-0.7
1,765,382	-		CCNA_01644	0.81	-0.3
1,765,390	+		CCNA_01644	0.82	-0.8
1,765,395	+		CCNA_01644	0.82	+2.3
1,765,462	-		CCNA_01644	0.90	+1.7
1,765,514	-				+0.6
1,765,546	+				+2.6
1,765,566	+				-1.4
1,765,589	+				-1.6
1,765,597	-				+0.3
1,765,638	+				+1.3
1,765,701	+				+0.9
1,765,720	+				+0.3
1,765,720	+				-0.0
1,765,720	+				+0.7
1,765,728	-				-0.9
1,765,733	+				-0.6
1,765,761	+		CCNA_01645	0.11	+0.9
1,765,772	+		CCNA_01645	0.12	-0.9
1,765,819	+		CCNA_01645	0.18	-0.2
1,766,002	-		CCNA_01645	0.39	-0.2
1,766,015	+		CCNA_01645	0.40	+0.3
1,766,040	-		CCNA_01645	0.43	-1.4
1,766,119	+		CCNA_01645	0.52	+0.6
1,766,119	+		CCNA_01645	0.52	+0.1
1,766,119	+		CCNA_01645	0.52	+2.6
1,766,119	+		CCNA_01645	0.52	+1.5
1,766,119	+		CCNA_01645	0.52	-0.8
1,766,119	+		CCNA_01645	0.52	+0.2
1,766,119	+		CCNA_01645	0.52	+0.6
1,766,119	+		CCNA_01645	0.52	-1.0
1,766,127	-		CCNA_01645	0.53	-0.3
1,766,127	-		CCNA_01645	0.53	-0.2
1,766,127	-		CCNA_01645	0.53	-0.2
1,766,127	-		CCNA_01645	0.53	-0.2
1,766,201	+		CCNA_01645	0.62	-1.0
1,766,209	-		CCNA_01645	0.63	-0.2
1,766,209	-		CCNA_01645	0.63	+0.4
1,766,224	+		CCNA_01645	0.65	-0.9
1,766,245	+		CCNA_01645	0.67	-0.8
1,766,253	-		CCNA_01645	0.68	+0.0
1,766,288	+		CCNA_01645	0.72	-0.1
1,766,296	-		CCNA_01645	0.73	-0.3
1,766,311	-		CCNA_01645	0.75	-0.8
1,766,327	+		CCNA_01645	0.77	-0.2
1,766,375	+		CCNA_01645	0.82	+0.3
1,766,376	-		CCNA_01645	0.82	-0.7
1,766,387	+		CCNA_01645	0.84	-0.4
1,766,387	+		CCNA_01645	0.84	-0.5
1,766,387	+		CCNA_01645	0.84	+1.3
1,766,388	+		CCNA_01645	0.84	+0.0
1,766,395	-		CCNA_01645	0.85	-0.9
1,766,432	+		CCNA_01645	0.89	-0.1
1,766,440	-		CCNA_01645	0.90	-1.6
1,766,446	+				+0.9
1,766,446	+				-0.4
1,766,446	+				+0.7
1,766,446	+				+0.3
1,766,446	+				-0.2
1,766,446	+				+1.8
1,766,446	+				+1.0
1,766,446	+				+1.2
1,766,446	+				-0.2
1,766,446	+				+1.1
1,766,454	-				+0.6
1,766,454	-				+0.1
1,766,454	-				-0.1
1,766,454	-				+1.3
1,766,454	-				+2.6
1,766,454	-				-1.5
1,766,454	-				+2.3
1,766,454	-				-0.2
1,766,454	-				+0.5
1,766,454	-				+0.9
1,766,454	-				-0.1
1,766,454	-				-0.6
1,766,458	+				-0.2
1,766,464	+				+1.0
1,766,467	-				+0.4
1,766,472	-				+0.8
1,766,490	+				-0.9
1,766,490	+				+0.1
1,766,490	+				+2.1
1,766,498	-				+1.3
1,766,498	-				+1.3
1,766,504	-				-0.8
1,766,528	+				+0.3
1,766,536	-				+0.3
1,766,536	-				-0.2
1,766,536	-				-0.7