Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2696 and Ac3H11_2697 are separated by 27 nucleotides Ac3H11_2697 and Ac3H11_2698 overlap by 4 nucleotides Ac3H11_2698 and Ac3H11_2699 are separated by 105 nucleotides
Ac3H11_2696 - hypothetical protein, at 991,945 to 993,243
_2696
Ac3H11_2697 - hypothetical protein, at 993,271 to 993,387
_2697
Ac3H11_2698 - hypothetical protein, at 993,384 to 994,802
_2698
Ac3H11_2699 - Transcriptional regulator, MarR family, at 994,908 to 996,443
_2699
Position (kb) 993
994
995 Strain fitness (log2 ratio) -1
0
1
2 at 992.537 kb on + strand, within Ac3H11_2696 at 992.538 kb on - strand, within Ac3H11_2696 at 992.786 kb on + strand, within Ac3H11_2696 at 992.786 kb on + strand, within Ac3H11_2696 at 992.787 kb on - strand, within Ac3H11_2696 at 992.787 kb on - strand, within Ac3H11_2696 at 992.918 kb on + strand, within Ac3H11_2696 at 992.918 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.368 kb on - strand, within Ac3H11_2697 at 993.385 kb on + strand at 993.386 kb on - strand at 993.473 kb on + strand at 993.504 kb on + strand at 993.504 kb on + strand at 993.504 kb on + strand at 993.504 kb on + strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.660 kb on + strand, within Ac3H11_2698 at 993.730 kb on - strand, within Ac3H11_2698 at 994.027 kb on + strand, within Ac3H11_2698 at 994.027 kb on + strand, within Ac3H11_2698 at 994.027 kb on + strand, within Ac3H11_2698 at 994.028 kb on - strand, within Ac3H11_2698 at 994.087 kb on + strand, within Ac3H11_2698 at 994.087 kb on + strand, within Ac3H11_2698 at 994.087 kb on + strand, within Ac3H11_2698 at 994.366 kb on + strand, within Ac3H11_2698 at 994.366 kb on + strand, within Ac3H11_2698 at 994.366 kb on + strand, within Ac3H11_2698 at 994.367 kb on - strand, within Ac3H11_2698 at 994.367 kb on - strand, within Ac3H11_2698 at 994.367 kb on - strand, within Ac3H11_2698 at 994.367 kb on - strand, within Ac3H11_2698 at 994.424 kb on - strand, within Ac3H11_2698 at 994.444 kb on + strand, within Ac3H11_2698 at 994.445 kb on - strand, within Ac3H11_2698 at 994.445 kb on - strand, within Ac3H11_2698 at 994.602 kb on - strand, within Ac3H11_2698 at 994.853 kb on + strand at 994.853 kb on + strand at 994.853 kb on + strand at 994.854 kb on - strand at 994.854 kb on - strand at 994.872 kb on + strand at 994.872 kb on + strand at 994.950 kb on + strand at 994.951 kb on - strand at 994.951 kb on - strand at 995.208 kb on + strand, within Ac3H11_2699 at 995.315 kb on + strand, within Ac3H11_2699 at 995.332 kb on + strand, within Ac3H11_2699 at 995.353 kb on + strand, within Ac3H11_2699 at 995.440 kb on + strand, within Ac3H11_2699 at 995.441 kb on - strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.485 kb on - strand, within Ac3H11_2699 at 995.485 kb on - strand, within Ac3H11_2699
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.004 mg/ml remove 992,537 + Ac3H11_2696 0.46 -0.1 992,538 - Ac3H11_2696 0.46 +0.0 992,786 + Ac3H11_2696 0.65 +1.1 992,786 + Ac3H11_2696 0.65 -0.5 992,787 - Ac3H11_2696 0.65 +0.6 992,787 - Ac3H11_2696 0.65 +0.5 992,918 + Ac3H11_2696 0.75 +0.1 992,918 + Ac3H11_2696 0.75 -0.4 993,086 + Ac3H11_2696 0.88 +0.8 993,086 + Ac3H11_2696 0.88 +0.7 993,086 + Ac3H11_2696 0.88 +0.3 993,086 + Ac3H11_2696 0.88 -0.2 993,087 - Ac3H11_2696 0.88 -1.6 993,087 - Ac3H11_2696 0.88 +0.3 993,087 - Ac3H11_2696 0.88 -0.8 993,087 - Ac3H11_2696 0.88 -0.2 993,087 - Ac3H11_2696 0.88 +0.5 993,368 - Ac3H11_2697 0.83 +0.7 993,385 + -0.2 993,386 - +0.2 993,473 + -1.5 993,504 + -0.9 993,504 + +0.0 993,504 + +0.5 993,504 + +0.8 993,505 - -0.7 993,505 - +0.4 993,505 - +2.2 993,505 - -0.1 993,505 - +0.2 993,505 - -0.2 993,660 + Ac3H11_2698 0.19 +0.3 993,730 - Ac3H11_2698 0.24 -0.8 994,027 + Ac3H11_2698 0.45 -0.2 994,027 + Ac3H11_2698 0.45 +0.3 994,027 + Ac3H11_2698 0.45 +0.2 994,028 - Ac3H11_2698 0.45 +1.3 994,087 + Ac3H11_2698 0.50 +0.0 994,087 + Ac3H11_2698 0.50 -0.2 994,087 + Ac3H11_2698 0.50 -0.8 994,366 + Ac3H11_2698 0.69 +0.8 994,366 + Ac3H11_2698 0.69 +0.3 994,366 + Ac3H11_2698 0.69 +0.2 994,367 - Ac3H11_2698 0.69 +0.2 994,367 - Ac3H11_2698 0.69 -0.4 994,367 - Ac3H11_2698 0.69 +0.4 994,367 - Ac3H11_2698 0.69 -0.0 994,424 - Ac3H11_2698 0.73 +0.1 994,444 + Ac3H11_2698 0.75 +0.7 994,445 - Ac3H11_2698 0.75 +0.8 994,445 - Ac3H11_2698 0.75 +0.4 994,602 - Ac3H11_2698 0.86 -1.1 994,853 + -0.1 994,853 + +0.0 994,853 + -1.1 994,854 - -0.1 994,854 - +0.2 994,872 + -0.6 994,872 + -0.7 994,950 + -0.9 994,951 - -1.1 994,951 - -0.1 995,208 + Ac3H11_2699 0.20 +0.7 995,315 + Ac3H11_2699 0.26 +0.4 995,332 + Ac3H11_2699 0.28 +0.2 995,353 + Ac3H11_2699 0.29 +0.4 995,440 + Ac3H11_2699 0.35 +0.2 995,441 - Ac3H11_2699 0.35 +0.6 995,484 + Ac3H11_2699 0.38 -1.3 995,484 + Ac3H11_2699 0.38 +0.8 995,484 + Ac3H11_2699 0.38 +0.4 995,484 + Ac3H11_2699 0.38 -0.1 995,484 + Ac3H11_2699 0.38 -0.9 995,485 - Ac3H11_2699 0.38 -1.1 995,485 - Ac3H11_2699 0.38 +0.9
Or see this region's nucleotide sequence