Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2363 and Ac3H11_2364 are separated by 329 nucleotides
Ac3H11_2363 - hypothetical protein, at 621,225 to 621,614
_2363
Ac3H11_2364 - Ferrichrome-iron receptor, at 621,944 to 624,139
_2364
Position (kb) 621
622 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 620.225 kb on - strand at 620.225 kb on - strand at 620.227 kb on + strand at 620.227 kb on + strand at 620.227 kb on + strand at 620.227 kb on + strand at 620.228 kb on - strand at 620.228 kb on - strand at 620.228 kb on - strand at 620.228 kb on - strand at 620.231 kb on + strand at 620.232 kb on - strand at 620.232 kb on - strand at 620.266 kb on + strand at 620.266 kb on + strand at 620.266 kb on + strand at 620.267 kb on - strand at 620.267 kb on - strand at 620.267 kb on - strand at 620.267 kb on - strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.274 kb on + strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.275 kb on - strand at 620.277 kb on + strand at 620.277 kb on + strand at 620.277 kb on + strand at 620.278 kb on - strand at 620.278 kb on - strand at 620.278 kb on - strand at 620.278 kb on - strand at 620.278 kb on - strand at 620.295 kb on + strand at 620.295 kb on + strand at 620.295 kb on + strand at 620.295 kb on + strand at 620.295 kb on + strand at 620.296 kb on - strand at 620.296 kb on - strand at 620.296 kb on - strand at 620.296 kb on - strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.324 kb on + strand at 620.325 kb on + strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.325 kb on - strand at 620.362 kb on + strand at 620.362 kb on + strand at 620.363 kb on - strand at 620.363 kb on - strand at 620.363 kb on - strand at 620.381 kb on + strand at 620.381 kb on + strand at 620.382 kb on - strand at 620.382 kb on - strand at 620.382 kb on - strand at 620.382 kb on - strand at 620.535 kb on + strand at 620.535 kb on + strand at 620.565 kb on - strand at 620.575 kb on + strand at 620.575 kb on + strand at 620.576 kb on - strand at 620.576 kb on - strand at 620.700 kb on - strand at 620.720 kb on + strand at 620.721 kb on - strand at 620.722 kb on + strand at 620.723 kb on - strand at 620.723 kb on - strand at 620.723 kb on - strand at 620.744 kb on - strand at 620.744 kb on - strand at 620.744 kb on - strand at 620.751 kb on + strand at 620.751 kb on + strand at 620.752 kb on - strand at 620.863 kb on + strand at 620.863 kb on + strand at 620.863 kb on + strand at 620.864 kb on - strand at 620.868 kb on + strand at 620.868 kb on + strand at 620.869 kb on - strand at 620.887 kb on + strand at 620.887 kb on + strand at 620.930 kb on + strand at 620.968 kb on + strand at 620.969 kb on - strand at 620.969 kb on - strand at 620.969 kb on - strand at 621.022 kb on + strand at 621.023 kb on - strand at 621.023 kb on - strand at 621.023 kb on - strand at 621.045 kb on + strand at 621.046 kb on - strand at 621.053 kb on + strand at 621.054 kb on - strand at 621.128 kb on + strand at 621.128 kb on + strand at 621.128 kb on + strand at 621.128 kb on + strand at 621.128 kb on + strand at 621.129 kb on - strand at 621.129 kb on - strand at 621.129 kb on - strand at 621.129 kb on - strand at 621.129 kb on - strand at 621.208 kb on + strand at 621.208 kb on + strand at 621.209 kb on - strand at 621.310 kb on + strand, within Ac3H11_2363 at 621.310 kb on + strand, within Ac3H11_2363 at 621.310 kb on + strand, within Ac3H11_2363 at 621.310 kb on + strand, within Ac3H11_2363 at 621.310 kb on + strand, within Ac3H11_2363 at 621.311 kb on - strand, within Ac3H11_2363 at 621.342 kb on - strand, within Ac3H11_2363 at 621.342 kb on - strand, within Ac3H11_2363 at 621.551 kb on + strand, within Ac3H11_2363 at 621.551 kb on + strand, within Ac3H11_2363 at 621.707 kb on + strand at 621.707 kb on + strand at 621.707 kb on + strand at 621.707 kb on + strand at 621.707 kb on + strand at 621.711 kb on + strand at 621.711 kb on + strand at 621.711 kb on + strand at 621.712 kb on - strand at 621.712 kb on - strand at 621.712 kb on - strand at 621.712 kb on - strand at 621.718 kb on - strand at 621.718 kb on - strand at 621.736 kb on + strand at 621.737 kb on - strand at 621.737 kb on - strand at 621.795 kb on - strand at 621.920 kb on + strand at 621.921 kb on - strand at 621.921 kb on - strand at 621.921 kb on - strand at 621.921 kb on - strand at 622.114 kb on - strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.145 kb on + strand at 622.146 kb on - strand at 622.146 kb on - strand at 622.146 kb on - strand at 622.146 kb on - strand at 622.146 kb on - strand at 622.146 kb on - strand at 622.148 kb on + strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.274 kb on + strand, within Ac3H11_2364 at 622.274 kb on + strand, within Ac3H11_2364 at 622.274 kb on + strand, within Ac3H11_2364 at 622.274 kb on + strand, within Ac3H11_2364 at 622.274 kb on + strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.275 kb on - strand, within Ac3H11_2364 at 622.405 kb on + strand, within Ac3H11_2364 at 622.405 kb on + strand, within Ac3H11_2364 at 622.406 kb on - strand, within Ac3H11_2364 at 622.472 kb on + strand, within Ac3H11_2364 at 622.472 kb on + strand, within Ac3H11_2364 at 622.472 kb on + strand, within Ac3H11_2364 at 622.472 kb on + strand, within Ac3H11_2364 at 622.472 kb on + strand, within Ac3H11_2364 at 622.472 kb on + strand, within Ac3H11_2364 at 622.566 kb on - strand, within Ac3H11_2364 at 622.566 kb on - strand, within Ac3H11_2364 at 622.566 kb on - strand, within Ac3H11_2364
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.004 mg/ml remove 620,225 - -0.2 620,225 - +3.7 620,227 + -1.3 620,227 + +0.9 620,227 + -0.0 620,227 + -0.4 620,228 - -0.5 620,228 - -0.4 620,228 - +0.0 620,228 - -0.2 620,231 + +0.5 620,232 - -0.1 620,232 - -0.1 620,266 + +0.6 620,266 + +0.5 620,266 + -0.5 620,267 - +0.2 620,267 - -1.0 620,267 - -0.0 620,267 - -0.7 620,274 + +0.5 620,274 + -0.2 620,274 + -0.0 620,274 + +0.3 620,274 + -0.1 620,274 + +0.2 620,274 + +0.6 620,274 + -0.7 620,275 - +0.4 620,275 - +0.6 620,275 - -1.2 620,275 - -0.2 620,275 - +0.5 620,275 - +0.3 620,275 - -0.4 620,275 - +0.8 620,277 + +0.6 620,277 + -1.1 620,277 + -1.6 620,278 - -0.3 620,278 - +1.1 620,278 - -0.2 620,278 - -1.0 620,278 - -0.0 620,295 + +0.0 620,295 + +0.2 620,295 + -0.5 620,295 + +0.1 620,295 + -0.8 620,296 - +0.6 620,296 - +0.5 620,296 - -0.4 620,296 - -0.3 620,324 + +3.8 620,324 + -0.1 620,324 + +0.4 620,324 + +0.0 620,324 + -1.0 620,324 + +1.5 620,324 + -0.3 620,324 + +1.3 620,324 + +0.1 620,324 + -0.5 620,324 + +0.2 620,324 + +0.3 620,324 + -0.2 620,324 + +0.2 620,324 + -0.6 620,325 + +0.7 620,325 - -0.7 620,325 - +1.2 620,325 - +0.2 620,325 - -0.0 620,325 - -0.7 620,325 - -0.1 620,325 - -0.3 620,325 - +0.1 620,325 - +0.5 620,325 - -0.5 620,325 - +0.2 620,325 - -0.2 620,325 - -0.8 620,325 - -0.1 620,325 - +0.2 620,325 - -1.0 620,325 - -0.8 620,325 - -0.2 620,362 + -0.1 620,362 + +1.1 620,363 - +0.1 620,363 - -0.1 620,363 - +0.1 620,381 + +0.1 620,381 + +0.5 620,382 - +0.2 620,382 - -0.3 620,382 - -2.0 620,382 - +0.2 620,535 + +0.7 620,535 + +1.6 620,565 - -0.5 620,575 + -0.8 620,575 + -0.0 620,576 - +0.2 620,576 - -0.4 620,700 - -0.5 620,720 + +1.7 620,721 - -1.1 620,722 + -0.1 620,723 - +0.2 620,723 - -0.4 620,723 - +0.2 620,744 - +0.6 620,744 - +0.1 620,744 - +0.9 620,751 + +1.2 620,751 + +0.6 620,752 - +0.0 620,863 + +0.2 620,863 + -0.5 620,863 + +0.1 620,864 - +1.0 620,868 + -2.7 620,868 + +0.5 620,869 - -0.8 620,887 + -0.1 620,887 + +0.9 620,930 + +0.8 620,968 + -1.3 620,969 - -1.2 620,969 - +0.1 620,969 - -0.4 621,022 + -1.1 621,023 - -0.1 621,023 - +0.1 621,023 - -0.7 621,045 + +0.5 621,046 - -0.9 621,053 + +0.5 621,054 - -0.1 621,128 + +0.9 621,128 + +0.1 621,128 + -0.1 621,128 + -1.4 621,128 + +1.8 621,129 - -0.1 621,129 - +0.6 621,129 - -0.3 621,129 - -0.2 621,129 - -0.1 621,208 + -0.9 621,208 + +0.7 621,209 - +0.4 621,310 + Ac3H11_2363 0.22 -0.3 621,310 + Ac3H11_2363 0.22 +1.0 621,310 + Ac3H11_2363 0.22 +0.9 621,310 + Ac3H11_2363 0.22 -1.2 621,310 + Ac3H11_2363 0.22 +0.8 621,311 - Ac3H11_2363 0.22 +0.2 621,342 - Ac3H11_2363 0.30 +0.9 621,342 - Ac3H11_2363 0.30 -1.1 621,551 + Ac3H11_2363 0.84 +0.4 621,551 + Ac3H11_2363 0.84 +0.1 621,707 + +0.2 621,707 + -1.5 621,707 + +0.3 621,707 + +0.1 621,707 + -1.3 621,711 + +0.2 621,711 + +0.1 621,711 + -0.0 621,712 - +1.8 621,712 - -0.2 621,712 - +0.1 621,712 - -0.3 621,718 - +0.4 621,718 - +0.4 621,736 + -0.4 621,737 - +0.6 621,737 - +0.1 621,795 - +1.0 621,920 + +0.3 621,921 - -2.3 621,921 - +0.9 621,921 - -0.5 621,921 - -0.2 622,114 - -0.5 622,145 + -1.2 622,145 + -1.4 622,145 + +0.6 622,145 + +0.7 622,145 + +0.5 622,145 + -0.2 622,145 + +0.7 622,145 + +0.1 622,146 - +0.5 622,146 - +0.0 622,146 - +0.7 622,146 - +0.8 622,146 - +0.0 622,146 - -0.5 622,148 + +1.2 622,149 - -0.1 622,149 - -0.9 622,149 - +1.3 622,149 - -0.7 622,149 - +0.2 622,149 - -0.2 622,274 + Ac3H11_2364 0.15 -0.1 622,274 + Ac3H11_2364 0.15 +0.1 622,274 + Ac3H11_2364 0.15 +0.2 622,274 + Ac3H11_2364 0.15 -0.9 622,274 + Ac3H11_2364 0.15 +0.5 622,275 - Ac3H11_2364 0.15 +0.6 622,275 - Ac3H11_2364 0.15 +0.6 622,275 - Ac3H11_2364 0.15 +0.6 622,275 - Ac3H11_2364 0.15 +0.1 622,275 - Ac3H11_2364 0.15 +0.7 622,275 - Ac3H11_2364 0.15 -0.7 622,275 - Ac3H11_2364 0.15 +3.7 622,405 + Ac3H11_2364 0.21 -0.3 622,405 + Ac3H11_2364 0.21 -0.6 622,406 - Ac3H11_2364 0.21 +0.0 622,472 + Ac3H11_2364 0.24 +0.1 622,472 + Ac3H11_2364 0.24 -1.6 622,472 + Ac3H11_2364 0.24 -0.1 622,472 + Ac3H11_2364 0.24 +0.1 622,472 + Ac3H11_2364 0.24 +0.2 622,472 + Ac3H11_2364 0.24 +0.6 622,566 - Ac3H11_2364 0.28 -0.4 622,566 - Ac3H11_2364 0.28 +0.3 622,566 - Ac3H11_2364 0.28 -0.2
Or see this region's nucleotide sequence