Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1804 and Ac3H11_1805 are separated by 27 nucleotides Ac3H11_1805 and Ac3H11_1806 are separated by 60 nucleotides
Ac3H11_1804 - ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17), at 24,654 to 25,802
_1804
Ac3H11_1805 - Adenylosuccinate synthetase (EC 6.3.4.4), at 25,830 to 27,206
_1805
Ac3H11_1806 - Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22), at 27,267 to 27,791
_1806
Position (kb) 25
26
27
28 Strain fitness (log2 ratio) -2
-1
0
1
2 at 27.192 kb on + strand at 27.192 kb on + strand at 27.192 kb on + strand at 27.192 kb on + strand at 27.192 kb on + strand at 27.192 kb on + strand at 27.192 kb on + strand at 27.192 kb on + strand at 27.193 kb on - strand at 27.193 kb on - strand at 27.193 kb on - strand at 27.205 kb on - strand at 27.236 kb on + strand at 27.236 kb on + strand at 27.294 kb on + strand at 27.294 kb on + strand at 27.294 kb on + strand at 27.295 kb on - strand at 27.295 kb on - strand at 27.295 kb on - strand at 27.295 kb on - strand at 27.303 kb on + strand at 27.303 kb on + strand at 27.303 kb on + strand at 27.304 kb on - strand at 27.313 kb on - strand at 27.371 kb on + strand, within Ac3H11_1806 at 27.371 kb on + strand, within Ac3H11_1806 at 27.435 kb on - strand, within Ac3H11_1806 at 27.465 kb on + strand at 27.465 kb on + strand, within Ac3H11_1806 at 27.610 kb on + strand, within Ac3H11_1806 at 27.610 kb on + strand, within Ac3H11_1806 at 27.610 kb on + strand, within Ac3H11_1806 at 27.611 kb on - strand, within Ac3H11_1806 at 27.611 kb on - strand, within Ac3H11_1806 at 27.611 kb on - strand, within Ac3H11_1806 at 27.611 kb on - strand, within Ac3H11_1806 at 27.611 kb on - strand, within Ac3H11_1806 at 27.611 kb on - strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.621 kb on + strand, within Ac3H11_1806 at 27.622 kb on - strand, within Ac3H11_1806 at 27.622 kb on - strand, within Ac3H11_1806 at 27.622 kb on - strand, within Ac3H11_1806 at 27.622 kb on - strand, within Ac3H11_1806 at 27.622 kb on - strand, within Ac3H11_1806 at 27.690 kb on + strand, within Ac3H11_1806 at 27.690 kb on + strand, within Ac3H11_1806 at 27.691 kb on - strand, within Ac3H11_1806 at 27.691 kb on - strand, within Ac3H11_1806 at 27.744 kb on + strand at 27.744 kb on + strand at 27.744 kb on + strand at 27.745 kb on - strand at 27.745 kb on - strand at 27.745 kb on - strand at 27.792 kb on + strand at 27.792 kb on + strand at 27.792 kb on + strand at 27.792 kb on + strand at 27.793 kb on - strand at 27.793 kb on - strand at 27.843 kb on + strand at 27.843 kb on + strand at 27.843 kb on + strand at 27.843 kb on + strand at 27.843 kb on + strand at 27.844 kb on - strand at 27.844 kb on - strand at 27.870 kb on - strand at 27.870 kb on - strand at 27.918 kb on - strand at 28.011 kb on + strand at 28.011 kb on + strand at 28.131 kb on + strand at 28.156 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.004 mg/ml remove 27,192 + +0.6 27,192 + +0.1 27,192 + +1.0 27,192 + +0.1 27,192 + -0.5 27,192 + +0.1 27,192 + -0.6 27,192 + -0.1 27,193 - +0.7 27,193 - -1.4 27,193 - -1.2 27,205 - -0.2 27,236 + +0.1 27,236 + +2.1 27,294 + +0.8 27,294 + +0.8 27,294 + +1.1 27,295 - -0.0 27,295 - -0.0 27,295 - -0.8 27,295 - +1.3 27,303 + -0.8 27,303 + -0.6 27,303 + -0.0 27,304 - -0.4 27,313 - -0.6 27,371 + Ac3H11_1806 0.20 -0.4 27,371 + Ac3H11_1806 0.20 -2.1 27,435 - Ac3H11_1806 0.32 -0.6 27,465 + +1.6 27,465 + Ac3H11_1806 0.38 +0.8 27,610 + Ac3H11_1806 0.65 -1.4 27,610 + Ac3H11_1806 0.65 +0.3 27,610 + Ac3H11_1806 0.65 +0.5 27,611 - Ac3H11_1806 0.66 +0.7 27,611 - Ac3H11_1806 0.66 -1.2 27,611 - Ac3H11_1806 0.66 -0.0 27,611 - Ac3H11_1806 0.66 +1.6 27,611 - Ac3H11_1806 0.66 +0.1 27,611 - Ac3H11_1806 0.66 +0.7 27,621 + Ac3H11_1806 0.67 -0.4 27,621 + Ac3H11_1806 0.67 +0.1 27,621 + Ac3H11_1806 0.67 +0.1 27,621 + Ac3H11_1806 0.67 +0.6 27,621 + Ac3H11_1806 0.67 +0.6 27,621 + Ac3H11_1806 0.67 +0.1 27,621 + Ac3H11_1806 0.67 -1.1 27,621 + Ac3H11_1806 0.67 +1.3 27,622 - Ac3H11_1806 0.68 +1.6 27,622 - Ac3H11_1806 0.68 +0.6 27,622 - Ac3H11_1806 0.68 +0.1 27,622 - Ac3H11_1806 0.68 -0.9 27,622 - Ac3H11_1806 0.68 -0.8 27,690 + Ac3H11_1806 0.81 -0.4 27,690 + Ac3H11_1806 0.81 -0.0 27,691 - Ac3H11_1806 0.81 +0.3 27,691 - Ac3H11_1806 0.81 -0.3 27,744 + -0.8 27,744 + -0.4 27,744 + +0.1 27,745 - +1.0 27,745 - -0.0 27,745 - -1.0 27,792 + +0.4 27,792 + +0.2 27,792 + -0.2 27,792 + +0.4 27,793 - -1.0 27,793 - -0.4 27,843 + +0.0 27,843 + +0.9 27,843 + -1.4 27,843 + +0.4 27,843 + -0.9 27,844 - -0.8 27,844 - -0.6 27,870 - -1.0 27,870 - -0.8 27,918 - +1.8 28,011 + -0.1 28,011 + +0.4 28,131 + +0.2 28,156 + -0.4
Or see this region's nucleotide sequence