Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29285

Experiment: Vancomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 1 mg/ml
6,360,394	+		AO353_29275	0.34	-0.4
6,360,482	+		AO353_29275	0.47	+0.2
6,360,482	+		AO353_29275	0.47	-1.0
6,360,483	-		AO353_29275	0.47	+0.1
6,360,520	-		AO353_29275	0.52	-0.4
6,360,526	+		AO353_29275	0.53	+0.4
6,360,526	+		AO353_29275	0.53	-0.6
6,360,527	-		AO353_29275	0.53	-0.1
6,360,543	+		AO353_29275	0.56	+0.5
6,360,547	+		AO353_29275	0.56	-0.1
6,360,547	+		AO353_29275	0.56	-0.8
6,360,548	-		AO353_29275	0.56	-0.0
6,360,548	-		AO353_29275	0.56	-0.8
6,360,548	-		AO353_29275	0.56	-0.8
6,360,620	-		AO353_29275	0.67	-1.2
6,360,630	+		AO353_29275	0.68	-1.0
6,360,637	+		AO353_29275	0.69	+0.6
6,360,656	-		AO353_29275	0.72	-0.5
6,360,660	-		AO353_29275	0.72	-0.8
6,360,660	-		AO353_29275	0.72	-0.3
6,360,664	-		AO353_29275	0.73	-0.1
6,361,065	+		AO353_29280	0.40	-1.2
6,361,071	-		AO353_29280	0.42	-1.4
6,361,154	+		AO353_29280	0.59	-0.1
6,361,155	-		AO353_29280	0.59	+0.2
6,361,156	+		AO353_29280	0.59	-0.3
6,361,157	-		AO353_29280	0.60	+0.5
6,361,158	+		AO353_29280	0.60	+1.2
6,361,236	-		AO353_29280	0.76	+0.2
6,361,258	-		AO353_29280	0.81	+2.2
6,361,329	+				+0.2
6,361,329	+				-0.3
6,361,406	-				-0.1
6,361,476	+		AO353_29285	0.16	-1.6
6,361,476	+		AO353_29285	0.16	-0.5
6,361,476	+		AO353_29285	0.16	-0.1
6,361,504	+		AO353_29285	0.21	-2.0
6,361,611	+		AO353_29285	0.41	-1.6
6,361,612	-		AO353_29285	0.41	-1.4
6,361,719	+		AO353_29285	0.60	-0.2
6,361,719	+				-0.4
6,361,719	+		AO353_29285	0.60	-0.6
6,361,719	+		AO353_29285	0.60	-0.8
6,361,719	+		AO353_29285	0.60	-0.9
6,361,719	+		AO353_29285	0.60	-0.7
6,361,719	+		AO353_29285	0.60	-1.0
6,361,719	+		AO353_29285	0.60	-0.6
6,361,720	-		AO353_29285	0.60	-0.8
6,361,720	-		AO353_29285	0.60	-1.5
6,361,720	-		AO353_29285	0.60	+1.2
6,361,720	-		AO353_29285	0.60	-1.0
6,361,720	-		AO353_29285	0.60	-1.1
6,361,720	-		AO353_29285	0.60	-2.0
6,361,720	-		AO353_29285	0.60	-0.5
6,361,720	-		AO353_29285	0.60	-1.1
6,361,720	-		AO353_29285	0.60	-0.6
6,361,896	+				-1.8
6,361,897	-				+0.7
6,361,910	+				-0.5
6,361,910	+				-0.8
6,361,910	+				-0.1
6,361,910	+				-1.1
6,361,910	+				+0.2
6,361,911	-				-0.7
6,361,945	+				+0.5
6,361,945	+				+0.1
6,361,945	+				-0.4
6,361,945	+				+1.2
6,361,945	+				+0.1
6,361,945	+				-0.5
6,361,945	+				+2.5
6,361,945	+				-0.6
6,361,945	+				-0.6
6,361,945	+				-0.5
6,361,945	+				-2.4
6,361,945	+				+0.6
6,361,946	-				+1.6
6,361,946	-				-0.2
6,361,946	-				-1.4
6,361,946	-				-1.1
6,361,946	-				+0.3
6,361,946	-				+0.7
6,361,946	-				+0.4
6,361,946	-				-0.2
6,361,946	-				-0.8
6,361,946	-				+0.7
6,361,946	-				+1.2
6,361,946	-				-0.0
6,361,946	-				-0.6
6,361,960	+				-2.1
6,361,961	-				-1.4
6,362,004	-				+0.6
6,362,046	+				-0.6
6,362,046	+				-1.1
6,362,093	+				+0.1
6,362,143	+				-0.4
6,362,143	+				+0.6
6,362,143	+				+0.1
6,362,143	+				+0.3
6,362,143	+				+0.6
6,362,144	-				-0.7
6,362,144	-				+0.3
6,362,144	-				-1.0
6,362,144	-				-0.6
6,362,170	+				+0.4
6,362,170	+				+0.2
6,362,170	+				-1.1
6,362,171	-				+0.7
6,362,171	-				-2.5
6,362,171	-				+1.0
6,362,173	+				-0.8
6,362,173	+				-1.4
6,362,174	-				-0.5
6,362,336	-		AO353_29290	0.15	-0.4
6,362,347	+		AO353_29290	0.16	-1.1
6,362,347	+		AO353_29290	0.16	-0.8
6,362,347	+		AO353_29290	0.16	+0.3
6,362,347	+		AO353_29290	0.16	+0.6
6,362,347	+		AO353_29290	0.16	+0.8
6,362,347	+		AO353_29290	0.16	+0.7
6,362,347	+		AO353_29290	0.16	-0.7
6,362,347	+		AO353_29290	0.16	-0.3
6,362,347	+		AO353_29290	0.16	+0.8
6,362,347	+		AO353_29290	0.16	+0.7
6,362,347	+		AO353_29290	0.16	-0.4
6,362,347	+		AO353_29290	0.16	-1.0
6,362,347	+		AO353_29290	0.16	-0.0
6,362,347	+		AO353_29290	0.16	-0.7
6,362,348	-		AO353_29290	0.16	+1.6
6,362,348	-		AO353_29290	0.16	+0.5
6,362,348	-		AO353_29290	0.16	-0.2
6,362,348	-		AO353_29290	0.16	-0.9
6,362,348	-		AO353_29290	0.16	+0.2
6,362,348	-		AO353_29290	0.16	+0.5
6,362,348	-		AO353_29290	0.16	+0.1
6,362,350	+		AO353_29290	0.16	-0.5
6,362,351	-		AO353_29290	0.16	+1.5
6,362,513	-		AO353_29290	0.29	+1.2
6,362,531	-		AO353_29290	0.30	-1.4
6,362,531	-		AO353_29290	0.30	-0.8
6,362,563	+		AO353_29290	0.33	+0.4
6,362,563	+		AO353_29290	0.33	-0.3
6,362,563	+		AO353_29290	0.33	-1.1
6,362,564	-		AO353_29290	0.33	+0.2
6,362,575	+		AO353_29290	0.34	-1.1
6,362,575	+		AO353_29290	0.34	+0.2
6,362,575	+		AO353_29290	0.34	-0.1
6,362,575	+		AO353_29290	0.34	+1.0
6,362,576	-		AO353_29290	0.34	-0.2
6,362,576	-		AO353_29290	0.34	-0.9
6,362,576	-		AO353_29290	0.34	-0.1
6,362,596	+		AO353_29290	0.35	+1.0
6,362,596	+		AO353_29290	0.35	+0.7
6,362,596	+		AO353_29290	0.35	-1.9
6,362,596	+		AO353_29290	0.35	-0.3
6,362,596	+		AO353_29290	0.35	+0.2
6,362,597	-		AO353_29290	0.35	-0.5
6,362,597	-		AO353_29290	0.35	-0.0
6,362,597	-		AO353_29290	0.35	-0.0
6,362,713	+		AO353_29290	0.44	-0.5
6,362,713	+		AO353_29290	0.44	-1.1
6,362,713	+		AO353_29290	0.44	-0.3
6,362,737	+		AO353_29290	0.46	+1.2
6,362,737	+		AO353_29290	0.46	+1.0
6,362,737	+		AO353_29290	0.46	-0.8
6,362,737	+		AO353_29290	0.46	-0.7
6,362,737	+		AO353_29290	0.46	-1.0
6,362,738	-		AO353_29290	0.46	-0.3
6,362,738	-		AO353_29290	0.46	-0.4
6,362,788	+		AO353_29290	0.50	+0.6
6,362,788	+		AO353_29290	0.50	-0.6
6,362,789	-		AO353_29290	0.50	-1.1
6,362,818	+		AO353_29290	0.53	-0.9
6,362,818	+		AO353_29290	0.53	-0.1
6,362,818	+		AO353_29290	0.53	+0.5
6,362,819	-		AO353_29290	0.53	-0.4
6,362,917	+		AO353_29290	0.60	+0.4
6,362,917	+		AO353_29290	0.60	+0.7
6,362,917	+		AO353_29290	0.60	-0.1
6,362,917	+		AO353_29290	0.60	+0.2
6,362,917	+		AO353_29290	0.60	-0.4
6,362,917	+		AO353_29290	0.60	-1.4
6,362,917	+		AO353_29290	0.60	-1.5
6,362,918	-				+1.2
6,362,918	-		AO353_29290	0.60	+0.9
6,362,918	-		AO353_29290	0.60	+0.2
6,362,918	-		AO353_29290	0.60	+0.2