Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26880

Experiment: Vancomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 1 mg/ml
5,891,217	-		AO353_26875	0.12	-2.9
5,891,217	-		AO353_26875	0.12	+1.5
5,891,217	-		AO353_26875	0.12	+0.5
5,891,377	+		AO353_26875	0.28	+0.7
5,891,377	+		AO353_26875	0.28	-1.9
5,891,378	-		AO353_26875	0.28	-2.0
5,891,378	-		AO353_26875	0.28	-0.1
5,891,378	-		AO353_26875	0.28	-0.3
5,891,418	+		AO353_26875	0.32	-0.4
5,891,418	+		AO353_26875	0.32	-0.1
5,891,418	+		AO353_26875	0.32	-1.2
5,891,748	+		AO353_26875	0.66	+0.1
5,891,749	-		AO353_26875	0.66	-0.4
5,891,802	+		AO353_26875	0.72	-0.4
5,891,802	+		AO353_26875	0.72	+0.5
5,891,802	+		AO353_26875	0.72	-0.8
5,891,802	+		AO353_26875	0.72	+0.1
5,891,802	+		AO353_26875	0.72	+0.4
5,891,803	-		AO353_26875	0.72	-1.7
5,891,803	-		AO353_26875	0.72	-0.9
5,891,803	-		AO353_26875	0.72	+1.3
5,891,833	+		AO353_26875	0.75	+1.5
5,892,130	+				+0.4
5,892,131	-				+0.1
5,892,170	+				+0.4
5,892,170	+				+1.1
5,892,170	+				-0.1
5,892,170	+				-0.7
5,892,170	+				+0.1
5,892,170	+				+0.0
5,892,190	+				-0.2
5,892,191	-				-0.1
5,892,191	-				-1.4
5,892,197	+				-1.3
5,892,197	+				-0.6
5,892,198	-				+0.6
5,892,210	-				+1.1
5,892,210	-				-1.0
5,892,210	-				+0.6
5,892,227	+				-0.6
5,892,227	+				+0.6
5,892,228	-				+1.1
5,892,228	-				+1.3
5,892,347	+		AO353_26880	0.16	+0.9
5,892,347	+		AO353_26880	0.16	-0.0
5,892,348	-		AO353_26880	0.16	-2.8
5,892,348	-		AO353_26880	0.16	-0.4
5,892,440	+		AO353_26880	0.24	+0.5
5,892,440	+		AO353_26880	0.24	-0.2
5,892,441	-		AO353_26880	0.24	-1.2
5,892,441	-		AO353_26880	0.24	-0.4
5,892,553	+		AO353_26880	0.32	+0.3
5,892,553	+		AO353_26880	0.32	-0.4
5,892,553	+		AO353_26880	0.32	-0.1
5,892,553	+		AO353_26880	0.32	-0.7
5,892,554	-		AO353_26880	0.32	-1.7
5,892,682	+		AO353_26880	0.42	-0.3
5,892,682	+		AO353_26880	0.42	-1.9
5,892,682	+		AO353_26880	0.42	+1.1
5,892,876	-		AO353_26880	0.57	-0.4
5,892,962	+		AO353_26880	0.64	+0.3
5,893,050	+		AO353_26880	0.71	+0.3
5,893,050	+		AO353_26880	0.71	-1.9
5,893,051	-		AO353_26880	0.71	+1.3
5,893,051	-		AO353_26880	0.71	-1.4
5,893,079	+		AO353_26880	0.73	+1.9
5,893,079	+		AO353_26880	0.73	+0.5
5,893,079	+		AO353_26880	0.73	-1.0
5,893,079	+		AO353_26880	0.73	-2.2
5,893,141	+		AO353_26880	0.78	+0.6
5,893,141	+		AO353_26880	0.78	+0.3
5,893,141	+		AO353_26880	0.78	+0.1
5,893,141	+		AO353_26880	0.78	+2.7
5,893,141	+		AO353_26880	0.78	-0.7
5,893,141	+				+0.1
5,893,142	-				-0.9
5,893,142	-		AO353_26880	0.78	+2.1
5,893,142	-		AO353_26880	0.78	+0.1
5,893,142	-		AO353_26880	0.78	-0.4
5,893,142	-		AO353_26880	0.78	-0.1
5,893,142	-		AO353_26880	0.78	+0.7
5,893,145	+		AO353_26880	0.78	-0.4
5,893,145	+		AO353_26880	0.78	-2.2
5,893,145	+		AO353_26880	0.78	-0.7
5,893,145	+		AO353_26880	0.78	-0.0
5,893,145	+		AO353_26880	0.78	+0.1
5,893,145	+		AO353_26880	0.78	+1.4
5,893,145	+		AO353_26880	0.78	+0.1
5,893,145	+		AO353_26880	0.78	-0.1
5,893,145	+		AO353_26880	0.78	-0.4
5,893,146	-		AO353_26880	0.78	-1.1
5,893,146	-		AO353_26880	0.78	-0.4
5,893,146	-		AO353_26880	0.78	+2.3
5,893,146	-		AO353_26880	0.78	+0.2
5,893,262	+		AO353_26880	0.87	-1.2
5,893,263	-		AO353_26880	0.87	+0.4
5,893,263	-		AO353_26880	0.87	-0.3
5,893,263	-		AO353_26880	0.87	+1.9
5,893,275	-		AO353_26880	0.88	-0.8
5,893,310	+				+1.9
5,893,345	-				-0.2
5,893,476	-				-0.2
5,893,691	+		AO353_26885	0.24	+0.3
5,893,691	+		AO353_26885	0.24	-0.9
5,893,692	-		AO353_26885	0.24	-0.9
5,893,692	-		AO353_26885	0.24	-0.2
5,893,692	-		AO353_26885	0.24	-2.9
5,893,692	-		AO353_26885	0.24	-1.7
5,893,692	-		AO353_26885	0.24	-0.6
5,893,704	-		AO353_26885	0.25	-0.3
5,893,881	+		AO353_26885	0.43	+0.6
5,893,881	+		AO353_26885	0.43	+1.4
5,893,882	-		AO353_26885	0.43	+0.5
5,893,882	-		AO353_26885	0.43	+0.7
5,893,882	-		AO353_26885	0.43	-1.6
5,893,882	-		AO353_26885	0.43	-1.7
5,893,882	-		AO353_26885	0.43	-1.4
5,893,882	-				+2.7
5,893,882	-		AO353_26885	0.43	+0.1
5,893,882	-		AO353_26885	0.43	+0.6
5,893,882	-		AO353_26885	0.43	+0.1
5,893,984	+		AO353_26885	0.54	+0.1
5,893,985	-		AO353_26885	0.54	+0.1
5,894,143	+		AO353_26885	0.70	-1.2
5,894,143	+		AO353_26885	0.70	+0.3
5,894,143	+		AO353_26885	0.70	+0.7
5,894,144	-		AO353_26885	0.70	+0.1
5,894,149	+		AO353_26885	0.70	+0.7
5,894,149	+		AO353_26885	0.70	-0.7
5,894,149	+		AO353_26885	0.70	-1.4
5,894,150	-		AO353_26885	0.71	-0.9
5,894,155	+		AO353_26885	0.71	-1.7
5,894,155	+		AO353_26885	0.71	-0.6
5,894,155	+		AO353_26885	0.71	+1.4
5,894,155	+		AO353_26885	0.71	+1.7
5,894,156	-		AO353_26885	0.71	-1.7
5,894,156	-		AO353_26885	0.71	+0.2