Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12935

Experiment: Vancomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 1 mg/ml
2,863,351	+		AO353_12930	0.56	+0.0
2,863,351	+		AO353_12930	0.56	-2.6
2,863,648	-		AO353_12930	0.77	-0.7
2,863,754	+		AO353_12930	0.85	-2.8
2,863,754	+		AO353_12930	0.85	+1.1
2,863,754	+		AO353_12930	0.85	-0.7
2,863,754	+		AO353_12930	0.85	-1.3
2,863,754	+		AO353_12930	0.85	-1.1
2,863,754	+		AO353_12930	0.85	-0.7
2,863,772	+		AO353_12930	0.86	-0.7
2,863,966	+				+0.4
2,863,966	+				+0.1
2,863,966	+				+0.3
2,863,966	+				+0.5
2,864,063	+				-0.4
2,864,063	+				-2.0
2,864,063	+				+0.3
2,864,220	+		AO353_12935	0.17	-1.6
2,864,320	+		AO353_12935	0.28	-0.7
2,864,320	+		AO353_12935	0.28	-1.7
2,864,320	+		AO353_12935	0.28	+0.4
2,864,320	+		AO353_12935	0.28	-0.4
2,864,335	+		AO353_12935	0.29	-1.4
2,864,335	+		AO353_12935	0.29	-0.7
2,864,335	+		AO353_12935	0.29	-1.3
2,864,359	+		AO353_12935	0.32	-1.0
2,864,523	+		AO353_12935	0.49	-1.9
2,864,539	+		AO353_12935	0.51	+0.0
2,864,775	+		AO353_12935	0.75	-1.1
2,864,913	+		AO353_12935	0.90	-1.0
2,864,913	+		AO353_12935	0.90	-2.3
2,864,913	+		AO353_12935	0.90	-1.4
2,864,925	+				+1.6
2,864,925	+				-1.0
2,864,925	+				-2.7
2,865,043	+				+0.1
2,865,043	+				+0.6
2,865,043	+				+1.4
2,865,043	+				+0.3
2,865,044	-				+0.4
2,865,045	+				-0.3
2,865,045	+				+0.0
2,865,045	+				+0.2
2,865,045	+				+1.4
2,865,046	-				-1.9
2,865,046	-				-0.3
2,865,046	-				-0.3
2,865,046	-				+0.1
2,865,046	-				+0.2
2,865,049	+				+0.4
2,865,049	+				+0.5
2,865,049	+				-0.9
2,865,049	+				+0.5
2,865,049	+				-0.1
2,865,049	+				-0.9
2,865,050	-				-0.9
2,865,050	-				-2.5
2,865,050	-				-1.7
2,865,096	+				+2.0
2,865,096	+				+1.6
2,865,097	-				-0.6
2,865,103	-				-1.0
2,865,130	+				-1.7
2,865,131	-				-0.5
2,865,161	+				-1.9
2,865,161	+				+0.2
2,865,161	+				-2.2
2,865,161	+				-0.3
2,865,161	+				-0.8
2,865,162	-				-1.9
2,865,162	-				-2.7
2,865,162	-				+0.6
2,865,162	-				+0.3
2,865,162	-				-1.7
2,865,162	-				-1.0
2,865,162	-				-0.7
2,865,173	+				-1.8
2,865,173	+				-2.2
2,865,173	+				-0.5
2,865,173	+				+0.6
2,865,174	-				-0.6
2,865,174	-				-3.5
2,865,195	+				-0.8
2,865,195	+				+0.1
2,865,196	-				-1.2
2,865,196	-				-2.2
2,865,196	-				-3.0
2,865,196	-				-0.9
2,865,196	-				-1.9
2,865,331	+		AO353_12940	0.22	-0.9
2,865,362	+		AO353_12940	0.25	-1.9
2,865,362	+		AO353_12940	0.25	+0.1
2,865,363	-		AO353_12940	0.25	-0.3
2,865,363	-		AO353_12940	0.25	+0.0
2,865,363	-		AO353_12940	0.25	-1.7
2,865,440	+		AO353_12940	0.32	-1.2
2,865,563	+		AO353_12940	0.43	+0.5
2,865,563	+		AO353_12940	0.43	+0.0
2,865,563	+		AO353_12940	0.43	-0.4
2,865,563	+		AO353_12940	0.43	-0.3
2,865,564	-		AO353_12940	0.43	-1.0
2,865,692	+		AO353_12940	0.54	-0.5
2,865,693	-		AO353_12940	0.55	-1.7
2,865,854	+		AO353_12940	0.69	-1.0
2,865,854	+		AO353_12940	0.69	-1.7
2,865,854	+		AO353_12940	0.69	-1.1
2,865,854	+		AO353_12940	0.69	-0.7
2,865,855	-		AO353_12940	0.69	-0.6
2,865,855	-		AO353_12940	0.69	-1.6
2,865,855	-		AO353_12940	0.69	-1.4
2,865,855	-		AO353_12940	0.69	-2.7
2,865,855	-		AO353_12940	0.69	-1.2
2,865,855	-		AO353_12940	0.69	-1.9
2,865,857	+		AO353_12940	0.69	-1.0
2,865,857	+		AO353_12940	0.69	+0.2
2,865,858	-		AO353_12940	0.69	+0.6