Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12345

Experiment: Vancomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 1 mg/ml
2,717,392	+				+1.0
2,717,392	+				-1.8
2,717,393	-				+0.9
2,717,393	-				+1.3
2,717,393	-				-0.6
2,717,393	-				-1.0
2,717,393	-				+1.1
2,717,393	-				-0.1
2,717,393	-				+1.1
2,717,411	-				-0.7
2,717,411	-				+0.8
2,717,421	+				+1.4
2,717,421	+				+0.5
2,717,421	+				+1.9
2,717,422	-				-0.2
2,717,422	-				+1.6
2,717,422	-				+1.7
2,717,431	+				-0.5
2,717,431	+				+0.3
2,717,431	+				-0.5
2,717,431	+				+0.5
2,717,431	+				-0.8
2,717,431	+				+0.5
2,717,431	+				-0.1
2,717,431	+				-1.2
2,717,432	-				-1.4
2,717,432	-				-1.6
2,717,432	-				-0.4
2,717,432	-				-0.4
2,717,432	-				-0.4
2,717,433	+				+0.5
2,717,433	+				+1.0
2,717,433	+				-2.8
2,717,433	+				-0.3
2,717,434	-				+1.0
2,717,434	-				+0.3
2,717,434	-				-0.0
2,717,443	-				+0.4
2,717,466	+				-0.1
2,717,466	+				-2.1
2,717,466	+				-0.1
2,717,466	+				-0.3
2,717,466	+				+0.9
2,717,541	+				+1.2
2,717,541	+				+0.2
2,717,541	+				-0.4
2,717,630	-				+0.0
2,717,630	-				+0.5
2,717,630	-				-1.1
2,717,735	-		AO353_12340	0.15	-2.2
2,718,425	+		AO353_12345	0.12	+0.7
2,718,552	+		AO353_12345	0.28	+0.0
2,718,739	-		AO353_12345	0.51	-1.0
2,718,817	-		AO353_12345	0.61	+0.6
2,718,817	-		AO353_12345	0.61	+0.0
2,718,991	-		AO353_12345	0.83	-1.5
2,719,171	-		AO353_12350	0.11	-0.7
2,719,171	-		AO353_12350	0.11	-0.1
2,719,171	-		AO353_12350	0.11	-0.6
2,719,171	-		AO353_12350	0.11	+0.6
2,719,171	-		AO353_12350	0.11	-0.2
2,719,171	-		AO353_12350	0.11	+0.0
2,719,189	-		AO353_12350	0.15	+1.1
2,719,189	-		AO353_12350	0.15	-1.0
2,719,189	-		AO353_12350	0.15	+0.9
2,719,189	-		AO353_12350	0.15	-2.7
2,719,571	-				-1.6
2,719,613	-		AO353_12355	0.12	+1.1
2,719,878	-				-2.5
2,719,997	+		AO353_12360	0.33	-1.8
2,719,997	+		AO353_12360	0.33	-1.2
2,719,997	+		AO353_12360	0.33	-2.0
2,719,997	+		AO353_12360	0.33	-1.2
2,719,997	+		AO353_12360	0.33	+0.6
2,719,998	-		AO353_12360	0.33	-0.6
2,719,998	-		AO353_12360	0.33	-0.0
2,719,998	-		AO353_12360	0.33	+0.4
2,719,998	-		AO353_12360	0.33	-0.5
2,719,998	-		AO353_12360	0.33	-0.8
2,719,998	-		AO353_12360	0.33	+0.7
2,719,998	-		AO353_12360	0.33	-0.8
2,719,998	-		AO353_12360	0.33	-0.1
2,720,000	+		AO353_12360	0.34	-1.0
2,720,000	+		AO353_12360	0.34	-1.0
2,720,000	+		AO353_12360	0.34	-0.8
2,720,001	-		AO353_12360	0.34	+1.6
2,720,001	-		AO353_12360	0.34	-2.3
2,720,001	-		AO353_12360	0.34	-0.4
2,720,001	-		AO353_12360	0.34	+1.1
2,720,001	-		AO353_12360	0.34	+0.3
2,720,001	-		AO353_12360	0.34	+0.9
2,720,026	+		AO353_12360	0.42	-1.7
2,720,027	-		AO353_12360	0.42	+0.9
2,720,027	-		AO353_12360	0.42	+0.8
2,720,031	+		AO353_12360	0.43	+0.0
2,720,031	+		AO353_12360	0.43	-1.0
2,720,031	+		AO353_12360	0.43	-1.2
2,720,031	+				-0.4
2,720,031	+		AO353_12360	0.43	-0.1
2,720,031	+		AO353_12360	0.43	-1.4
2,720,032	-		AO353_12360	0.44	+0.7
2,720,032	-		AO353_12360	0.44	-0.7
2,720,032	-		AO353_12360	0.44	-0.6
2,720,032	-		AO353_12360	0.44	-1.2
2,720,032	-		AO353_12360	0.44	+0.5
2,720,032	-		AO353_12360	0.44	-0.4
2,720,032	-		AO353_12360	0.44	-1.1
2,720,032	-		AO353_12360	0.44	+0.6
2,720,032	-		AO353_12360	0.44	+1.0