Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08880

Experiment: Vancomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 1 mg/ml
1,949,220	-				-1.4
1,949,220	-				+0.6
1,949,237	+				+0.1
1,949,237	+				+1.3
1,949,237	+				+2.2
1,949,237	+				+0.1
1,949,237	+				-0.4
1,949,237	+				+0.3
1,949,237	+				-0.4
1,949,237	+				+0.9
1,949,237	+				+0.2
1,949,237	+				+0.8
1,949,238	-				-0.6
1,949,238	-				-1.1
1,949,238	-				+0.6
1,949,238	-				-0.9
1,949,238	-				+0.3
1,949,238	-				+1.3
1,949,238	-				-0.1
1,949,238	-				-0.4
1,949,238	-				+1.4
1,949,238	-				+0.1
1,949,238	-				+3.1
1,949,238	-				+0.7
1,949,238	-				-1.2
1,949,238	-				+0.8
1,949,238	-				+0.1
1,949,241	+				+0.6
1,949,241	+				+0.5
1,949,241	+				+1.4
1,949,241	+				-0.7
1,949,241	+				-0.9
1,949,241	+				-1.5
1,949,241	+				-0.4
1,949,241	+				+0.2
1,949,242	-				-0.4
1,949,242	-				-0.0
1,949,242	-				-0.5
1,949,242	-				-0.8
1,949,242	-				-0.5
1,949,242	-				+0.7
1,949,245	-				+0.6
1,949,403	+		AO353_08875	0.26	+0.8
1,949,403	+		AO353_08875	0.26	+1.1
1,949,403	+		AO353_08875	0.26	-0.4
1,949,404	-		AO353_08875	0.27	-1.9
1,949,993	+				-0.0
1,949,993	+				+0.8
1,949,993	+				-0.0
1,949,993	+				-0.7
1,950,020	+				-0.1
1,950,020	+				-0.1
1,950,021	-				-0.3
1,950,089	+				+0.4
1,950,090	-				-1.7
1,950,090	-				-0.7
1,950,121	+				+0.3
1,950,121	+				-0.4
1,950,122	-				-0.8
1,950,122	-				+1.9
1,950,122	-				-0.7
1,950,122	-				+1.6
1,950,122	-				-1.2
1,950,122	-				+0.4
1,950,122	-				+1.4
1,950,122	-				-1.3
1,950,122	-				+2.0
1,950,132	+				+0.3
1,950,132	+				+0.6
1,950,132	+				+0.3
1,950,133	-				+1.3
1,950,133	-				+0.6
1,950,133	-				-0.2
1,950,273	-				-0.7
1,950,576	+		AO353_08880	0.25	-1.7
1,950,577	-		AO353_08880	0.25	-1.5
1,950,577	-		AO353_08880	0.25	-1.4
1,950,774	+		AO353_08880	0.38	+1.6
1,950,774	+		AO353_08880	0.38	-1.4
1,950,776	+		AO353_08880	0.38	-0.9
1,951,359	+		AO353_08880	0.77	-0.7
1,951,360	-		AO353_08880	0.77	+1.1
1,951,683	-				-1.1
1,951,726	-				+0.6
1,951,767	+				-1.2
1,951,767	+				-0.4
1,951,768	-				+0.2
1,951,860	+				+1.1
1,951,860	+				+0.0
1,951,861	-				+1.1
1,951,861	-				-0.1
1,951,908	+				+0.6
1,951,908	+				+0.3
1,951,909	-				+0.2
1,951,909	-				+0.6
1,951,909	-				-0.6
1,951,909	-				+0.5
1,951,909	-				+0.1
1,951,909	-				+0.7
1,952,049	+		AO353_08885	0.13	+0.8
1,952,049	+		AO353_08885	0.13	-0.0
1,952,049	+		AO353_08885	0.13	-0.6
1,952,049	+		AO353_08885	0.13	+2.0
1,952,049	+		AO353_08885	0.13	+0.2
1,952,049	+		AO353_08885	0.13	-0.8
1,952,049	+		AO353_08885	0.13	-0.9
1,952,050	-		AO353_08885	0.13	+0.4
1,952,050	-		AO353_08885	0.13	+0.5
1,952,050	-		AO353_08885	0.13	+2.6
1,952,150	+		AO353_08885	0.17	-1.1
1,952,190	+		AO353_08885	0.19	+0.2
1,952,190	+		AO353_08885	0.19	+0.8
1,952,190	+		AO353_08885	0.19	-0.6
1,952,190	+		AO353_08885	0.19	+0.7
1,952,190	+		AO353_08885	0.19	+0.2
1,952,190	+		AO353_08885	0.19	+0.8
1,952,191	-		AO353_08885	0.19	-0.6
1,952,191	-		AO353_08885	0.19	+0.6
1,952,191	-		AO353_08885	0.19	-0.3
1,952,191	-		AO353_08885	0.19	+0.1
1,952,353	+				+2.5
1,952,353	+		AO353_08885	0.27	-0.2
1,952,354	-		AO353_08885	0.27	-0.3
1,952,354	-		AO353_08885	0.27	-0.0
1,952,354	-		AO353_08885	0.27	+1.3
1,952,427	+		AO353_08885	0.30	+0.2
1,952,428	-		AO353_08885	0.30	+0.5
1,952,428	-		AO353_08885	0.30	+1.1
1,952,437	-		AO353_08885	0.30	-0.9
1,952,460	+		AO353_08885	0.31	+0.1
1,952,460	+		AO353_08885	0.31	-0.0
1,952,460	+		AO353_08885	0.31	-0.0
1,952,460	+		AO353_08885	0.31	+0.4
1,952,460	+		AO353_08885	0.31	-0.4
1,952,460	+		AO353_08885	0.31	-0.7
1,952,460	+		AO353_08885	0.31	+0.6
1,952,460	+		AO353_08885	0.31	-0.7
1,952,461	-		AO353_08885	0.31	+0.0
1,952,461	-		AO353_08885	0.31	+0.3
1,952,461	-		AO353_08885	0.31	+0.6
1,952,461	-		AO353_08885	0.31	-1.6
1,952,461	-		AO353_08885	0.31	-0.1
1,952,461	-		AO353_08885	0.31	+0.6
1,952,485	-		AO353_08885	0.32	+1.2
1,952,560	-		AO353_08885	0.36	+0.4