Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04850

Experiment: Vancomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 1 mg/ml
1,071,425	+		AO353_04845	0.79	+0.8
1,071,425	+		AO353_04845	0.79	-0.0
1,071,426	-		AO353_04845	0.79	-0.4
1,071,450	+		AO353_04845	0.81	-0.1
1,071,450	+		AO353_04845	0.81	+0.5
1,071,451	-		AO353_04845	0.81	+0.3
1,071,474	+		AO353_04845	0.84	+0.3
1,071,483	+		AO353_04845	0.85	+0.3
1,071,483	+		AO353_04845	0.85	-0.2
1,071,484	-		AO353_04845	0.85	-0.3
1,071,484	-		AO353_04845	0.85	+0.1
1,071,484	-		AO353_04845	0.85	-1.8
1,071,498	+		AO353_04845	0.86	+0.3
1,071,498	+		AO353_04845	0.86	+0.1
1,071,531	+		AO353_04845	0.89	+0.1
1,071,532	-		AO353_04845	0.90	+0.5
1,071,532	-		AO353_04845	0.90	+1.1
1,071,588	+				+1.0
1,071,588	+				-0.3
1,071,589	-				-1.1
1,071,589	-				-1.0
1,071,589	-				-1.7
1,071,831	+				-0.7
1,071,831	+				-2.4
1,071,832	-				-0.5
1,071,832	-				-0.7
1,071,832	-				-1.9
1,071,832	-				-0.1
1,071,953	-				-1.0
1,071,953	-				+0.5
1,071,957	+				+1.7
1,071,957	+				-0.8
1,071,957	+				+0.2
1,071,957	+				+0.3
1,071,958	-				-2.9
1,071,958	-				-1.1
1,071,958	-				-0.0
1,071,966	+				-2.7
1,071,967	-				+0.6
1,072,074	-				-1.9
1,072,074	-				-0.4
1,072,122	-				+0.6
1,072,122	-				-0.4
1,072,210	-				+0.1
1,072,210	-				+2.5
1,072,210	-				+0.6
1,072,383	+				-1.0
1,072,383	+				+0.5
1,072,383	+				+0.3
1,072,383	+				+0.9
1,072,384	-				-0.3
1,072,384	-				-1.8
1,072,384	-				-1.7
1,072,384	-				+1.9
1,072,384	-				+0.4
1,072,598	+		AO353_04850	0.23	-0.4
1,072,607	+		AO353_04850	0.24	+0.8
1,072,607	+		AO353_04850	0.24	+0.2
1,072,607	+		AO353_04850	0.24	-0.4
1,072,607	+		AO353_04850	0.24	+0.5
1,072,607	+		AO353_04850	0.24	-0.3
1,072,608	-		AO353_04850	0.24	-0.2
1,072,608	-		AO353_04850	0.24	+0.5
1,072,608	-		AO353_04850	0.24	+0.2
1,072,608	-		AO353_04850	0.24	-1.1
1,072,608	-		AO353_04850	0.24	-0.9
1,072,608	-		AO353_04850	0.24	-1.0
1,072,608	-		AO353_04850	0.24	-0.5
1,072,608	-		AO353_04850	0.24	+0.5
1,072,608	-		AO353_04850	0.24	+2.0
1,072,619	+		AO353_04850	0.26	-0.7
1,072,619	+		AO353_04850	0.26	+0.7
1,072,619	+		AO353_04850	0.26	-0.9
1,072,619	+		AO353_04850	0.26	-2.3
1,072,620	-		AO353_04850	0.26	+0.5
1,072,797	+		AO353_04850	0.44	+0.0
1,072,797	+		AO353_04850	0.44	-1.9
1,072,797	+		AO353_04850	0.44	+1.5
1,072,797	+		AO353_04850	0.44	-0.5
1,072,797	+		AO353_04850	0.44	-0.1
1,072,797	+		AO353_04850	0.44	+0.7
1,072,797	+		AO353_04850	0.44	-1.5
1,072,797	+		AO353_04850	0.44	+0.5
1,072,797	+		AO353_04850	0.44	-1.5
1,072,798	-		AO353_04850	0.44	-1.0
1,072,798	-		AO353_04850	0.44	-1.9
1,072,798	-		AO353_04850	0.44	+0.9
1,072,798	-		AO353_04850	0.44	-0.2
1,072,798	-		AO353_04850	0.44	-2.3
1,072,798	-		AO353_04850	0.44	-0.7
1,072,798	-		AO353_04850	0.44	-1.9
1,072,798	-		AO353_04850	0.44	-0.5
1,072,798	-		AO353_04850	0.44	+0.8
1,072,798	-		AO353_04850	0.44	-1.1
1,072,798	-		AO353_04850	0.44	-1.7
1,072,798	-		AO353_04850	0.44	-0.3
1,072,798	-		AO353_04850	0.44	+0.1
1,072,889	+		AO353_04850	0.53	+0.4
1,073,071	+		AO353_04850	0.72	-0.3
1,073,071	+		AO353_04850	0.72	+0.4
1,073,071	+		AO353_04850	0.72	+0.7
1,073,071	+		AO353_04850	0.72	-2.0
1,073,072	-		AO353_04850	0.72	-0.5
1,073,072	-		AO353_04850	0.72	-1.3
1,073,072	-		AO353_04850	0.72	-0.9
1,073,072	-		AO353_04850	0.72	-1.5
1,073,156	+		AO353_04850	0.81	+0.5
1,073,156	+		AO353_04850	0.81	-1.5
1,073,157	-		AO353_04850	0.81	-0.9
1,073,157	-		AO353_04850	0.81	-0.7
1,073,345	+				-0.9
1,073,345	+				+0.6
1,073,345	+				+0.1
1,073,346	-				-0.1
1,073,346	-				+0.0
1,073,426	+				-0.5
1,073,426	+				+0.5
1,073,426	+				-0.6
1,073,427	-				-0.3
1,073,427	-				+0.3
1,073,462	+		AO353_04855	0.14	+0.3
1,073,462	+		AO353_04855	0.14	-2.1
1,073,462	+		AO353_04855	0.14	-0.1
1,073,462	+		AO353_04855	0.14	-0.8
1,073,463	-		AO353_04855	0.14	-0.3
1,073,463	-		AO353_04855	0.14	+0.5
1,073,463	-		AO353_04855	0.14	-1.1
1,073,463	-		AO353_04855	0.14	-0.1
1,073,463	-		AO353_04855	0.14	-0.1
1,073,463	-		AO353_04855	0.14	-0.2
1,073,463	-		AO353_04855	0.14	+0.2
1,073,463	-		AO353_04855	0.14	+1.2
1,073,547	+		AO353_04855	0.36	-0.3
1,073,547	+		AO353_04855	0.36	-0.7
1,073,548	-		AO353_04855	0.36	-1.2
1,073,562	-		AO353_04855	0.39	+0.7
1,073,595	-		AO353_04855	0.48	-2.2
1,073,707	-		AO353_04855	0.76	-2.4
1,073,738	+		AO353_04855	0.84	-0.1
1,073,752	+		AO353_04855	0.88	+0.2
1,073,794	-				+0.5
1,073,875	+				+0.8
1,073,876	-				+0.6
1,073,893	+				-0.5
1,073,893	+				-1.4
1,073,932	-				-0.5
1,073,935	+				+0.5
1,073,991	-				-0.0
1,074,041	-				-0.0
1,074,052	+				+1.5
1,074,053	-				-0.9
1,074,087	-				-0.4
1,074,104	-		AO353_04860	0.11	-0.2
1,074,133	+		AO353_04860	0.17	-0.8
1,074,134	-		AO353_04860	0.17	-0.4
1,074,146	-		AO353_04860	0.19	+2.3
1,074,153	+		AO353_04860	0.21	+0.4
1,074,153	+		AO353_04860	0.21	+0.9
1,074,153	+		AO353_04860	0.21	+0.9
1,074,154	-		AO353_04860	0.21	+0.5
1,074,154	-		AO353_04860	0.21	-0.5
1,074,165	+		AO353_04860	0.23	+0.1
1,074,166	-		AO353_04860	0.23	-0.5
1,074,182	+		AO353_04860	0.26	-0.9
1,074,182	+		AO353_04860	0.26	-0.1
1,074,183	-		AO353_04860	0.26	+1.9
1,074,183	-		AO353_04860	0.26	-0.3
1,074,183	-		AO353_04860	0.26	+1.5
1,074,220	+		AO353_04860	0.34	+1.2
1,074,220	+		AO353_04860	0.34	+0.1
1,074,221	-		AO353_04860	0.34	-0.5
1,074,221	-		AO353_04860	0.34	-0.0
1,074,221	-		AO353_04860	0.34	-0.5
1,074,257	+		AO353_04860	0.41	+0.0
1,074,257	+		AO353_04860	0.41	+1.1
1,074,257	+		AO353_04860	0.41	-1.2
1,074,257	+		AO353_04860	0.41	-0.5
1,074,257	+		AO353_04860	0.41	+0.9
1,074,257	+		AO353_04860	0.41	+0.3
1,074,257	+		AO353_04860	0.41	-1.1
1,074,258	-		AO353_04860	0.41	+0.4
1,074,258	-		AO353_04860	0.41	-0.3
1,074,258	-		AO353_04860	0.41	+0.2
1,074,258	-		AO353_04860	0.41	+0.1
1,074,265	-		AO353_04860	0.43	-1.6
1,074,265	-		AO353_04860	0.43	+0.9
1,074,265	-		AO353_04860	0.43	-0.4
1,074,294	+		AO353_04860	0.48	-0.6
1,074,295	-		AO353_04860	0.48	+1.4
1,074,310	+		AO353_04860	0.51	+0.5
1,074,310	+		AO353_04860	0.51	+1.7
1,074,331	-		AO353_04860	0.55	-0.4
1,074,331	-		AO353_04860	0.55	-0.2