Experiment: Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02665 and AO353_02670 are separated by 232 nucleotides AO353_02670 and AO353_02675 are separated by 35 nucleotides
AO353_02665: AO353_02665 - DnaA regulatory inactivator Hda, at 566,594 to 567,298
_02665
AO353_02670: AO353_02670 - hypothetical protein, at 567,531 to 568,601
_02670
AO353_02675: AO353_02675 - hypothetical protein, at 568,637 to 569,773
_02675
Position (kb) 567
568
569 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 566.595 kb on + strand at 566.595 kb on + strand at 566.595 kb on + strand at 566.596 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.452 kb on + strand at 567.452 kb on + strand at 567.452 kb on + strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.474 kb on + strand at 567.475 kb on - strand at 567.475 kb on - strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.573 kb on - strand at 567.574 kb on + strand at 567.576 kb on + strand at 567.577 kb on - strand at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.944 kb on - strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.030 kb on - strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.103 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.419 kb on + strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.497 kb on + strand at 568.498 kb on - strand at 568.498 kb on - strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.521 kb on - strand at 568.521 kb on - strand at 568.521 kb on - strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.541 kb on - strand at 568.541 kb on - strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.638 kb on + strand at 568.806 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.118 kb on + strand, within AO353_02675
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 1 mg/ml remove 566,595 + -1.4 566,595 + -0.4 566,595 + -1.6 566,596 - -0.4 567,357 - +1.4 567,357 - +0.7 567,357 - -0.9 567,452 + -1.4 567,452 + +0.6 567,452 + -0.7 567,453 - +0.8 567,453 - +1.1 567,453 - +0.4 567,453 - -0.6 567,453 - -0.9 567,453 - -0.6 567,453 - -0.3 567,453 - -0.2 567,453 - -1.3 567,474 + -1.2 567,475 - +0.0 567,475 - -1.1 567,556 + -3.5 567,556 + -1.4 567,556 + -0.6 567,556 + -0.9 567,557 - +1.0 567,557 - +1.1 567,557 - -0.4 567,557 - -1.0 567,557 - -0.0 567,573 - +0.6 567,574 + -2.1 567,576 + -0.4 567,577 - +0.4 567,862 + AO353_02670 0.31 -1.7 567,862 + AO353_02670 0.31 -0.3 567,862 + AO353_02670 0.31 +0.7 567,862 + AO353_02670 0.31 -0.3 567,862 + AO353_02670 0.31 +0.8 567,863 - AO353_02670 0.31 -0.2 567,863 - AO353_02670 0.31 +0.2 567,863 - AO353_02670 0.31 -1.7 567,863 - AO353_02670 0.31 -0.7 567,943 + AO353_02670 0.38 -2.4 567,943 + AO353_02670 0.38 -0.9 567,944 - AO353_02670 0.39 -0.1 568,029 + AO353_02670 0.46 -1.2 568,029 + AO353_02670 0.46 -2.2 568,030 - AO353_02670 0.47 -0.5 568,102 + AO353_02670 0.53 -1.1 568,102 + AO353_02670 0.53 -0.3 568,103 - AO353_02670 0.53 -0.2 568,273 - AO353_02670 0.69 -1.9 568,273 - AO353_02670 0.69 +0.9 568,273 - AO353_02670 0.69 -1.2 568,273 - AO353_02670 0.69 -1.0 568,339 + AO353_02670 0.75 +1.1 568,339 + AO353_02670 0.75 +1.2 568,339 + AO353_02670 0.75 -1.6 568,339 + AO353_02670 0.75 -0.4 568,339 + AO353_02670 0.75 +0.4 568,340 - AO353_02670 0.76 -0.1 568,340 - AO353_02670 0.76 -0.2 568,340 - AO353_02670 0.76 -0.2 568,340 - AO353_02670 0.76 -1.0 568,419 + AO353_02670 0.83 +0.5 568,490 - AO353_02670 0.90 -0.8 568,490 - AO353_02670 0.90 -0.4 568,490 - AO353_02670 0.90 -1.2 568,490 - AO353_02670 0.90 -0.0 568,497 + -1.1 568,498 - +0.6 568,498 - -0.7 568,520 + +1.4 568,520 + -0.8 568,520 + +0.6 568,520 + -1.2 568,520 + +0.4 568,520 + +0.6 568,520 + +0.1 568,521 - -0.6 568,521 - -1.2 568,521 - +1.4 568,540 + -1.2 568,540 + -1.2 568,540 + +1.8 568,540 + -0.6 568,540 + +0.4 568,540 + -0.2 568,540 + -0.0 568,541 - -0.6 568,541 - +0.7 568,618 + +0.2 568,618 + +0.4 568,618 + -0.6 568,618 + +0.7 568,618 + +1.4 568,618 + +0.8 568,618 + -1.3 568,618 + -1.2 568,619 - +0.2 568,619 - +0.1 568,619 - +0.8 568,619 - -0.2 568,619 - +0.5 568,619 - -0.3 568,619 - +0.4 568,619 - +0.0 568,619 - -1.4 568,619 - -0.6 568,620 + -0.3 568,620 + +0.2 568,620 + -1.4 568,620 + +1.1 568,620 + +0.0 568,620 + -2.1 568,620 + -1.2 568,620 + +1.3 568,621 - +0.4 568,621 - -0.5 568,621 - +1.2 568,621 - +0.8 568,621 - +1.0 568,621 - +0.0 568,621 - -1.1 568,621 - -0.2 568,621 - +1.1 568,622 + -2.1 568,622 + -0.9 568,622 + +0.3 568,622 + -0.0 568,622 + -0.9 568,622 + -0.2 568,622 + +0.8 568,622 + -1.2 568,622 + -0.7 568,622 + +1.4 568,622 + -1.8 568,623 - -0.3 568,623 - +0.2 568,623 - -0.7 568,623 - -0.9 568,623 - -0.7 568,623 - -1.6 568,623 - +0.1 568,623 - +1.8 568,623 - -0.2 568,623 - -0.9 568,623 - +0.6 568,623 - -0.7 568,638 + +1.3 568,806 + AO353_02675 0.15 -0.8 569,048 + AO353_02675 0.36 -0.4 569,048 + AO353_02675 0.36 +0.1 569,048 + AO353_02675 0.36 -0.4 569,048 + AO353_02675 0.36 +0.4 569,048 + AO353_02675 0.36 -0.8 569,048 + AO353_02675 0.36 -1.8 569,048 + AO353_02675 0.36 +0.9 569,048 + AO353_02675 0.36 +0.7 569,048 + AO353_02675 0.36 +0.8 569,048 + AO353_02675 0.36 -2.2 569,048 + AO353_02675 0.36 -2.6 569,048 + AO353_02675 0.36 -1.9 569,048 + AO353_02675 0.36 -0.2 569,048 + AO353_02675 0.36 -2.2 569,048 - AO353_02675 0.36 -0.9 569,049 - AO353_02675 0.36 +1.7 569,049 - AO353_02675 0.36 +0.6 569,049 - AO353_02675 0.36 -0.4 569,049 - AO353_02675 0.36 -0.4 569,049 - AO353_02675 0.36 +1.4 569,049 - AO353_02675 0.36 -0.4 569,049 - AO353_02675 0.36 -0.7 569,049 - AO353_02675 0.36 -1.1 569,049 - AO353_02675 0.36 +0.3 569,049 - AO353_02675 0.36 -0.3 569,118 + AO353_02675 0.42 +0.2
Or see this region's nucleotide sequence