Experiment: Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02650 and AO353_02655 are separated by 15 nucleotides AO353_02655 and AO353_02660 are separated by 165 nucleotides AO353_02660 and AO353_02665 are separated by 213 nucleotides
AO353_02650: AO353_02650 - SAM-dependent methyltransferase, at 564,380 to 565,042
_02650
AO353_02655: AO353_02655 - peptidase P60, at 565,058 to 565,591
_02655
AO353_02660: AO353_02660 - peptidase P60, at 565,757 to 566,380
_02660
AO353_02665: AO353_02665 - DnaA regulatory inactivator Hda, at 566,594 to 567,298
_02665
Position (kb) 565
566
567 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.005 kb on + strand at 565.006 kb on - strand at 565.006 kb on - strand at 565.059 kb on + strand at 565.059 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.111 kb on - strand at 565.111 kb on - strand at 565.125 kb on + strand, within AO353_02655 at 565.126 kb on - strand, within AO353_02655 at 565.126 kb on - strand, within AO353_02655 at 565.157 kb on - strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.265 kb on + strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.333 kb on + strand, within AO353_02655 at 565.333 kb on + strand, within AO353_02655 at 565.357 kb on - strand, within AO353_02655 at 565.357 kb on - strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.397 kb on - strand, within AO353_02655 at 565.413 kb on + strand, within AO353_02655 at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.591 kb on + strand at 565.591 kb on + strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.665 kb on - strand at 565.672 kb on + strand at 565.676 kb on + strand at 565.677 kb on - strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.724 kb on + strand at 565.732 kb on + strand at 565.738 kb on + strand at 565.738 kb on - strand at 565.831 kb on - strand, within AO353_02660 at 565.831 kb on - strand, within AO353_02660 at 565.847 kb on - strand, within AO353_02660 at 565.908 kb on + strand, within AO353_02660 at 565.908 kb on + strand, within AO353_02660 at 565.909 kb on - strand, within AO353_02660 at 566.067 kb on + strand, within AO353_02660 at 566.185 kb on - strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.242 kb on - strand, within AO353_02660 at 566.246 kb on - strand, within AO353_02660 at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.404 kb on + strand at 566.404 kb on + strand at 566.419 kb on + strand at 566.419 kb on + strand at 566.419 kb on + strand at 566.420 kb on - strand at 566.420 kb on - strand at 566.428 kb on + strand at 566.428 kb on + strand at 566.428 kb on + strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.469 kb on + strand at 566.470 kb on - strand at 566.490 kb on + strand at 566.490 kb on + strand at 566.490 kb on + strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.498 kb on + strand at 566.498 kb on + strand at 566.509 kb on + strand at 566.509 kb on + strand at 566.509 kb on + strand at 566.595 kb on + strand at 566.595 kb on + strand at 566.595 kb on + strand at 566.596 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 1 mg/ml remove 564,999 + -1.4 564,999 + -0.5 564,999 + +0.0 564,999 + +1.0 564,999 + -1.2 565,000 - -0.7 565,000 - +1.5 565,000 - -0.2 565,000 - -0.2 565,000 - -0.2 565,000 - -0.6 565,003 + +0.3 565,003 + -1.1 565,003 + +1.9 565,003 + +0.4 565,003 + -0.4 565,003 + -0.8 565,003 + -1.6 565,003 + -0.2 565,003 + +0.8 565,003 + +0.8 565,003 + +0.2 565,003 + -2.3 565,004 - +0.7 565,004 - -0.4 565,004 - -0.6 565,004 - -1.8 565,004 - -1.5 565,004 - +0.2 565,005 + -0.9 565,006 - -0.2 565,006 - -1.4 565,059 + +1.9 565,059 + +0.5 565,110 + +0.6 565,110 + -1.0 565,110 + +0.8 565,110 + -1.4 565,111 - +0.6 565,111 - -1.6 565,125 + AO353_02655 0.13 -0.5 565,126 - AO353_02655 0.13 -0.6 565,126 - AO353_02655 0.13 -2.1 565,157 - AO353_02655 0.19 -0.1 565,200 + AO353_02655 0.27 +0.1 565,200 + AO353_02655 0.27 +0.4 565,200 + AO353_02655 0.27 +0.8 565,200 + AO353_02655 0.27 -0.6 565,200 + AO353_02655 0.27 -2.7 565,200 + AO353_02655 0.27 +0.5 565,201 - AO353_02655 0.27 +0.8 565,201 - AO353_02655 0.27 -0.8 565,201 - AO353_02655 0.27 +0.1 565,201 - AO353_02655 0.27 -0.2 565,201 - AO353_02655 0.27 -0.9 565,265 + AO353_02655 0.39 -0.8 565,266 - AO353_02655 0.39 +0.1 565,266 - AO353_02655 0.39 -0.7 565,266 - AO353_02655 0.39 +0.2 565,333 + AO353_02655 0.51 +0.7 565,333 + AO353_02655 0.51 -1.2 565,357 - AO353_02655 0.56 -0.7 565,357 - AO353_02655 0.56 -0.2 565,396 + AO353_02655 0.63 -0.7 565,396 + AO353_02655 0.63 -1.3 565,396 + AO353_02655 0.63 +1.1 565,396 + AO353_02655 0.63 +0.4 565,396 + AO353_02655 0.63 +0.1 565,397 - AO353_02655 0.63 -0.4 565,413 + AO353_02655 0.66 -1.6 565,568 + +1.4 565,568 + +0.4 565,568 + +1.8 565,568 + -1.9 565,568 + +0.1 565,568 + -1.2 565,568 + -0.2 565,568 + +0.9 565,569 - +0.8 565,569 - +0.7 565,569 - -0.2 565,569 - -1.2 565,569 - -0.0 565,569 - -1.3 565,591 + -1.4 565,591 + +1.3 565,592 - -0.2 565,592 - -0.1 565,592 - -0.3 565,592 - +0.3 565,592 - -0.3 565,592 - -1.2 565,592 - +0.2 565,593 + +0.5 565,593 + -2.0 565,593 + -0.3 565,593 + +0.6 565,593 + +1.0 565,593 + -0.3 565,593 + -2.1 565,593 + +1.4 565,593 + +0.6 565,593 + -0.8 565,593 + +2.0 565,593 + -1.8 565,593 + -1.6 565,593 + -0.8 565,593 + -2.3 565,594 - +1.0 565,594 - -0.9 565,594 - +1.8 565,594 - -1.1 565,594 - -1.4 565,594 - -1.4 565,594 - +0.8 565,594 - -0.9 565,594 - -0.5 565,594 - -0.3 565,594 - -0.2 565,594 - +0.0 565,594 - -0.3 565,665 - +2.6 565,672 + -1.0 565,676 + -2.1 565,677 - +1.2 565,686 + +0.1 565,686 + -1.4 565,686 + +0.1 565,686 + +0.8 565,724 + -1.1 565,732 + +0.1 565,738 + +0.7 565,738 - -0.7 565,831 - AO353_02660 0.12 -2.3 565,831 - AO353_02660 0.12 -1.8 565,847 - AO353_02660 0.14 -1.6 565,908 + AO353_02660 0.24 -0.3 565,908 + AO353_02660 0.24 -2.1 565,909 - AO353_02660 0.24 -2.2 566,067 + AO353_02660 0.50 -2.8 566,185 - AO353_02660 0.69 -3.8 566,241 + AO353_02660 0.78 -1.8 566,241 + AO353_02660 0.78 -0.6 566,241 + AO353_02660 0.78 -2.3 566,241 + AO353_02660 0.78 -2.8 566,242 - AO353_02660 0.78 -1.5 566,246 - AO353_02660 0.78 -2.7 566,375 + +0.4 566,375 + -2.5 566,375 + -1.5 566,375 + -2.6 566,375 + +0.4 566,375 + -2.1 566,376 - -0.6 566,376 - -2.8 566,376 - -3.1 566,376 - -1.4 566,404 + -2.1 566,404 + -0.6 566,419 + -1.3 566,419 + -1.6 566,419 + -1.8 566,420 - -1.4 566,420 - +0.4 566,428 + -1.7 566,428 + -1.2 566,428 + -3.4 566,429 - -0.2 566,429 - -1.8 566,429 - -0.1 566,429 - +0.4 566,469 + -1.2 566,470 - -0.5 566,490 + -0.0 566,490 + -1.9 566,490 + +0.1 566,491 - -0.1 566,491 - +0.5 566,491 - +2.1 566,491 - +1.6 566,491 - -1.8 566,498 + -1.2 566,498 + -1.0 566,509 + -2.6 566,509 + -0.6 566,509 + -0.3 566,595 + -1.4 566,595 + -0.4 566,595 + -1.6 566,596 - -0.4 567,357 - +1.4 567,357 - +0.7 567,357 - -0.9
Or see this region's nucleotide sequence