Strain Fitness in Shewanella loihica PV-4 around Shew_3168
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,770,642 | - | Shew_3167 | 0.13 | +0.6 | |
3,770,829 | - | Shew_3167 | 0.89 | -0.3 | |
3,770,864 | - | -0.1 | |||
3,770,950 | + | -0.2 | |||
3,770,958 | - | +0.1 | |||
3,771,025 | - | +0.6 | |||
3,771,246 | - | +0.1 | |||
3,771,246 | + | -2.1 | |||
3,771,752 | - | Shew_3168 | 0.53 | +0.3 | |
3,771,752 | - | Shew_3168 | 0.53 | -0.5 | |
3,771,872 | - | Shew_3168 | 0.70 | -0.2 | |
3,772,154 | - | +0.2 | |||
3,772,188 | + | +0.2 | |||
3,772,188 | - | +0.5 | |||
3,772,269 | + | +0.1 | |||
3,772,342 | + | +0.2 |
Or see this region's nucleotide sequence