Strain Fitness in Shewanella loihica PV-4 around Shew_3163

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,766,045	+		Shew_3162	0.86	-0.4
3,766,071	-		Shew_3162	0.86	+0.2
3,766,139	-		Shew_3162	0.88	-0.1
3,766,173	+		Shew_3162	0.89	+0.4
3,766,181	-		Shew_3162	0.89	+0.0
3,766,472	+				+1.0
3,766,478	+				+0.4
3,766,635	+				-0.2
3,766,883	-				+1.1
3,767,222	-		Shew_3163	0.38	-1.4
3,767,369	-		Shew_3163	0.51	-1.0
3,767,375	+		Shew_3163	0.52	+0.4
3,767,696	-		Shew_3163	0.82	-0.6
3,767,875	+				+0.0
3,768,278	+		Shew_3164	0.46	-2.4
3,768,335	+		Shew_3164	0.53	-0.6
3,768,595	-		Shew_3164	0.89	-0.4
3,768,806	+		Shew_3165	0.21	-1.5