Strain Fitness in Shewanella loihica PV-4 around Shew_2363
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,762,975 | + | +0.1 | |||
2,763,012 | + | -0.0 | |||
2,763,198 | - | Shew_2362 | 0.22 | +0.2 | |
2,763,643 | + | Shew_2362 | 0.71 | -0.1 | |
2,763,643 | + | Shew_2362 | 0.71 | -0.3 | |
2,763,723 | + | Shew_2362 | 0.80 | -0.2 | |
2,764,270 | + | Shew_2363 | 0.34 | -0.3 | |
2,764,409 | - | Shew_2363 | 0.48 | -0.8 | |
2,764,473 | + | Shew_2363 | 0.54 | -0.9 | |
2,764,547 | + | Shew_2363 | 0.62 | -1.0 | |
2,764,555 | - | Shew_2363 | 0.62 | -0.1 | |
2,764,894 | - | -0.2 | |||
2,765,047 | - | -0.2 | |||
2,765,199 | + | Shew_2364 | 0.15 | +0.3 | |
2,765,630 | - | Shew_2364 | 0.43 | -0.1 | |
2,765,868 | + | Shew_2364 | 0.58 | -0.1 | |
2,765,871 | - | Shew_2364 | 0.58 | -0.2 |
Or see this region's nucleotide sequence