Strain Fitness in Shewanella loihica PV-4 around Shew_1675
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,923,385 | - | fabG | Shew_1673 | 0.57 | -0.4 |
1,923,400 | - | fabG | Shew_1673 | 0.59 | -1.0 |
1,924,267 | - | +0.2 | |||
1,924,585 | - | Shew_1675 | 0.24 | -0.2 | |
1,925,329 | + | Shew_1675 | 0.60 | -0.3 | |
1,925,337 | - | Shew_1675 | 0.61 | -1.0 | |
1,925,469 | + | Shew_1675 | 0.67 | -0.2 | |
1,925,821 | - | Shew_1675 | 0.84 | +0.2 | |
1,926,011 | + | +0.1 | |||
1,926,144 | - | -0.3 | |||
1,927,041 | - | Shew_1676 | 0.43 | +0.4 |
Or see this region's nucleotide sequence