Strain Fitness in Shewanella loihica PV-4 around Shew_0070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
82,853	-		Shew_0069	0.41	+0.0
82,881	-		Shew_0069	0.44	+0.3
83,228	+		Shew_0069	0.75	-0.7
83,235	-		Shew_0069	0.76	-0.2
83,235	-		Shew_0069	0.76	-0.0
83,309	-		Shew_0069	0.82	-0.3
83,438	-				+0.1
83,453	+				+0.0
83,749	+				+0.1
83,931	-		Shew_0070	0.21	-0.1
83,946	+		Shew_0070	0.23	-1.4
83,972	-		Shew_0070	0.25	-0.1
84,106	+		Shew_0070	0.36	+0.7
84,204	+		Shew_0070	0.45	-0.5
84,270	-		Shew_0070	0.51	+0.2
84,282	-		Shew_0070	0.52	-0.1
84,519	-		Shew_0070	0.72	+0.3
84,540	-		Shew_0070	0.74	+0.1
84,624	-		Shew_0070	0.81	-0.3
84,688	+		Shew_0070	0.86	+0.3
84,742	-				+0.9
84,795	-				-0.0
84,933	-				-0.4
85,084	+				+1.1
85,118	-				+0.2
85,120	+				-0.6
85,259	+		Shew_0071	0.24	-0.3
85,267	-		Shew_0071	0.25	-0.2
85,286	+		Shew_0071	0.27	-0.1
85,385	+		Shew_0071	0.39	+0.3
85,398	-		Shew_0071	0.40	-0.3
85,460	+		Shew_0071	0.47	-1.3
85,562	+		Shew_0071	0.59	-0.1
85,570	-		Shew_0071	0.60	+0.2
85,570	-		Shew_0071	0.60	-2.0
85,585	-		Shew_0071	0.62	+0.0
85,660	+		Shew_0071	0.70	+0.4
85,696	-		Shew_0071	0.75	-0.4
85,720	+		Shew_0071	0.77	-2.1
85,728	-		Shew_0071	0.78	+1.2
85,801	+		Shew_0071	0.87	-0.2