Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2608

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,063,480	+		Pf6N2E2_2607	0.12	+1.5
3,063,515	+		Pf6N2E2_2607	0.16	-1.7
3,063,516	-		Pf6N2E2_2607	0.16	+0.9
3,063,516	-		Pf6N2E2_2607	0.16	-0.5
3,063,531	-		Pf6N2E2_2607	0.17	-0.6
3,063,566	+		Pf6N2E2_2607	0.21	+1.6
3,063,566	+		Pf6N2E2_2607	0.21	+0.6
3,063,567	-		Pf6N2E2_2607	0.21	-0.3
3,063,778	+		Pf6N2E2_2607	0.41	-2.5
3,063,778	+		Pf6N2E2_2607	0.41	+0.2
3,063,778	+		Pf6N2E2_2607	0.41	+0.6
3,063,779	-		Pf6N2E2_2607	0.41	+0.5
3,063,798	+		Pf6N2E2_2607	0.43	+0.2
3,063,798	+		Pf6N2E2_2607	0.43	+1.4
3,063,799	-		Pf6N2E2_2607	0.43	-1.9
3,063,833	+		Pf6N2E2_2607	0.46	-1.0
3,063,834	-		Pf6N2E2_2607	0.46	+0.4
3,063,837	+		Pf6N2E2_2607	0.46	-0.9
3,063,837	+		Pf6N2E2_2607	0.46	+1.0
3,063,837	+		Pf6N2E2_2607	0.46	-0.8
3,063,838	-		Pf6N2E2_2607	0.46	-2.0
3,063,838	-		Pf6N2E2_2607	0.46	-0.7
3,063,838	-		Pf6N2E2_2607	0.46	-0.9
3,063,838	-		Pf6N2E2_2607	0.46	+0.6
3,063,838	-		Pf6N2E2_2607	0.46	-0.3
3,063,838	-		Pf6N2E2_2607	0.46	-3.3
3,063,838	-		Pf6N2E2_2607	0.46	-0.3
3,063,857	-		Pf6N2E2_2607	0.48	-0.1
3,063,937	-		Pf6N2E2_2607	0.56	+0.6
3,063,937	-		Pf6N2E2_2607	0.56	+0.1
3,063,937	-		Pf6N2E2_2607	0.56	+0.0
3,063,979	+		Pf6N2E2_2607	0.60	+0.9
3,063,979	+		Pf6N2E2_2607	0.60	+0.5
3,063,979	+		Pf6N2E2_2607	0.60	-0.6
3,064,010	+		Pf6N2E2_2607	0.63	+0.0
3,064,010	+		Pf6N2E2_2607	0.63	+1.0
3,064,146	-		Pf6N2E2_2607	0.76	-0.1
3,064,146	-		Pf6N2E2_2607	0.76	+1.1
3,064,155	-		Pf6N2E2_2607	0.77	-1.2
3,064,241	+		Pf6N2E2_2607	0.85	+0.2
3,064,241	+		Pf6N2E2_2607	0.85	-0.3
3,064,241	+		Pf6N2E2_2607	0.85	+0.2
3,064,241	+		Pf6N2E2_2607	0.85	-0.4
3,064,242	-		Pf6N2E2_2607	0.85	-0.7
3,064,242	-		Pf6N2E2_2607	0.85	+0.2
3,064,242	-		Pf6N2E2_2607	0.85	-2.8
3,064,395	+				+0.8
3,064,396	-				-2.2
3,064,396	-				+0.6
3,064,447	+				-1.5
3,064,462	+				+0.1
3,064,496	+				-2.6
3,064,497	-				-1.2
3,064,517	+				-0.4
3,064,517	+				+0.7
3,064,517	+				+1.5
3,064,518	-				-1.3
3,064,518	-				-0.3
3,064,518	-				+0.8
3,064,605	+		Pf6N2E2_2608	0.14	-0.7
3,064,605	+		Pf6N2E2_2608	0.14	-0.2
3,064,606	-		Pf6N2E2_2608	0.14	+0.2
3,064,649	+		Pf6N2E2_2608	0.17	+0.6
3,064,756	+		Pf6N2E2_2608	0.24	-0.5
3,064,756	+		Pf6N2E2_2608	0.24	+0.2
3,064,756	+		Pf6N2E2_2608	0.24	+1.0
3,064,756	+		Pf6N2E2_2608	0.24	-0.1
3,064,757	-		Pf6N2E2_2608	0.24	+1.1
3,064,757	-		Pf6N2E2_2608	0.24	+0.8
3,064,757	-		Pf6N2E2_2608	0.24	+1.1
3,064,757	-		Pf6N2E2_2608	0.24	-0.1
3,064,757	-		Pf6N2E2_2608	0.24	-1.8
3,064,757	-		Pf6N2E2_2608	0.24	+0.2
3,064,776	-		Pf6N2E2_2608	0.26	-1.1
3,064,844	+		Pf6N2E2_2608	0.30	+0.8
3,065,000	+		Pf6N2E2_2608	0.40	-0.2
3,065,001	-		Pf6N2E2_2608	0.41	-0.2
3,065,001	-		Pf6N2E2_2608	0.41	+1.5
3,065,001	-		Pf6N2E2_2608	0.41	-0.7
3,065,001	-		Pf6N2E2_2608	0.41	+0.5
3,065,001	-		Pf6N2E2_2608	0.41	+1.9
3,065,001	-		Pf6N2E2_2608	0.41	-0.6
3,065,005	-		Pf6N2E2_2608	0.41	-1.7
3,065,038	+		Pf6N2E2_2608	0.43	-0.3
3,065,039	-		Pf6N2E2_2608	0.43	-2.8
3,065,053	+		Pf6N2E2_2608	0.44	-1.3
3,065,210	+		Pf6N2E2_2608	0.55	-2.5
3,065,505	+		Pf6N2E2_2608	0.74	-0.1
3,065,505	+		Pf6N2E2_2608	0.74	+0.5
3,065,506	-		Pf6N2E2_2608	0.74	-1.4
3,065,506	-		Pf6N2E2_2608	0.74	-0.2
3,065,509	+		Pf6N2E2_2608	0.74	+0.2
3,065,509	+		Pf6N2E2_2608	0.74	-1.2
3,065,510	-		Pf6N2E2_2608	0.75	-0.3
3,065,634	-		Pf6N2E2_2608	0.83	+0.3
3,065,759	+				-3.0
3,065,759	+				-1.5
3,065,759	+				+1.1
3,065,759	+				+0.5
3,065,760	-				-1.1
3,065,978	-		Pf6N2E2_2609	0.12	+0.1
3,066,062	+		Pf6N2E2_2609	0.24	-1.0
3,066,063	-		Pf6N2E2_2609	0.24	-0.8
3,066,063	-		Pf6N2E2_2609	0.24	+0.7
3,066,063	-		Pf6N2E2_2609	0.24	-2.7
3,066,128	+		Pf6N2E2_2609	0.33	-1.4
3,066,128	+		Pf6N2E2_2609	0.33	-0.6
3,066,175	+		Pf6N2E2_2609	0.40	-0.2
3,066,176	-		Pf6N2E2_2609	0.40	-1.1
3,066,176	-		Pf6N2E2_2609	0.40	+0.1
3,066,287	+		Pf6N2E2_2609	0.56	+0.0
3,066,288	-		Pf6N2E2_2609	0.56	+0.4
3,066,288	-		Pf6N2E2_2609	0.56	-0.6
3,066,291	+		Pf6N2E2_2609	0.56	-0.3
3,066,291	+		Pf6N2E2_2609	0.56	-1.4
3,066,291	+		Pf6N2E2_2609	0.56	-0.8
3,066,292	-		Pf6N2E2_2609	0.56	-1.1
3,066,292	-		Pf6N2E2_2609	0.56	+1.1
3,066,292	-		Pf6N2E2_2609	0.56	+2.0
3,066,292	-		Pf6N2E2_2609	0.56	-1.9
3,066,292	-		Pf6N2E2_2609	0.56	-0.9
3,066,292	-		Pf6N2E2_2609	0.56	-1.4
3,066,292	-		Pf6N2E2_2609	0.56	-1.4
3,066,292	-		Pf6N2E2_2609	0.56	-0.8
3,066,292	-		Pf6N2E2_2609	0.56	+1.2
3,066,292	-		Pf6N2E2_2609	0.56	-0.7
3,066,292	-		Pf6N2E2_2609	0.56	+0.8
3,066,292	-		Pf6N2E2_2609	0.56	-1.4
3,066,292	-		Pf6N2E2_2609	0.56	+0.0
3,066,450	+		Pf6N2E2_2609	0.79	+0.6
3,066,451	-		Pf6N2E2_2609	0.79	-0.2
3,066,451	-		Pf6N2E2_2609	0.79	-0.1
3,066,451	-		Pf6N2E2_2609	0.79	+0.4
3,066,451	-		Pf6N2E2_2609	0.79	+0.9
3,066,451	-		Pf6N2E2_2609	0.79	-1.2
3,066,460	+		Pf6N2E2_2609	0.80	-0.2
3,066,460	+		Pf6N2E2_2609	0.80	-0.8
3,066,460	+		Pf6N2E2_2609	0.80	-0.7
3,066,460	+		Pf6N2E2_2609	0.80	+0.0
3,066,461	-		Pf6N2E2_2609	0.80	-1.4
3,066,461	-		Pf6N2E2_2609	0.80	+0.6
3,066,637	+				-2.9
3,066,637	+				-0.9
3,066,637	+				-0.8
3,066,637	+				+0.5
3,066,637	+				-3.0
3,066,637	+				-0.6
3,066,637	+				-0.8
3,066,637	+				-2.0
3,066,637	+				-1.7
3,066,637	+				-0.7
3,066,637	+				-1.2
3,066,638	-				-0.5
3,066,638	-				+2.1
3,066,638	-				-2.5
3,066,638	-				-0.2
3,066,638	-				-0.5
3,066,694	+				-0.3
3,066,694	+				+1.0
3,066,694	+				-0.6
3,066,698	-				-2.3
3,066,746	-		Pf6N2E2_2610	0.13	-1.1
3,066,748	+		Pf6N2E2_2610	0.13	-2.6
3,066,749	-		Pf6N2E2_2610	0.13	-1.3
3,066,749	-		Pf6N2E2_2610	0.13	+0.4
3,066,772	+		Pf6N2E2_2610	0.15	+0.1
3,066,772	+		Pf6N2E2_2610	0.15	+0.1
3,066,772	+		Pf6N2E2_2610	0.15	+0.7
3,066,772	+		Pf6N2E2_2610	0.15	-0.5
3,066,772	+		Pf6N2E2_2610	0.15	-0.3
3,066,772	+		Pf6N2E2_2610	0.15	-0.2
3,066,772	+		Pf6N2E2_2610	0.15	-0.2
3,066,773	-		Pf6N2E2_2610	0.15	-0.7
3,066,773	-		Pf6N2E2_2610	0.15	+0.5
3,066,773	-		Pf6N2E2_2610	0.15	-0.2
3,066,773	-		Pf6N2E2_2610	0.15	-1.5
3,066,773	-		Pf6N2E2_2610	0.15	-0.5
3,066,773	-		Pf6N2E2_2610	0.15	+0.1
3,066,773	-		Pf6N2E2_2610	0.15	-1.3
3,066,773	-		Pf6N2E2_2610	0.15	+0.1
3,066,773	-		Pf6N2E2_2610	0.15	-1.4
3,066,773	-		Pf6N2E2_2610	0.15	-1.5
3,066,773	-		Pf6N2E2_2610	0.15	+0.1
3,066,773	-		Pf6N2E2_2610	0.15	-0.8
3,066,865	+		Pf6N2E2_2610	0.23	-0.4
3,066,865	+		Pf6N2E2_2610	0.23	+0.9
3,066,865	+		Pf6N2E2_2610	0.23	+1.6
3,066,865	+		Pf6N2E2_2610	0.23	-1.9
3,066,865	+		Pf6N2E2_2610	0.23	+0.0
3,066,866	-		Pf6N2E2_2610	0.23	-2.2
3,066,866	-		Pf6N2E2_2610	0.23	-0.3
3,066,866	-		Pf6N2E2_2610	0.23	+1.1
3,066,866	-		Pf6N2E2_2610	0.23	-2.3
3,066,866	-		Pf6N2E2_2610	0.23	-1.5
3,066,866	-		Pf6N2E2_2610	0.23	+0.8
3,066,866	-		Pf6N2E2_2610	0.23	+1.1
3,066,866	-		Pf6N2E2_2610	0.23	-0.3
3,066,866	-		Pf6N2E2_2610	0.23	-0.9