Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3401

Experiment: Nickel (II) chloride 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1.5 mM
3,530,617	+		Ga0059261_3400	0.31	-0.5
3,530,617	+		Ga0059261_3400	0.31	+0.7
3,530,617	+		Ga0059261_3400	0.31	+0.0
3,530,618	-		Ga0059261_3400	0.31	+0.7
3,530,618	-		Ga0059261_3400	0.31	+0.6
3,530,618	-		Ga0059261_3400	0.31	+0.7
3,530,731	+		Ga0059261_3400	0.41	+0.3
3,530,731	+		Ga0059261_3400	0.41	+0.5
3,530,731	+		Ga0059261_3400	0.41	+0.6
3,530,732	-		Ga0059261_3400	0.41	+1.1
3,530,732	-		Ga0059261_3400	0.41	-0.4
3,530,732	-		Ga0059261_3400	0.41	+0.6
3,530,732	-		Ga0059261_3400	0.41	+0.3
3,530,732	-		Ga0059261_3400	0.41	+0.6
3,530,732	-		Ga0059261_3400	0.41	+1.6
3,530,732	-		Ga0059261_3400	0.41	-0.4
3,530,759	+				-0.2
3,530,759	+		Ga0059261_3400	0.43	+0.6
3,530,759	+		Ga0059261_3400	0.43	+1.3
3,530,759	+		Ga0059261_3400	0.43	+1.9
3,530,759	+		Ga0059261_3400	0.43	-0.5
3,530,759	+		Ga0059261_3400	0.43	+0.1
3,530,760	-		Ga0059261_3400	0.43	+1.4
3,530,760	-		Ga0059261_3400	0.43	+0.5
3,530,760	-		Ga0059261_3400	0.43	-0.1
3,530,760	-		Ga0059261_3400	0.43	+0.8
3,530,760	-		Ga0059261_3400	0.43	+1.4
3,530,760	-		Ga0059261_3400	0.43	-0.2
3,530,760	-		Ga0059261_3400	0.43	-0.4
3,530,760	-		Ga0059261_3400	0.43	+0.0
3,531,005	+		Ga0059261_3400	0.63	+0.9
3,531,005	+		Ga0059261_3400	0.63	+1.1
3,531,007	+		Ga0059261_3400	0.63	+0.4
3,531,007	+		Ga0059261_3400	0.63	+0.6
3,531,007	+		Ga0059261_3400	0.63	+0.1
3,531,007	+		Ga0059261_3400	0.63	+0.8
3,531,007	+		Ga0059261_3400	0.63	+1.0
3,531,007	+		Ga0059261_3400	0.63	+0.7
3,531,007	+		Ga0059261_3400	0.63	-0.1
3,531,007	+		Ga0059261_3400	0.63	+0.5
3,531,007	+		Ga0059261_3400	0.63	+1.5
3,531,007	+		Ga0059261_3400	0.63	-0.6
3,531,007	+		Ga0059261_3400	0.63	-0.1
3,531,007	+		Ga0059261_3400	0.63	+0.5
3,531,008	-		Ga0059261_3400	0.63	+0.7
3,531,008	-		Ga0059261_3400	0.63	+0.8
3,531,008	-		Ga0059261_3400	0.63	+0.3
3,531,008	-		Ga0059261_3400	0.63	+1.0
3,531,008	-		Ga0059261_3400	0.63	+0.1
3,531,008	-		Ga0059261_3400	0.63	+0.3
3,531,008	-		Ga0059261_3400	0.63	+1.2
3,531,054	-		Ga0059261_3400	0.67	+0.4
3,531,280	+		Ga0059261_3400	0.86	+0.7
3,531,280	+		Ga0059261_3400	0.86	+0.6
3,531,280	+		Ga0059261_3400	0.86	+0.2
3,531,306	+		Ga0059261_3400	0.88	-0.2
3,531,306	+		Ga0059261_3400	0.88	+1.0
3,531,307	-		Ga0059261_3400	0.88	+0.8
3,531,307	-		Ga0059261_3400	0.88	-0.3
3,531,323	-		Ga0059261_3400	0.89	+1.1
3,531,323	-		Ga0059261_3400	0.89	+0.8
3,531,443	+				+0.4
3,531,561	-		Ga0059261_3401	0.21	-0.2
3,531,684	+		Ga0059261_3401	0.45	+0.7
3,531,684	+		Ga0059261_3401	0.45	+0.2
3,531,684	+		Ga0059261_3401	0.45	+0.4
3,531,684	+		Ga0059261_3401	0.45	+0.2
3,531,684	+		Ga0059261_3401	0.45	+0.7
3,531,684	+		Ga0059261_3401	0.45	+1.4
3,531,692	-		Ga0059261_3401	0.47	-0.5
3,531,781	+		Ga0059261_3401	0.64	+0.8
3,531,781	+		Ga0059261_3401	0.64	+0.6
3,531,781	+		Ga0059261_3401	0.64	+0.5
3,531,781	+		Ga0059261_3401	0.64	-0.1
3,531,782	-		Ga0059261_3401	0.64	+0.2
3,531,782	-		Ga0059261_3401	0.64	+2.8
3,531,782	-		Ga0059261_3401	0.64	+0.5
3,531,783	+		Ga0059261_3401	0.64	+0.5
3,531,783	+		Ga0059261_3401	0.64	+0.2
3,531,783	+		Ga0059261_3401	0.64	+0.5
3,531,783	+		Ga0059261_3401	0.64	+0.7
3,531,783	+		Ga0059261_3401	0.64	+1.1
3,531,783	+		Ga0059261_3401	0.64	+1.0
3,531,783	+		Ga0059261_3401	0.64	+2.6
3,531,783	+		Ga0059261_3401	0.64	+1.1
3,531,783	+		Ga0059261_3401	0.64	+0.4
3,531,783	+		Ga0059261_3401	0.64	+1.1
3,531,783	+		Ga0059261_3401	0.64	+0.5
3,531,783	+		Ga0059261_3401	0.64	-0.1
3,531,783	+		Ga0059261_3401	0.64	-1.3
3,531,784	-		Ga0059261_3401	0.64	+1.2
3,531,784	-		Ga0059261_3401	0.64	+0.3
3,531,784	-		Ga0059261_3401	0.64	+0.3
3,531,784	-		Ga0059261_3401	0.64	-1.0
3,531,784	-		Ga0059261_3401	0.64	-0.4
3,531,843	+		Ga0059261_3401	0.75	-0.3
3,531,843	+		Ga0059261_3401	0.75	+0.2
3,531,843	+		Ga0059261_3401	0.75	+0.3
3,531,843	+		Ga0059261_3401	0.75	+0.3
3,531,843	+				-1.0
3,531,843	+		Ga0059261_3401	0.75	+0.5
3,531,843	+		Ga0059261_3401	0.75	+0.1
3,531,844	-		Ga0059261_3401	0.76	-2.0
3,531,844	-		Ga0059261_3401	0.76	-0.1
3,531,844	-		Ga0059261_3401	0.76	+0.3
3,531,860	+		Ga0059261_3401	0.79	+0.2
3,531,861	-		Ga0059261_3401	0.79	-0.8
3,531,940	+				+1.6
3,531,940	+				+0.6
3,531,940	+				+0.7
3,531,941	-				-0.8
3,531,941	-				-0.8
3,531,941	-				+0.6
3,531,941	-				-0.5
3,531,965	+				+0.5
3,531,965	+				+0.2
3,531,965	+				+0.2
3,531,966	-				+0.4
3,531,966	-				-0.6
3,532,036	+				+0.9
3,532,036	+				+0.4
3,532,036	+				+0.3
3,532,037	-				+0.2
3,532,483	+				+1.6
3,532,483	+				+0.0
3,532,484	-				+0.8
3,532,484	-				-0.1
3,532,484	-				+0.1
3,532,538	-				+0.5
3,532,538	-				+0.6
3,532,546	+				+0.9
3,532,546	+				+0.5
3,532,546	+				+1.2
3,532,547	-				+1.1
3,532,547	-				+0.5
3,532,547	-				+0.7
3,532,736	+		Ga0059261_3403	0.22	+1.1
3,532,736	+				-1.0
3,532,736	+				-1.2
3,532,737	-		Ga0059261_3403	0.22	+0.3
3,532,747	+		Ga0059261_3403	0.22	-1.0
3,532,748	-		Ga0059261_3403	0.22	+0.3
3,532,748	-		Ga0059261_3403	0.22	+0.3
3,532,748	-		Ga0059261_3403	0.22	-0.6
3,532,748	-		Ga0059261_3403	0.22	-0.6
3,532,780	+		Ga0059261_3403	0.24	+0.9
3,532,780	+		Ga0059261_3403	0.24	+0.8
3,532,780	+				+2.2
3,532,780	+		Ga0059261_3403	0.24	+0.0
3,532,780	+		Ga0059261_3403	0.24	+0.5
3,532,780	+		Ga0059261_3403	0.24	+2.4
3,532,781	-		Ga0059261_3403	0.25	-0.1
3,532,781	-		Ga0059261_3403	0.25	+0.9
3,532,835	+		Ga0059261_3403	0.28	+0.5
3,532,935	+		Ga0059261_3403	0.35	+1.1
3,532,935	+		Ga0059261_3403	0.35	-0.7
3,532,935	+		Ga0059261_3403	0.35	+0.1
3,532,936	-		Ga0059261_3403	0.35	+1.2
3,532,936	-		Ga0059261_3403	0.35	+0.7
3,532,936	-		Ga0059261_3403	0.35	+1.5