Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3287

Experiment: Nickel (II) chloride 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1.5 mM
3,416,265	+		Ga0059261_3286	0.16	+0.0
3,416,265	+		Ga0059261_3286	0.16	-0.2
3,416,266	-		Ga0059261_3286	0.17	+0.2
3,416,266	-		Ga0059261_3286	0.17	+0.9
3,416,266	-		Ga0059261_3286	0.17	-1.0
3,416,314	+		Ga0059261_3286	0.21	-0.5
3,416,314	+		Ga0059261_3286	0.21	+0.2
3,416,315	-		Ga0059261_3286	0.21	+0.8
3,416,361	+		Ga0059261_3286	0.25	-0.6
3,416,361	+		Ga0059261_3286	0.25	+0.0
3,416,361	+		Ga0059261_3286	0.25	-0.2
3,416,361	+		Ga0059261_3286	0.25	-0.2
3,416,361	+		Ga0059261_3286	0.25	+0.2
3,416,361	+		Ga0059261_3286	0.25	-1.8
3,416,361	+		Ga0059261_3286	0.25	+0.1
3,416,361	+		Ga0059261_3286	0.25	+0.9
3,416,361	+		Ga0059261_3286	0.25	-0.3
3,416,361	+		Ga0059261_3286	0.25	-1.1
3,416,362	-		Ga0059261_3286	0.25	+0.6
3,416,362	-		Ga0059261_3286	0.25	-0.3
3,416,362	-		Ga0059261_3286	0.25	-0.8
3,416,362	-		Ga0059261_3286	0.25	-0.2
3,416,362	-		Ga0059261_3286	0.25	-1.0
3,416,362	-		Ga0059261_3286	0.25	-0.4
3,416,404	+		Ga0059261_3286	0.28	-1.3
3,416,405	-		Ga0059261_3286	0.28	-0.7
3,416,405	-		Ga0059261_3286	0.28	-0.0
3,416,435	+		Ga0059261_3286	0.31	-0.7
3,416,435	+		Ga0059261_3286	0.31	+0.9
3,416,435	+		Ga0059261_3286	0.31	+0.7
3,416,436	-		Ga0059261_3286	0.31	+0.2
3,416,436	-		Ga0059261_3286	0.31	-0.5
3,416,436	-		Ga0059261_3286	0.31	-0.3
3,416,572	+		Ga0059261_3286	0.42	-0.0
3,416,572	+		Ga0059261_3286	0.42	+1.6
3,416,573	-		Ga0059261_3286	0.43	-1.3
3,416,582	+		Ga0059261_3286	0.43	-0.1
3,416,582	+		Ga0059261_3286	0.43	+0.1
3,416,583	-		Ga0059261_3286	0.43	+0.0
3,416,583	-		Ga0059261_3286	0.43	-2.0
3,416,583	-		Ga0059261_3286	0.43	+0.5
3,416,583	-		Ga0059261_3286	0.43	-0.8
3,416,583	-		Ga0059261_3286	0.43	-0.3
3,416,583	-		Ga0059261_3286	0.43	-1.1
3,416,815	+		Ga0059261_3286	0.63	-2.7
3,416,815	+		Ga0059261_3286	0.63	-0.8
3,416,815	+		Ga0059261_3286	0.63	-1.3
3,416,815	+		Ga0059261_3286	0.63	-0.2
3,416,815	+		Ga0059261_3286	0.63	-1.1
3,416,815	+		Ga0059261_3286	0.63	-0.3
3,416,815	+		Ga0059261_3286	0.63	-0.8
3,416,815	+		Ga0059261_3286	0.63	-0.9
3,416,815	+		Ga0059261_3286	0.63	-0.7
3,416,815	+		Ga0059261_3286	0.63	-1.0
3,416,816	-		Ga0059261_3286	0.63	-1.1
3,416,816	-		Ga0059261_3286	0.63	-0.8
3,416,816	-		Ga0059261_3286	0.63	-0.7
3,416,816	-		Ga0059261_3286	0.63	-0.6
3,416,816	-		Ga0059261_3286	0.63	-0.4
3,416,816	-		Ga0059261_3286	0.63	-1.6
3,416,816	-		Ga0059261_3286	0.63	+0.4
3,416,816	-		Ga0059261_3286	0.63	+0.3
3,416,816	-		Ga0059261_3286	0.63	-0.2
3,416,816	-		Ga0059261_3286	0.63	-0.0
3,417,023	+		Ga0059261_3286	0.81	+0.1
3,417,294	+				+0.8
3,417,294	+				+0.6
3,417,294	+				-0.1
3,417,295	-				+0.2
3,417,295	-				-0.8
3,417,295	-				+0.2
3,417,295	-				-0.6
3,417,295	-				-0.3
3,417,295	-				+0.4
3,417,434	+		Ga0059261_3287	0.17	+0.7
3,417,435	-		Ga0059261_3287	0.17	+0.7
3,417,435	-		Ga0059261_3287	0.17	+0.8
3,417,435	-		Ga0059261_3287	0.17	+0.2
3,417,606	+		Ga0059261_3287	0.34	-0.1
3,417,606	+		Ga0059261_3287	0.34	+0.2
3,417,607	-		Ga0059261_3287	0.34	+0.9
3,417,608	+		Ga0059261_3287	0.34	+0.6
3,417,608	+		Ga0059261_3287	0.34	+0.6
3,417,608	+		Ga0059261_3287	0.34	-0.6
3,417,609	-		Ga0059261_3287	0.34	+0.5
3,417,609	-		Ga0059261_3287	0.34	+0.4
3,417,609	-		Ga0059261_3287	0.34	+0.6
3,417,609	-		Ga0059261_3287	0.34	+0.6
3,417,609	-		Ga0059261_3287	0.34	+0.2
3,417,768	-		Ga0059261_3287	0.50	+0.8
3,417,768	-		Ga0059261_3287	0.50	+1.5
3,417,838	-		Ga0059261_3287	0.56	+0.7
3,417,838	-		Ga0059261_3287	0.56	+0.4
3,417,838	-		Ga0059261_3287	0.56	+0.1
3,417,852	-		Ga0059261_3287	0.58	+0.7
3,417,852	-		Ga0059261_3287	0.58	+0.7
3,418,005	-		Ga0059261_3287	0.73	+1.2
3,418,005	-		Ga0059261_3287	0.73	+0.1
3,418,005	-		Ga0059261_3287	0.73	+0.1
3,418,043	+		Ga0059261_3287	0.77	+1.8
3,418,043	+				+2.2
3,418,049	+		Ga0059261_3287	0.77	+0.1
3,418,112	+		Ga0059261_3287	0.83	-0.4
3,418,113	-		Ga0059261_3287	0.83	-0.4
3,418,113	-		Ga0059261_3287	0.83	+0.3
3,418,126	-		Ga0059261_3287	0.85	-0.6
3,418,127	+		Ga0059261_3287	0.85	+0.7
3,418,128	-		Ga0059261_3287	0.85	+0.1
3,418,128	-		Ga0059261_3287	0.85	-0.9
3,418,128	-		Ga0059261_3287	0.85	-0.2
3,418,182	+				+1.2
3,418,182	+				+0.6
3,418,262	+				-0.3
3,418,345	+				+0.3
3,418,345	+				+0.7
3,418,345	+				+0.4
3,418,346	-				-0.2
3,418,346	-				-0.1
3,418,372	+				-0.2
3,418,372	+				+0.2
3,418,372	+				+0.9
3,418,373	-				-1.5
3,418,373	-				+0.3
3,418,373	-				+0.6
3,418,373	-				+1.6
3,418,503	+		Ga0059261_3288	0.11	-0.1
3,418,503	+		Ga0059261_3288	0.11	-0.2
3,418,503	+		Ga0059261_3288	0.11	-0.3
3,418,503	+		Ga0059261_3288	0.11	-0.2
3,418,503	+		Ga0059261_3288	0.11	-0.2
3,418,503	+		Ga0059261_3288	0.11	-0.5
3,418,503	+		Ga0059261_3288	0.11	-0.9
3,418,503	+		Ga0059261_3288	0.11	-0.4
3,418,503	+		Ga0059261_3288	0.11	+0.5
3,418,503	+		Ga0059261_3288	0.11	-0.7
3,418,503	+		Ga0059261_3288	0.11	-0.5
3,418,504	-		Ga0059261_3288	0.11	-0.2
3,418,504	-		Ga0059261_3288	0.11	+0.6
3,418,504	-				-0.4
3,418,504	-		Ga0059261_3288	0.11	-0.6
3,418,560	-		Ga0059261_3288	0.17	-0.3
3,418,560	-		Ga0059261_3288	0.17	+1.9
3,418,705	+		Ga0059261_3288	0.33	-0.3
3,418,705	+		Ga0059261_3288	0.33	-1.0
3,418,705	+				+0.0
3,418,705	+		Ga0059261_3288	0.33	+0.2
3,418,706	-		Ga0059261_3288	0.33	+0.9
3,418,706	-		Ga0059261_3288	0.33	+0.3
3,418,706	-		Ga0059261_3288	0.33	+0.1
3,418,706	-		Ga0059261_3288	0.33	-0.7
3,418,706	-				+0.3
3,418,706	-		Ga0059261_3288	0.33	-0.4
3,418,706	-		Ga0059261_3288	0.33	-0.1
3,418,920	+		Ga0059261_3288	0.56	+0.4
3,418,920	+		Ga0059261_3288	0.56	+0.1
3,418,920	+		Ga0059261_3288	0.56	-0.3
3,418,920	+		Ga0059261_3288	0.56	-1.1
3,418,921	-		Ga0059261_3288	0.56	+0.8
3,418,921	-		Ga0059261_3288	0.56	-0.2
3,418,921	-		Ga0059261_3288	0.56	+0.5
3,418,921	-		Ga0059261_3288	0.56	+0.2
3,418,921	-		Ga0059261_3288	0.56	-0.3
3,418,921	-		Ga0059261_3288	0.56	-1.4
3,418,921	-		Ga0059261_3288	0.56	+0.4
3,418,932	+		Ga0059261_3288	0.57	-0.0
3,418,933	-		Ga0059261_3288	0.57	+1.2
3,418,933	-		Ga0059261_3288	0.57	+0.7
3,418,986	+		Ga0059261_3288	0.63	-0.4
3,418,986	+		Ga0059261_3288	0.63	+1.4
3,418,986	+		Ga0059261_3288	0.63	+0.4
3,418,986	+		Ga0059261_3288	0.63	-0.4
3,418,986	+		Ga0059261_3288	0.63	+0.4
3,418,986	+		Ga0059261_3288	0.63	+0.6
3,418,987	-		Ga0059261_3288	0.63	-0.1
3,418,987	-		Ga0059261_3288	0.63	-0.0
3,418,987	-		Ga0059261_3288	0.63	-1.1
3,418,987	-		Ga0059261_3288	0.63	+0.8
3,418,987	-		Ga0059261_3288	0.63	-0.3
3,418,987	-		Ga0059261_3288	0.63	+0.4
3,418,987	-		Ga0059261_3288	0.63	-1.4
3,418,987	-		Ga0059261_3288	0.63	-1.9
3,419,061	+		Ga0059261_3288	0.71	-0.1
3,419,062	-		Ga0059261_3288	0.71	+0.6
3,419,139	+		Ga0059261_3288	0.79	-0.3
3,419,140	-		Ga0059261_3288	0.79	+1.3
3,419,140	-		Ga0059261_3288	0.79	+0.5
3,419,140	-		Ga0059261_3288	0.79	+2.1