Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3466 and Ac3H11_3467 are separated by 3 nucleotides Ac3H11_3467 and Ac3H11_3468 are separated by 23 nucleotides Ac3H11_3468 and Ac3H11_3469 overlap by 4 nucleotides
Ac3H11_3466 - Chromosome (plasmid) partitioning protein ParB, at 18,021 to 20,156
_3466
Ac3H11_3467 - hypothetical protein, at 20,160 to 20,420
_3467
Ac3H11_3468 - COG1896: Predicted hydrolases of HD superfamily, at 20,444 to 21,097
_3468
Ac3H11_3469 - hypothetical protein, at 21,094 to 21,453
_3469
Position (kb) 20
21 Strain fitness (log2 ratio) -1
0
1
2 at 19.294 kb on + strand, within Ac3H11_3466 at 19.294 kb on + strand, within Ac3H11_3466 at 19.294 kb on + strand, within Ac3H11_3466 at 19.295 kb on - strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.576 kb on - strand, within Ac3H11_3466 at 19.576 kb on - strand, within Ac3H11_3466 at 19.831 kb on + strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.906 kb on - strand, within Ac3H11_3466 at 19.906 kb on - strand, within Ac3H11_3466 at 20.020 kb on + strand at 20.072 kb on - strand at 20.161 kb on + strand at 20.161 kb on + strand at 20.260 kb on + strand, within Ac3H11_3467 at 20.510 kb on + strand, within Ac3H11_3468 at 20.510 kb on + strand, within Ac3H11_3468 at 20.510 kb on + strand, within Ac3H11_3468 at 20.661 kb on + strand, within Ac3H11_3468 at 20.661 kb on + strand, within Ac3H11_3468 at 20.705 kb on + strand, within Ac3H11_3468 at 20.705 kb on + strand, within Ac3H11_3468 at 20.705 kb on + strand, within Ac3H11_3468 at 20.732 kb on + strand, within Ac3H11_3468 at 20.732 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 21.021 kb on + strand, within Ac3H11_3468 at 21.021 kb on + strand, within Ac3H11_3468 at 21.054 kb on + strand at 21.054 kb on + strand at 21.054 kb on + strand at 21.054 kb on + strand at 21.087 kb on + strand at 21.087 kb on + strand at 21.218 kb on + strand, within Ac3H11_3469 at 21.218 kb on + strand, within Ac3H11_3469 at 21.224 kb on + strand, within Ac3H11_3469
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 19,294 + Ac3H11_3466 0.60 -0.2 19,294 + Ac3H11_3466 0.60 -0.6 19,294 + Ac3H11_3466 0.60 +0.6 19,295 - Ac3H11_3466 0.60 +0.5 19,575 + Ac3H11_3466 0.73 -0.6 19,575 + Ac3H11_3466 0.73 +1.1 19,575 + Ac3H11_3466 0.73 +0.4 19,575 + Ac3H11_3466 0.73 +0.0 19,576 - Ac3H11_3466 0.73 -1.3 19,576 - Ac3H11_3466 0.73 -0.6 19,831 + Ac3H11_3466 0.85 -1.1 19,832 - Ac3H11_3466 0.85 -0.2 19,832 - Ac3H11_3466 0.85 -0.9 19,832 - Ac3H11_3466 0.85 -0.3 19,832 - Ac3H11_3466 0.85 -0.3 19,906 - Ac3H11_3466 0.88 +1.9 19,906 - Ac3H11_3466 0.88 -0.6 20,020 + +0.3 20,072 - +0.3 20,161 + -0.2 20,161 + -0.4 20,260 + Ac3H11_3467 0.38 -0.7 20,510 + Ac3H11_3468 0.10 -1.3 20,510 + Ac3H11_3468 0.10 +0.4 20,510 + Ac3H11_3468 0.10 +0.3 20,661 + Ac3H11_3468 0.33 +0.1 20,661 + Ac3H11_3468 0.33 +0.6 20,705 + Ac3H11_3468 0.40 +0.4 20,705 + Ac3H11_3468 0.40 -0.3 20,705 + Ac3H11_3468 0.40 -0.3 20,732 + Ac3H11_3468 0.44 -0.6 20,732 + Ac3H11_3468 0.44 +0.2 20,847 + Ac3H11_3468 0.62 +0.1 20,847 + Ac3H11_3468 0.62 -0.9 20,847 + Ac3H11_3468 0.62 -0.1 20,847 + Ac3H11_3468 0.62 -0.5 20,847 + Ac3H11_3468 0.62 +0.5 20,847 + Ac3H11_3468 0.62 -0.2 21,021 + Ac3H11_3468 0.88 +0.0 21,021 + Ac3H11_3468 0.88 +0.3 21,054 + +0.7 21,054 + +0.4 21,054 + -0.3 21,054 + -0.5 21,087 + +0.1 21,087 + +0.3 21,218 + Ac3H11_3469 0.34 +0.3 21,218 + Ac3H11_3469 0.34 +0.7 21,224 + Ac3H11_3469 0.36 -0.2
Or see this region's nucleotide sequence