Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3464 and Ac3H11_3465 overlap by 4 nucleotides Ac3H11_3465 and Ac3H11_3466 overlap by 1 nucleotides
Ac3H11_3464 - hypothetical protein, at 17,120 to 17,512
_3464
Ac3H11_3465 - hypothetical protein, at 17,509 to 18,021
_3465
Ac3H11_3466 - Chromosome (plasmid) partitioning protein ParB, at 18,021 to 20,156
_3466
Position (kb) 17
18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 16.568 kb on + strand at 16.568 kb on - strand at 16.577 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.818 kb on + strand at 16.819 kb on - strand at 16.819 kb on - strand at 16.826 kb on + strand at 17.057 kb on + strand at 17.058 kb on - strand at 17.058 kb on - strand at 17.194 kb on + strand, within Ac3H11_3464 at 17.194 kb on + strand, within Ac3H11_3464 at 17.371 kb on - strand, within Ac3H11_3464 at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.552 kb on - strand at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.792 kb on + strand, within Ac3H11_3465 at 18.027 kb on - strand at 18.043 kb on + strand at 18.043 kb on + strand at 18.131 kb on + strand at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.544 kb on - strand, within Ac3H11_3466 at 18.688 kb on + strand, within Ac3H11_3466 at 18.790 kb on + strand, within Ac3H11_3466 at 18.791 kb on - strand, within Ac3H11_3466 at 18.900 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 16,568 + -0.2 16,568 - -0.7 16,577 + +0.1 16,747 + +0.1 16,747 + -1.6 16,747 + +0.4 16,747 + +0.0 16,747 + +1.9 16,747 + +0.3 16,747 + -0.7 16,747 + +0.3 16,747 + +0.5 16,748 - -0.1 16,748 - -0.8 16,748 - +0.6 16,748 - -0.4 16,818 + -0.1 16,819 - -0.8 16,819 - +1.8 16,826 + -0.8 17,057 + +0.5 17,058 - -0.0 17,058 - -0.5 17,194 + Ac3H11_3464 0.19 -0.1 17,194 + Ac3H11_3464 0.19 -0.9 17,371 - Ac3H11_3464 0.64 -1.3 17,551 + +1.1 17,551 + -0.2 17,551 + +0.1 17,551 + +0.2 17,551 + -0.9 17,552 - +0.1 17,611 + Ac3H11_3465 0.20 -0.3 17,611 + Ac3H11_3465 0.20 -1.0 17,611 + Ac3H11_3465 0.20 +0.9 17,611 + Ac3H11_3465 0.20 +0.6 17,611 + Ac3H11_3465 0.20 -0.3 17,612 - Ac3H11_3465 0.20 -0.1 17,612 - Ac3H11_3465 0.20 +0.1 17,612 - Ac3H11_3465 0.20 +1.2 17,684 + Ac3H11_3465 0.34 -0.9 17,684 + Ac3H11_3465 0.34 -2.4 17,685 - Ac3H11_3465 0.34 -0.0 17,685 - Ac3H11_3465 0.34 -2.0 17,687 + Ac3H11_3465 0.35 -0.1 17,687 + Ac3H11_3465 0.35 -0.7 17,687 + Ac3H11_3465 0.35 -0.4 17,687 + Ac3H11_3465 0.35 +1.2 17,792 + Ac3H11_3465 0.55 +0.7 18,027 - -0.2 18,043 + -0.3 18,043 + -0.1 18,131 + -0.4 18,543 + Ac3H11_3466 0.24 -0.5 18,543 + Ac3H11_3466 0.24 -0.5 18,543 + Ac3H11_3466 0.24 +0.6 18,543 + Ac3H11_3466 0.24 -1.6 18,544 - Ac3H11_3466 0.24 -0.0 18,688 + Ac3H11_3466 0.31 -1.1 18,790 + Ac3H11_3466 0.36 -0.5 18,791 - Ac3H11_3466 0.36 -0.8 18,900 + Ac3H11_3466 0.41 -0.9 19,015 + Ac3H11_3466 0.47 +0.8 19,015 + Ac3H11_3466 0.47 -0.2 19,015 + Ac3H11_3466 0.47 +0.2 19,016 - Ac3H11_3466 0.47 -0.3 19,016 - Ac3H11_3466 0.47 -0.2
Or see this region's nucleotide sequence