Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2894 and Ac3H11_2895 are separated by 380 nucleotides Ac3H11_2895 and Ac3H11_2896 are separated by 556 nucleotides
Ac3H11_2894 - LysR-family transcriptional regulator clustered with PA0057, at 1,204,089 to 1,204,982
_2894
Ac3H11_2895 - Mobile element protein, at 1,205,363 to 1,206,514
_2895
Ac3H11_2896 - Putative extracytoplasmic tricarboxylate-binding receptor of a tripartite transporter, in cluster with DUF1446, at 1,207,071 to 1,208,063
_2896
Position (kb)
1205
1206
1207 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1204.603 kb on - strand, within Ac3H11_2894 at 1204.603 kb on - strand, within Ac3H11_2894 at 1204.665 kb on + strand, within Ac3H11_2894 at 1204.666 kb on - strand, within Ac3H11_2894 at 1204.666 kb on - strand, within Ac3H11_2894 at 1204.813 kb on - strand, within Ac3H11_2894 at 1204.827 kb on + strand, within Ac3H11_2894 at 1204.827 kb on + strand, within Ac3H11_2894 at 1204.827 kb on + strand, within Ac3H11_2894 at 1204.828 kb on - strand, within Ac3H11_2894 at 1204.890 kb on + strand, within Ac3H11_2894 at 1204.890 kb on + strand, within Ac3H11_2894 at 1204.891 kb on - strand, within Ac3H11_2894 at 1204.891 kb on - strand, within Ac3H11_2894 at 1204.891 kb on - strand, within Ac3H11_2894 at 1204.891 kb on - strand, within Ac3H11_2894 at 1204.891 kb on - strand, within Ac3H11_2894 at 1204.899 kb on + strand at 1204.991 kb on - strand at 1204.991 kb on - strand at 1205.006 kb on - strand at 1205.006 kb on - strand at 1205.006 kb on - strand at 1205.006 kb on - strand at 1205.006 kb on - strand at 1205.026 kb on - strand at 1205.483 kb on + strand, within Ac3H11_2895 at 1205.483 kb on + strand, within Ac3H11_2895 at 1205.484 kb on - strand, within Ac3H11_2895 at 1205.484 kb on - strand, within Ac3H11_2895 at 1205.530 kb on - strand, within Ac3H11_2895 at 1205.800 kb on + strand, within Ac3H11_2895 at 1205.801 kb on - strand, within Ac3H11_2895 at 1205.934 kb on + strand, within Ac3H11_2895 at 1205.934 kb on + strand, within Ac3H11_2895 at 1205.934 kb on + strand, within Ac3H11_2895 at 1205.934 kb on + strand, within Ac3H11_2895 at 1205.935 kb on - strand, within Ac3H11_2895 at 1205.935 kb on - strand, within Ac3H11_2895 at 1205.935 kb on - strand, within Ac3H11_2895 at 1205.935 kb on - strand, within Ac3H11_2895 at 1205.935 kb on - strand, within Ac3H11_2895 at 1205.935 kb on - strand, within Ac3H11_2895 at 1205.945 kb on + strand, within Ac3H11_2895 at 1205.946 kb on - strand, within Ac3H11_2895 at 1206.074 kb on + strand, within Ac3H11_2895 at 1206.075 kb on - strand, within Ac3H11_2895 at 1206.075 kb on - strand, within Ac3H11_2895 at 1206.075 kb on - strand, within Ac3H11_2895 at 1206.075 kb on - strand, within Ac3H11_2895 at 1206.200 kb on + strand, within Ac3H11_2895 at 1206.200 kb on + strand, within Ac3H11_2895 at 1206.200 kb on + strand, within Ac3H11_2895 at 1206.200 kb on + strand, within Ac3H11_2895 at 1206.200 kb on + strand, within Ac3H11_2895 at 1206.200 kb on + strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.201 kb on - strand, within Ac3H11_2895 at 1206.238 kb on + strand, within Ac3H11_2895 at 1206.262 kb on + strand, within Ac3H11_2895 at 1206.263 kb on - strand, within Ac3H11_2895 at 1206.263 kb on - strand, within Ac3H11_2895 at 1206.303 kb on - strand, within Ac3H11_2895 at 1206.303 kb on - strand, within Ac3H11_2895 at 1206.705 kb on + strand at 1206.705 kb on + strand at 1206.705 kb on + strand at 1206.717 kb on + strand at 1206.717 kb on + strand at 1206.717 kb on + strand at 1206.717 kb on + strand at 1206.717 kb on + strand at 1206.718 kb on - strand at 1206.718 kb on - strand at 1206.771 kb on - strand at 1206.853 kb on - strand at 1206.888 kb on - strand at 1207.266 kb on - strand, within Ac3H11_2896 at 1207.266 kb on - strand, within Ac3H11_2896 at 1207.266 kb on - strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.295 kb on - strand, within Ac3H11_2896 at 1207.307 kb on - strand, within Ac3H11_2896 at 1207.493 kb on - strand, within Ac3H11_2896
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,204,603 - Ac3H11_2894 0.57 +0.1 1,204,603 - Ac3H11_2894 0.57 +0.6 1,204,665 + Ac3H11_2894 0.64 -0.5 1,204,666 - Ac3H11_2894 0.65 +0.4 1,204,666 - Ac3H11_2894 0.65 +1.1 1,204,813 - Ac3H11_2894 0.81 -0.5 1,204,827 + Ac3H11_2894 0.83 +0.5 1,204,827 + Ac3H11_2894 0.83 -1.1 1,204,827 + Ac3H11_2894 0.83 +0.7 1,204,828 - Ac3H11_2894 0.83 -0.7 1,204,890 + Ac3H11_2894 0.90 -0.1 1,204,890 + Ac3H11_2894 0.90 -1.5 1,204,891 - Ac3H11_2894 0.90 -0.6 1,204,891 - Ac3H11_2894 0.90 +0.2 1,204,891 - Ac3H11_2894 0.90 -0.0 1,204,891 - Ac3H11_2894 0.90 -0.2 1,204,891 - Ac3H11_2894 0.90 +0.1 1,204,899 + +0.3 1,204,991 - +0.5 1,204,991 - +0.2 1,205,006 - +0.4 1,205,006 - +0.6 1,205,006 - -0.1 1,205,006 - +0.1 1,205,006 - -1.4 1,205,026 - -0.1 1,205,483 + Ac3H11_2895 0.10 -1.3 1,205,483 + Ac3H11_2895 0.10 +0.3 1,205,484 - Ac3H11_2895 0.11 -0.3 1,205,484 - Ac3H11_2895 0.11 -0.1 1,205,530 - Ac3H11_2895 0.14 -0.3 1,205,800 + Ac3H11_2895 0.38 +1.2 1,205,801 - Ac3H11_2895 0.38 +0.3 1,205,934 + Ac3H11_2895 0.50 +0.4 1,205,934 + Ac3H11_2895 0.50 -1.7 1,205,934 + Ac3H11_2895 0.50 -0.9 1,205,934 + Ac3H11_2895 0.50 -1.5 1,205,935 - Ac3H11_2895 0.50 -0.4 1,205,935 - Ac3H11_2895 0.50 +0.2 1,205,935 - Ac3H11_2895 0.50 +1.5 1,205,935 - Ac3H11_2895 0.50 -0.5 1,205,935 - Ac3H11_2895 0.50 +0.1 1,205,935 - Ac3H11_2895 0.50 +0.3 1,205,945 + Ac3H11_2895 0.51 -0.4 1,205,946 - Ac3H11_2895 0.51 -1.0 1,206,074 + Ac3H11_2895 0.62 +0.4 1,206,075 - Ac3H11_2895 0.62 -1.1 1,206,075 - Ac3H11_2895 0.62 -0.6 1,206,075 - Ac3H11_2895 0.62 -0.3 1,206,075 - Ac3H11_2895 0.62 -1.0 1,206,200 + Ac3H11_2895 0.73 -0.2 1,206,200 + Ac3H11_2895 0.73 -0.2 1,206,200 + Ac3H11_2895 0.73 +0.3 1,206,200 + Ac3H11_2895 0.73 +1.2 1,206,200 + Ac3H11_2895 0.73 -1.1 1,206,200 + Ac3H11_2895 0.73 -0.4 1,206,201 - Ac3H11_2895 0.73 +0.8 1,206,201 - Ac3H11_2895 0.73 -0.5 1,206,201 - Ac3H11_2895 0.73 -0.0 1,206,201 - Ac3H11_2895 0.73 -0.9 1,206,201 - Ac3H11_2895 0.73 -0.4 1,206,201 - Ac3H11_2895 0.73 -2.9 1,206,201 - Ac3H11_2895 0.73 -0.5 1,206,201 - Ac3H11_2895 0.73 +0.5 1,206,201 - Ac3H11_2895 0.73 -0.7 1,206,238 + Ac3H11_2895 0.76 -0.3 1,206,262 + Ac3H11_2895 0.78 -0.6 1,206,263 - Ac3H11_2895 0.78 +0.7 1,206,263 - Ac3H11_2895 0.78 +0.4 1,206,303 - Ac3H11_2895 0.82 -1.8 1,206,303 - Ac3H11_2895 0.82 +0.6 1,206,705 + +0.1 1,206,705 + +0.8 1,206,705 + -0.2 1,206,717 + +0.0 1,206,717 + +0.2 1,206,717 + +0.1 1,206,717 + -0.3 1,206,717 + -1.1 1,206,718 - +0.1 1,206,718 - -0.2 1,206,771 - +0.6 1,206,853 - -0.1 1,206,888 - -0.1 1,207,266 - Ac3H11_2896 0.20 -0.4 1,207,266 - Ac3H11_2896 0.20 -0.9 1,207,266 - Ac3H11_2896 0.20 -0.3 1,207,279 + Ac3H11_2896 0.21 +0.3 1,207,279 + Ac3H11_2896 0.21 +0.2 1,207,279 + Ac3H11_2896 0.21 -0.9 1,207,279 + Ac3H11_2896 0.21 -0.2 1,207,295 - Ac3H11_2896 0.23 -0.3 1,207,307 - Ac3H11_2896 0.24 -0.3 1,207,493 - Ac3H11_2896 0.42 -0.8
Or see this region's nucleotide sequence