Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19270 and ABZR86_RS19275 are separated by 134 nucleotides ABZR86_RS19275 and ABZR86_RS19280 are separated by 260 nucleotides ABZR86_RS19280 and ABZR86_RS19285 are separated by 9 nucleotides
ABZR86_RS19270: ABZR86_RS19270 - carbon starvation CstA family protein, at 311,613 to 313,688
_RS19270
ABZR86_RS19275: ABZR86_RS19275 - hybrid sensor histidine kinase/response regulator, at 313,823 to 317,335
_RS19275
ABZR86_RS19280: ABZR86_RS19280 - peptide deformylase, at 317,596 to 318,135
_RS19280
ABZR86_RS19285: ABZR86_RS19285 - HAMP domain-containing sensor histidine kinase, at 318,145 to 319,542
_RS19285
Position (kb) 313
314
315
316
317
318 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 312.829 kb on + strand, within ABZR86_RS19270 at 312.830 kb on - strand, within ABZR86_RS19270 at 313.035 kb on - strand, within ABZR86_RS19270 at 313.036 kb on + strand, within ABZR86_RS19270 at 313.036 kb on + strand, within ABZR86_RS19270 at 313.037 kb on - strand, within ABZR86_RS19270 at 313.045 kb on + strand, within ABZR86_RS19270 at 313.045 kb on + strand, within ABZR86_RS19270 at 313.046 kb on - strand, within ABZR86_RS19270 at 313.046 kb on - strand, within ABZR86_RS19270 at 313.088 kb on + strand, within ABZR86_RS19270 at 313.089 kb on - strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.333 kb on + strand, within ABZR86_RS19270 at 313.432 kb on + strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.491 kb on + strand at 313.492 kb on - strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.516 kb on + strand at 313.516 kb on + strand at 313.517 kb on - strand at 313.682 kb on + strand at 313.682 kb on + strand at 313.769 kb on + strand at 314.406 kb on + strand, within ABZR86_RS19275 at 314.406 kb on + strand, within ABZR86_RS19275 at 314.407 kb on - strand, within ABZR86_RS19275 at 314.805 kb on + strand, within ABZR86_RS19275 at 314.806 kb on - strand, within ABZR86_RS19275 at 315.042 kb on + strand, within ABZR86_RS19275 at 315.042 kb on + strand, within ABZR86_RS19275 at 315.153 kb on + strand, within ABZR86_RS19275 at 315.153 kb on + strand, within ABZR86_RS19275 at 315.154 kb on - strand, within ABZR86_RS19275 at 315.154 kb on - strand, within ABZR86_RS19275 at 315.267 kb on + strand, within ABZR86_RS19275 at 315.267 kb on + strand, within ABZR86_RS19275 at 315.267 kb on + strand, within ABZR86_RS19275 at 315.268 kb on - strand, within ABZR86_RS19275 at 315.268 kb on - strand, within ABZR86_RS19275 at 315.268 kb on - strand, within ABZR86_RS19275 at 315.268 kb on - strand, within ABZR86_RS19275 at 315.666 kb on + strand, within ABZR86_RS19275 at 315.667 kb on - strand, within ABZR86_RS19275 at 315.667 kb on - strand, within ABZR86_RS19275 at 315.867 kb on + strand, within ABZR86_RS19275 at 315.954 kb on + strand, within ABZR86_RS19275 at 315.954 kb on + strand, within ABZR86_RS19275 at 315.955 kb on - strand, within ABZR86_RS19275 at 315.978 kb on + strand, within ABZR86_RS19275 at 315.978 kb on + strand, within ABZR86_RS19275 at 315.978 kb on + strand, within ABZR86_RS19275 at 315.978 kb on + strand, within ABZR86_RS19275 at 315.979 kb on - strand, within ABZR86_RS19275 at 315.979 kb on - strand, within ABZR86_RS19275 at 315.979 kb on - strand, within ABZR86_RS19275 at 316.249 kb on - strand, within ABZR86_RS19275 at 316.296 kb on + strand, within ABZR86_RS19275 at 316.296 kb on + strand, within ABZR86_RS19275 at 316.296 kb on + strand, within ABZR86_RS19275 at 316.297 kb on - strand, within ABZR86_RS19275 at 316.297 kb on - strand, within ABZR86_RS19275 at 316.326 kb on + strand, within ABZR86_RS19275 at 316.326 kb on + strand, within ABZR86_RS19275 at 316.326 kb on + strand, within ABZR86_RS19275 at 316.327 kb on - strand, within ABZR86_RS19275 at 316.341 kb on + strand, within ABZR86_RS19275 at 316.341 kb on + strand, within ABZR86_RS19275 at 316.341 kb on + strand, within ABZR86_RS19275 at 316.341 kb on + strand, within ABZR86_RS19275 at 316.342 kb on - strand, within ABZR86_RS19275 at 316.443 kb on + strand, within ABZR86_RS19275 at 316.467 kb on + strand, within ABZR86_RS19275 at 316.524 kb on + strand, within ABZR86_RS19275 at 316.524 kb on + strand, within ABZR86_RS19275 at 316.525 kb on - strand, within ABZR86_RS19275 at 316.525 kb on - strand, within ABZR86_RS19275 at 316.525 kb on - strand, within ABZR86_RS19275 at 316.617 kb on + strand, within ABZR86_RS19275 at 316.618 kb on - strand, within ABZR86_RS19275 at 316.618 kb on - strand, within ABZR86_RS19275 at 316.647 kb on + strand, within ABZR86_RS19275 at 316.647 kb on + strand, within ABZR86_RS19275 at 316.647 kb on + strand, within ABZR86_RS19275 at 316.647 kb on + strand, within ABZR86_RS19275 at 316.788 kb on + strand, within ABZR86_RS19275 at 316.789 kb on - strand, within ABZR86_RS19275 at 316.789 kb on - strand, within ABZR86_RS19275 at 316.789 kb on - strand, within ABZR86_RS19275 at 317.124 kb on - strand at 317.181 kb on + strand at 317.181 kb on + strand at 317.181 kb on + strand at 317.182 kb on - strand at 317.182 kb on - strand at 317.182 kb on - strand at 317.182 kb on - strand at 317.244 kb on + strand at 317.244 kb on + strand at 317.245 kb on - strand at 317.245 kb on - strand at 317.245 kb on - strand at 317.245 kb on - strand at 317.384 kb on - strand at 317.384 kb on - strand at 317.384 kb on - strand at 317.514 kb on + strand at 317.515 kb on - strand at 317.935 kb on + strand, within ABZR86_RS19280 at 317.936 kb on - strand, within ABZR86_RS19280 at 317.936 kb on - strand, within ABZR86_RS19280 at 318.134 kb on - strand at 318.273 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 312,829 + ABZR86_RS19270 0.59 +0.4 312,830 - ABZR86_RS19270 0.59 +1.0 313,035 - ABZR86_RS19270 0.68 +0.1 313,036 + ABZR86_RS19270 0.69 +1.2 313,036 + ABZR86_RS19270 0.69 +1.6 313,037 - ABZR86_RS19270 0.69 +1.4 313,045 + ABZR86_RS19270 0.69 +0.4 313,045 + ABZR86_RS19270 0.69 -1.4 313,046 - ABZR86_RS19270 0.69 +1.3 313,046 - ABZR86_RS19270 0.69 +1.3 313,088 + ABZR86_RS19270 0.71 -0.7 313,089 - ABZR86_RS19270 0.71 +1.7 313,090 + ABZR86_RS19270 0.71 -3.7 313,090 + ABZR86_RS19270 0.71 -1.0 313,090 + ABZR86_RS19270 0.71 -0.4 313,090 + ABZR86_RS19270 0.71 +1.6 313,091 - ABZR86_RS19270 0.71 +0.5 313,091 - ABZR86_RS19270 0.71 +1.8 313,091 - ABZR86_RS19270 0.71 -0.9 313,091 - ABZR86_RS19270 0.71 +1.1 313,333 + ABZR86_RS19270 0.83 +0.2 313,432 + ABZR86_RS19270 0.88 -3.6 313,433 - ABZR86_RS19270 0.88 +0.4 313,433 - ABZR86_RS19270 0.88 -2.4 313,433 - ABZR86_RS19270 0.88 +0.4 313,433 - ABZR86_RS19270 0.88 -1.6 313,491 + -0.6 313,492 - -1.2 313,495 + +1.3 313,495 + -3.0 313,495 + -0.3 313,495 + +0.1 313,495 + +2.0 313,495 + -0.9 313,495 + -1.1 313,496 - +0.3 313,496 - +1.0 313,496 - -0.6 313,496 - -2.4 313,496 - +0.1 313,496 - -0.4 313,496 - -0.1 313,496 - +1.8 313,516 + -0.6 313,516 + -0.2 313,517 - +0.1 313,682 + -1.5 313,682 + +0.3 313,769 + +0.6 314,406 + ABZR86_RS19275 0.17 -0.3 314,406 + ABZR86_RS19275 0.17 +0.8 314,407 - ABZR86_RS19275 0.17 -0.4 314,805 + ABZR86_RS19275 0.28 -2.1 314,806 - ABZR86_RS19275 0.28 +0.2 315,042 + ABZR86_RS19275 0.35 -3.3 315,042 + ABZR86_RS19275 0.35 -0.3 315,153 + ABZR86_RS19275 0.38 -0.1 315,153 + ABZR86_RS19275 0.38 +0.9 315,154 - ABZR86_RS19275 0.38 +0.5 315,154 - ABZR86_RS19275 0.38 +2.0 315,267 + ABZR86_RS19275 0.41 +1.0 315,267 + ABZR86_RS19275 0.41 +1.1 315,267 + ABZR86_RS19275 0.41 -0.8 315,268 - ABZR86_RS19275 0.41 +0.0 315,268 - ABZR86_RS19275 0.41 +0.3 315,268 - ABZR86_RS19275 0.41 +0.3 315,268 - ABZR86_RS19275 0.41 +2.0 315,666 + ABZR86_RS19275 0.52 -0.1 315,667 - ABZR86_RS19275 0.52 -0.2 315,667 - ABZR86_RS19275 0.52 +0.6 315,867 + ABZR86_RS19275 0.58 -0.4 315,954 + ABZR86_RS19275 0.61 -2.7 315,954 + ABZR86_RS19275 0.61 -0.0 315,955 - ABZR86_RS19275 0.61 +2.0 315,978 + ABZR86_RS19275 0.61 +0.6 315,978 + ABZR86_RS19275 0.61 -0.1 315,978 + ABZR86_RS19275 0.61 -0.1 315,978 + ABZR86_RS19275 0.61 +0.7 315,979 - ABZR86_RS19275 0.61 +0.8 315,979 - ABZR86_RS19275 0.61 -0.6 315,979 - ABZR86_RS19275 0.61 -0.8 316,249 - ABZR86_RS19275 0.69 +0.0 316,296 + ABZR86_RS19275 0.70 -0.4 316,296 + ABZR86_RS19275 0.70 +1.1 316,296 + ABZR86_RS19275 0.70 -0.7 316,297 - ABZR86_RS19275 0.70 -0.4 316,297 - ABZR86_RS19275 0.70 +0.9 316,326 + ABZR86_RS19275 0.71 +0.6 316,326 + ABZR86_RS19275 0.71 +0.4 316,326 + ABZR86_RS19275 0.71 +1.2 316,327 - ABZR86_RS19275 0.71 +0.2 316,341 + ABZR86_RS19275 0.72 -1.0 316,341 + ABZR86_RS19275 0.72 -1.9 316,341 + ABZR86_RS19275 0.72 +1.3 316,341 + ABZR86_RS19275 0.72 +0.1 316,342 - ABZR86_RS19275 0.72 -3.2 316,443 + ABZR86_RS19275 0.75 -0.1 316,467 + ABZR86_RS19275 0.75 +0.2 316,524 + ABZR86_RS19275 0.77 +1.7 316,524 + ABZR86_RS19275 0.77 +0.5 316,525 - ABZR86_RS19275 0.77 -1.1 316,525 - ABZR86_RS19275 0.77 +1.4 316,525 - ABZR86_RS19275 0.77 +0.1 316,617 + ABZR86_RS19275 0.80 -0.6 316,618 - ABZR86_RS19275 0.80 +1.2 316,618 - ABZR86_RS19275 0.80 +0.0 316,647 + ABZR86_RS19275 0.80 +0.0 316,647 + ABZR86_RS19275 0.80 +0.3 316,647 + ABZR86_RS19275 0.80 +0.1 316,647 + ABZR86_RS19275 0.80 +0.2 316,788 + ABZR86_RS19275 0.84 +0.9 316,789 - ABZR86_RS19275 0.84 -1.9 316,789 - ABZR86_RS19275 0.84 -0.4 316,789 - ABZR86_RS19275 0.84 +0.7 317,124 - +2.0 317,181 + +0.1 317,181 + +1.7 317,181 + +0.7 317,182 - +1.3 317,182 - -3.3 317,182 - +1.1 317,182 - +0.3 317,244 + -0.1 317,244 + -0.6 317,245 - -0.1 317,245 - -1.4 317,245 - +0.4 317,245 - -0.9 317,384 - +1.3 317,384 - +0.6 317,384 - -2.5 317,514 + -0.5 317,515 - +0.3 317,935 + ABZR86_RS19280 0.63 -0.7 317,936 - ABZR86_RS19280 0.63 +1.1 317,936 - ABZR86_RS19280 0.63 +1.8 318,134 - -2.8 318,273 + +0.8
Or see this region's nucleotide sequence