Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS18920

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS18915 and ABZR86_RS18920 are separated by 50 nucleotidesABZR86_RS18920 and ABZR86_RS18925 are separated by 162 nucleotides ABZR86_RS18915: ABZR86_RS18915 - glycosyltransferase family 2 protein, at 215,020 to 215,943 _RS18915 ABZR86_RS18920: ABZR86_RS18920 - monofunctional biosynthetic peptidoglycan transglycosylase, at 215,994 to 216,734 _RS18920 ABZR86_RS18925: ABZR86_RS18925 - Hsp33 family molecular chaperone HslO, at 216,897 to 217,793 _RS18925 Position (kb) 215 216 217Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 215.046 kb on - strandat 215.072 kb on + strandat 215.073 kb on - strandat 215.088 kb on - strandat 215.088 kb on - strandat 215.180 kb on + strand, within ABZR86_RS18915at 215.321 kb on + strand, within ABZR86_RS18915at 215.321 kb on + strand, within ABZR86_RS18915at 215.321 kb on + strand, within ABZR86_RS18915at 215.321 kb on - strand, within ABZR86_RS18915at 215.322 kb on - strand, within ABZR86_RS18915at 215.322 kb on - strand, within ABZR86_RS18915at 215.322 kb on - strand, within ABZR86_RS18915at 215.363 kb on + strand, within ABZR86_RS18915at 215.364 kb on - strand, within ABZR86_RS18915at 215.364 kb on - strand, within ABZR86_RS18915at 215.528 kb on + strand, within ABZR86_RS18915at 215.529 kb on - strand, within ABZR86_RS18915at 215.529 kb on - strand, within ABZR86_RS18915at 215.591 kb on + strand, within ABZR86_RS18915at 215.591 kb on + strand, within ABZR86_RS18915at 215.591 kb on + strand, within ABZR86_RS18915at 215.828 kb on + strand, within ABZR86_RS18915at 215.828 kb on + strand, within ABZR86_RS18915at 215.912 kb on + strandat 215.912 kb on + strandat 215.913 kb on - strandat 215.975 kb on + strandat 216.037 kb on + strandat 216.097 kb on + strand, within ABZR86_RS18920at 216.097 kb on + strand, within ABZR86_RS18920at 216.098 kb on - strand, within ABZR86_RS18920at 216.098 kb on - strand, within ABZR86_RS18920at 216.199 kb on + strand, within ABZR86_RS18920at 216.199 kb on + strand, within ABZR86_RS18920at 216.199 kb on + strand, within ABZR86_RS18920at 216.226 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.259 kb on + strand, within ABZR86_RS18920at 216.260 kb on - strand, within ABZR86_RS18920at 216.260 kb on - strand, within ABZR86_RS18920at 216.260 kb on - strand, within ABZR86_RS18920at 216.313 kb on + strand, within ABZR86_RS18920at 216.313 kb on + strand, within ABZR86_RS18920at 216.314 kb on - strand, within ABZR86_RS18920at 216.314 kb on - strand, within ABZR86_RS18920at 216.314 kb on - strand, within ABZR86_RS18920at 216.514 kb on + strand, within ABZR86_RS18920at 216.514 kb on + strand, within ABZR86_RS18920at 216.515 kb on - strand, within ABZR86_RS18920at 216.522 kb on + strand, within ABZR86_RS18920at 216.523 kb on - strand, within ABZR86_RS18920at 216.777 kb on + strandat 216.777 kb on + strandat 216.777 kb on + strandat 216.777 kb on + strandat 216.777 kb on + strandat 216.777 kb on + strandat 216.778 kb on - strandat 216.778 kb on - strandat 216.779 kb on + strandat 216.779 kb on + strandat 216.779 kb on + strandat 216.779 kb on + strandat 216.779 kb on + strandat 216.779 kb on + strandat 216.779 kb on + strandat 216.780 kb on - strandat 216.780 kb on - strandat 216.780 kb on - strandat 216.780 kb on - strandat 216.805 kb on + strandat 216.805 kb on + strandat 216.805 kb on + strandat 216.805 kb on + strandat 216.806 kb on - strandat 216.806 kb on - strandat 216.806 kb on - strandat 217.278 kb on + strand, within ABZR86_RS18925at 217.332 kb on + strand, within ABZR86_RS18925at 217.333 kb on - strand, within ABZR86_RS18925at 217.444 kb on + strand, within ABZR86_RS18925at 217.445 kb on - strand, within ABZR86_RS18925at 217.487 kb on + strand, within ABZR86_RS18925at 217.537 kb on - strand, within ABZR86_RS18925at 217.537 kb on - strand, within ABZR86_RS18925at 217.719 kb on + strandat 217.720 kb on - strandat 217.721 kb on + strandat 217.722 kb on - strandat 217.722 kb on - strandat 217.722 kb on - strandat 217.722 kb on - strandat 217.722 kb on - strandat 217.722 kb on - strandat 217.722 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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215,046 - -2.2
215,072 + +0.3
215,073 - -0.8
215,088 - +0.9
215,088 - -2.5
215,180 + ABZR86_RS18915 0.17 -2.4
215,321 + ABZR86_RS18915 0.33 +0.8
215,321 + ABZR86_RS18915 0.33 +0.2
215,321 + ABZR86_RS18915 0.33 +0.9
215,321 - ABZR86_RS18915 0.33 -0.2
215,322 - ABZR86_RS18915 0.33 -3.4
215,322 - ABZR86_RS18915 0.33 -0.8
215,322 - ABZR86_RS18915 0.33 +0.9
215,363 + ABZR86_RS18915 0.37 -1.5
215,364 - ABZR86_RS18915 0.37 -2.1
215,364 - ABZR86_RS18915 0.37 -0.4
215,528 + ABZR86_RS18915 0.55 -2.7
215,529 - ABZR86_RS18915 0.55 +0.1
215,529 - ABZR86_RS18915 0.55 -0.4
215,591 + ABZR86_RS18915 0.62 +0.5
215,591 + ABZR86_RS18915 0.62 -3.1
215,591 + ABZR86_RS18915 0.62 +0.7
215,828 + ABZR86_RS18915 0.87 +0.1
215,828 + ABZR86_RS18915 0.87 -0.4
215,912 + +0.2
215,912 + -0.8
215,913 - +0.7
215,975 + +0.8
216,037 + -0.3
216,097 + ABZR86_RS18920 0.14 -0.9
216,097 + ABZR86_RS18920 0.14 -1.5
216,098 - ABZR86_RS18920 0.14 +0.0
216,098 - ABZR86_RS18920 0.14 -2.8
216,199 + ABZR86_RS18920 0.28 +0.3
216,199 + ABZR86_RS18920 0.28 -1.2
216,199 + ABZR86_RS18920 0.28 +0.2
216,226 + ABZR86_RS18920 0.31 -0.2
216,259 + ABZR86_RS18920 0.36 -3.4
216,259 + ABZR86_RS18920 0.36 +0.8
216,259 + ABZR86_RS18920 0.36 +1.1
216,259 + ABZR86_RS18920 0.36 -1.7
216,259 + ABZR86_RS18920 0.36 +1.1
216,259 + ABZR86_RS18920 0.36 +0.7
216,259 + ABZR86_RS18920 0.36 -2.7
216,260 - ABZR86_RS18920 0.36 -1.0
216,260 - ABZR86_RS18920 0.36 -0.7
216,260 - ABZR86_RS18920 0.36 +1.7
216,313 + ABZR86_RS18920 0.43 +0.5
216,313 + ABZR86_RS18920 0.43 -0.4
216,314 - ABZR86_RS18920 0.43 +0.2
216,314 - ABZR86_RS18920 0.43 -0.0
216,314 - ABZR86_RS18920 0.43 -0.3
216,514 + ABZR86_RS18920 0.70 -0.7
216,514 + ABZR86_RS18920 0.70 +0.9
216,515 - ABZR86_RS18920 0.70 +0.3
216,522 + ABZR86_RS18920 0.71 +0.3
216,523 - ABZR86_RS18920 0.71 -0.3
216,777 + +0.9
216,777 + +1.0
216,777 + +0.4
216,777 + +0.9
216,777 + -1.8
216,777 + +0.2
216,778 - +0.7
216,778 - +1.1
216,779 + -1.8
216,779 + +0.5
216,779 + +1.7
216,779 + +0.1
216,779 + +0.6
216,779 + +0.8
216,779 + -3.4
216,780 - +0.0
216,780 - -0.8
216,780 - +0.9
216,780 - -0.3
216,805 + -1.9
216,805 + +0.3
216,805 + -1.4
216,805 + -1.0
216,806 - +0.5
216,806 - +1.3
216,806 - -1.0
217,278 + ABZR86_RS18925 0.42 -2.7
217,332 + ABZR86_RS18925 0.48 -0.6
217,333 - ABZR86_RS18925 0.49 +0.9
217,444 + ABZR86_RS18925 0.61 +2.1
217,445 - ABZR86_RS18925 0.61 -0.4
217,487 + ABZR86_RS18925 0.66 -0.0
217,537 - ABZR86_RS18925 0.71 -3.7
217,537 - ABZR86_RS18925 0.71 +0.4
217,719 + -0.7
217,720 - -1.5
217,721 + +0.3
217,722 - -1.1
217,722 - -0.7
217,722 - -3.1
217,722 - -2.8
217,722 - -1.1
217,722 - +0.9
217,722 - -1.3

Or see this region's nucleotide sequence