Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18340 and ABZR86_RS18345 are separated by 120 nucleotides ABZR86_RS18345 and ABZR86_RS18350 are separated by 111 nucleotides ABZR86_RS18350 and ABZR86_RS18355 are separated by 87 nucleotides ABZR86_RS18355 and ABZR86_RS18360 overlap by 1 nucleotides
ABZR86_RS18340: ABZR86_RS18340 - SDR family oxidoreductase, at 90,085 to 90,834
_RS18340
ABZR86_RS18345: ABZR86_RS18345 - TetR/AcrR family transcriptional regulator, at 90,955 to 91,599
_RS18345
ABZR86_RS18350: ABZR86_RS18350 - tRNA dihydrouridine(20/20a) synthase DusA, at 91,711 to 92,694
_RS18350
ABZR86_RS18355: ABZR86_RS18355 - PepSY domain-containing protein, at 92,782 to 93,096
_RS18355
ABZR86_RS18360: ABZR86_RS18360 - response regulator transcription factor, at 93,096 to 93,788
_RS18360
Position (kb) 91
92
93 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 90.828 kb on + strand at 90.828 kb on + strand at 90.829 kb on - strand at 90.852 kb on + strand at 90.852 kb on + strand at 90.852 kb on + strand at 90.852 kb on + strand at 90.852 kb on + strand at 90.853 kb on - strand at 90.853 kb on - strand at 90.853 kb on - strand at 90.853 kb on - strand at 90.907 kb on - strand at 90.912 kb on + strand at 90.912 kb on + strand at 90.912 kb on + strand at 90.912 kb on + strand at 90.912 kb on + strand at 90.913 kb on - strand at 90.913 kb on - strand at 90.913 kb on - strand at 90.913 kb on - strand at 90.913 kb on - strand at 90.913 kb on - strand at 90.937 kb on + strand at 90.937 kb on + strand at 90.937 kb on + strand at 90.937 kb on + strand at 90.938 kb on - strand at 90.938 kb on - strand at 90.938 kb on - strand at 90.938 kb on - strand at 90.938 kb on - strand at 90.940 kb on + strand at 90.940 kb on + strand at 90.941 kb on - strand at 91.126 kb on + strand, within ABZR86_RS18345 at 91.127 kb on - strand, within ABZR86_RS18345 at 91.127 kb on - strand, within ABZR86_RS18345 at 91.127 kb on - strand, within ABZR86_RS18345 at 91.133 kb on - strand, within ABZR86_RS18345 at 91.133 kb on - strand, within ABZR86_RS18345 at 91.143 kb on + strand, within ABZR86_RS18345 at 91.259 kb on + strand, within ABZR86_RS18345 at 91.260 kb on - strand, within ABZR86_RS18345 at 91.260 kb on - strand, within ABZR86_RS18345 at 91.270 kb on + strand, within ABZR86_RS18345 at 91.271 kb on - strand, within ABZR86_RS18345 at 91.465 kb on + strand, within ABZR86_RS18345 at 91.466 kb on - strand, within ABZR86_RS18345 at 91.513 kb on - strand, within ABZR86_RS18345 at 91.555 kb on + strand at 91.556 kb on - strand at 91.556 kb on - strand at 91.698 kb on + strand at 91.699 kb on - strand at 91.699 kb on - strand at 91.699 kb on - strand at 91.703 kb on + strand at 91.704 kb on - strand at 91.704 kb on - strand at 91.822 kb on + strand, within ABZR86_RS18350 at 91.884 kb on + strand, within ABZR86_RS18350 at 91.885 kb on - strand, within ABZR86_RS18350 at 91.885 kb on - strand, within ABZR86_RS18350 at 91.885 kb on - strand, within ABZR86_RS18350 at 91.953 kb on + strand, within ABZR86_RS18350 at 91.953 kb on + strand, within ABZR86_RS18350 at 91.954 kb on - strand, within ABZR86_RS18350 at 91.954 kb on - strand, within ABZR86_RS18350 at 91.954 kb on - strand, within ABZR86_RS18350 at 92.078 kb on + strand, within ABZR86_RS18350 at 92.078 kb on + strand, within ABZR86_RS18350 at 92.078 kb on + strand, within ABZR86_RS18350 at 92.079 kb on - strand, within ABZR86_RS18350 at 92.079 kb on - strand, within ABZR86_RS18350 at 92.079 kb on - strand, within ABZR86_RS18350 at 92.152 kb on + strand, within ABZR86_RS18350 at 92.153 kb on - strand, within ABZR86_RS18350 at 92.153 kb on - strand, within ABZR86_RS18350 at 92.153 kb on - strand, within ABZR86_RS18350 at 92.281 kb on + strand, within ABZR86_RS18350 at 92.282 kb on - strand, within ABZR86_RS18350 at 92.282 kb on - strand, within ABZR86_RS18350 at 92.293 kb on + strand, within ABZR86_RS18350 at 92.293 kb on + strand, within ABZR86_RS18350 at 92.413 kb on + strand, within ABZR86_RS18350 at 92.413 kb on + strand, within ABZR86_RS18350 at 92.425 kb on + strand, within ABZR86_RS18350 at 92.426 kb on - strand, within ABZR86_RS18350 at 92.426 kb on - strand, within ABZR86_RS18350 at 92.426 kb on - strand, within ABZR86_RS18350 at 92.426 kb on - strand, within ABZR86_RS18350 at 92.455 kb on + strand, within ABZR86_RS18350 at 92.507 kb on - strand, within ABZR86_RS18350 at 92.507 kb on - strand, within ABZR86_RS18350 at 92.507 kb on - strand, within ABZR86_RS18350 at 92.573 kb on - strand, within ABZR86_RS18350 at 92.573 kb on - strand, within ABZR86_RS18350 at 92.684 kb on + strand at 92.685 kb on - strand at 92.717 kb on + strand at 92.717 kb on + strand at 92.717 kb on + strand at 92.717 kb on + strand at 92.717 kb on + strand at 92.718 kb on - strand at 92.736 kb on - strand at 92.781 kb on + strand at 92.781 kb on + strand at 92.929 kb on - strand, within ABZR86_RS18355 at 93.081 kb on + strand at 93.112 kb on + strand at 93.208 kb on - strand, within ABZR86_RS18360 at 93.387 kb on + strand, within ABZR86_RS18360 at 93.387 kb on + strand, within ABZR86_RS18360 at 93.387 kb on + strand, within ABZR86_RS18360 at 93.552 kb on + strand, within ABZR86_RS18360 at 93.552 kb on + strand, within ABZR86_RS18360 at 93.552 kb on + strand, within ABZR86_RS18360 at 93.552 kb on + strand, within ABZR86_RS18360 at 93.553 kb on - strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.558 kb on + strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.559 kb on - strand, within ABZR86_RS18360 at 93.573 kb on + strand, within ABZR86_RS18360 at 93.574 kb on - strand, within ABZR86_RS18360 at 93.574 kb on - strand, within ABZR86_RS18360 at 93.574 kb on - strand, within ABZR86_RS18360 at 93.574 kb on - strand, within ABZR86_RS18360 at 93.630 kb on + strand, within ABZR86_RS18360 at 93.630 kb on + strand, within ABZR86_RS18360 at 93.630 kb on + strand, within ABZR86_RS18360 at 93.630 kb on + strand, within ABZR86_RS18360 at 93.631 kb on - strand, within ABZR86_RS18360 at 93.631 kb on - strand, within ABZR86_RS18360 at 93.631 kb on - strand, within ABZR86_RS18360 at 93.631 kb on - strand, within ABZR86_RS18360
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 90,828 + +0.1 90,828 + +1.4 90,829 - -2.3 90,852 + -0.3 90,852 + -1.6 90,852 + +0.8 90,852 + -0.5 90,852 + +1.0 90,853 - -0.8 90,853 - +0.3 90,853 - +0.7 90,853 - +2.2 90,907 - -2.7 90,912 + -0.0 90,912 + -0.9 90,912 + +1.1 90,912 + +0.5 90,912 + +0.7 90,913 - -0.4 90,913 - +0.5 90,913 - -0.2 90,913 - -0.1 90,913 - -0.9 90,913 - -0.0 90,937 + +0.9 90,937 + +0.2 90,937 + -1.6 90,937 + -2.3 90,938 - +0.8 90,938 - +0.3 90,938 - -0.1 90,938 - +1.2 90,938 - +0.1 90,940 + +1.6 90,940 + +1.5 90,941 - -1.3 91,126 + ABZR86_RS18345 0.27 -0.4 91,127 - ABZR86_RS18345 0.27 +1.5 91,127 - ABZR86_RS18345 0.27 -0.6 91,127 - ABZR86_RS18345 0.27 +1.2 91,133 - ABZR86_RS18345 0.28 +0.4 91,133 - ABZR86_RS18345 0.28 +0.2 91,143 + ABZR86_RS18345 0.29 +0.9 91,259 + ABZR86_RS18345 0.47 +0.0 91,260 - ABZR86_RS18345 0.47 -0.0 91,260 - ABZR86_RS18345 0.47 +0.1 91,270 + ABZR86_RS18345 0.49 +1.1 91,271 - ABZR86_RS18345 0.49 +0.9 91,465 + ABZR86_RS18345 0.79 -0.5 91,466 - ABZR86_RS18345 0.79 -3.5 91,513 - ABZR86_RS18345 0.87 -0.4 91,555 + +0.5 91,556 - +0.1 91,556 - +0.7 91,698 + +1.5 91,699 - -0.8 91,699 - -0.2 91,699 - +1.1 91,703 + +0.1 91,704 - -0.1 91,704 - -0.2 91,822 + ABZR86_RS18350 0.11 -2.0 91,884 + ABZR86_RS18350 0.18 +0.6 91,885 - ABZR86_RS18350 0.18 -0.6 91,885 - ABZR86_RS18350 0.18 -1.3 91,885 - ABZR86_RS18350 0.18 -1.6 91,953 + ABZR86_RS18350 0.25 +1.3 91,953 + ABZR86_RS18350 0.25 +0.8 91,954 - ABZR86_RS18350 0.25 +0.0 91,954 - ABZR86_RS18350 0.25 +1.0 91,954 - ABZR86_RS18350 0.25 -0.5 92,078 + ABZR86_RS18350 0.37 +1.5 92,078 + ABZR86_RS18350 0.37 +0.7 92,078 + ABZR86_RS18350 0.37 +0.3 92,079 - ABZR86_RS18350 0.37 -3.1 92,079 - ABZR86_RS18350 0.37 +1.2 92,079 - ABZR86_RS18350 0.37 +2.0 92,152 + ABZR86_RS18350 0.45 -2.5 92,153 - ABZR86_RS18350 0.45 +0.7 92,153 - ABZR86_RS18350 0.45 +0.4 92,153 - ABZR86_RS18350 0.45 -2.3 92,281 + ABZR86_RS18350 0.58 -1.9 92,282 - ABZR86_RS18350 0.58 +1.6 92,282 - ABZR86_RS18350 0.58 -1.7 92,293 + ABZR86_RS18350 0.59 +1.2 92,293 + ABZR86_RS18350 0.59 +0.9 92,413 + ABZR86_RS18350 0.71 -2.4 92,413 + ABZR86_RS18350 0.71 +0.2 92,425 + ABZR86_RS18350 0.73 -0.2 92,426 - ABZR86_RS18350 0.73 +2.1 92,426 - ABZR86_RS18350 0.73 -2.2 92,426 - ABZR86_RS18350 0.73 -0.4 92,426 - ABZR86_RS18350 0.73 +1.5 92,455 + ABZR86_RS18350 0.76 -0.3 92,507 - ABZR86_RS18350 0.81 -0.4 92,507 - ABZR86_RS18350 0.81 +0.2 92,507 - ABZR86_RS18350 0.81 +0.6 92,573 - ABZR86_RS18350 0.88 -0.3 92,573 - ABZR86_RS18350 0.88 +1.5 92,684 + -2.4 92,685 - -0.2 92,717 + -1.1 92,717 + -0.1 92,717 + -0.1 92,717 + -0.2 92,717 + -0.2 92,718 - +2.1 92,736 - +1.5 92,781 + -1.6 92,781 + +1.3 92,929 - ABZR86_RS18355 0.47 -0.2 93,081 + +2.7 93,112 + +0.2 93,208 - ABZR86_RS18360 0.16 -2.5 93,387 + ABZR86_RS18360 0.42 -3.3 93,387 + ABZR86_RS18360 0.42 -1.0 93,387 + ABZR86_RS18360 0.42 -0.5 93,552 + ABZR86_RS18360 0.66 -2.9 93,552 + ABZR86_RS18360 0.66 +0.1 93,552 + ABZR86_RS18360 0.66 -4.3 93,552 + ABZR86_RS18360 0.66 -2.6 93,553 - ABZR86_RS18360 0.66 -0.5 93,558 + ABZR86_RS18360 0.67 -2.6 93,558 + ABZR86_RS18360 0.67 -1.2 93,558 + ABZR86_RS18360 0.67 +1.8 93,558 + ABZR86_RS18360 0.67 +0.5 93,558 + ABZR86_RS18360 0.67 -0.5 93,558 + ABZR86_RS18360 0.67 +0.8 93,558 + ABZR86_RS18360 0.67 -0.4 93,558 + ABZR86_RS18360 0.67 -2.7 93,558 + ABZR86_RS18360 0.67 +0.7 93,558 + ABZR86_RS18360 0.67 +0.9 93,558 + ABZR86_RS18360 0.67 -1.8 93,559 - ABZR86_RS18360 0.67 -1.2 93,559 - ABZR86_RS18360 0.67 -3.3 93,559 - ABZR86_RS18360 0.67 -0.0 93,559 - ABZR86_RS18360 0.67 -3.4 93,559 - ABZR86_RS18360 0.67 -3.2 93,559 - ABZR86_RS18360 0.67 -0.7 93,559 - ABZR86_RS18360 0.67 -0.7 93,559 - ABZR86_RS18360 0.67 -1.7 93,559 - ABZR86_RS18360 0.67 -2.8 93,559 - ABZR86_RS18360 0.67 +0.5 93,559 - ABZR86_RS18360 0.67 -3.3 93,573 + ABZR86_RS18360 0.69 -0.1 93,574 - ABZR86_RS18360 0.69 -0.9 93,574 - ABZR86_RS18360 0.69 -3.0 93,574 - ABZR86_RS18360 0.69 -3.3 93,574 - ABZR86_RS18360 0.69 +0.8 93,630 + ABZR86_RS18360 0.77 +0.5 93,630 + ABZR86_RS18360 0.77 -0.1 93,630 + ABZR86_RS18360 0.77 +0.3 93,630 + ABZR86_RS18360 0.77 +0.5 93,631 - ABZR86_RS18360 0.77 -0.8 93,631 - ABZR86_RS18360 0.77 -2.4 93,631 - ABZR86_RS18360 0.77 -1.4 93,631 - ABZR86_RS18360 0.77 -3.4
Or see this region's nucleotide sequence