Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17690 and ABZR86_RS17695 are separated by 300 nucleotides ABZR86_RS17695 and ABZR86_RS17700 are separated by 71 nucleotides ABZR86_RS17700 and ABZR86_RS17705 are separated by 23 nucleotides
ABZR86_RS17690: ABZR86_RS17690 - protease pro-enzyme activation domain-containing protein, at 3,990,691 to 3,992,493
_RS17690
ABZR86_RS17695: ABZR86_RS17695 - MerR family DNA-binding protein, at 3,992,794 to 3,993,222
_RS17695
ABZR86_RS17700: ABZR86_RS17700 - oxidoreductase, at 3,993,294 to 3,994,127
_RS17700
ABZR86_RS17705: ABZR86_RS17705 - ATP-binding protein, at 3,994,151 to 3,995,203
_RS17705
Position (kb)
3993
3994
3995 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3992.349 kb on - strand at 3992.349 kb on - strand at 3992.512 kb on + strand at 3992.645 kb on - strand at 3992.645 kb on - strand at 3992.711 kb on + strand at 3993.042 kb on + strand, within ABZR86_RS17695 at 3993.165 kb on - strand, within ABZR86_RS17695 at 3993.308 kb on - strand at 3993.372 kb on + strand at 3993.372 kb on + strand at 3993.372 kb on + strand at 3993.373 kb on - strand at 3993.373 kb on - strand at 3993.373 kb on - strand at 3993.381 kb on + strand, within ABZR86_RS17700 at 3993.540 kb on + strand, within ABZR86_RS17700 at 3993.540 kb on + strand, within ABZR86_RS17700 at 3993.550 kb on - strand, within ABZR86_RS17700 at 3993.550 kb on - strand, within ABZR86_RS17700 at 3993.627 kb on - strand, within ABZR86_RS17700 at 3993.727 kb on - strand, within ABZR86_RS17700 at 3994.153 kb on - strand at 3994.153 kb on - strand at 3994.808 kb on + strand, within ABZR86_RS17705 at 3994.808 kb on + strand, within ABZR86_RS17705 at 3994.986 kb on + strand, within ABZR86_RS17705 at 3994.987 kb on - strand, within ABZR86_RS17705 at 3995.099 kb on - strand at 3995.099 kb on - strand at 3995.113 kb on - strand at 3995.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 3,992,349 - +0.6 3,992,349 - +0.2 3,992,512 + -0.2 3,992,645 - -0.4 3,992,645 - +1.4 3,992,711 + -0.9 3,993,042 + ABZR86_RS17695 0.58 +0.5 3,993,165 - ABZR86_RS17695 0.86 -1.1 3,993,308 - +0.9 3,993,372 + -1.5 3,993,372 + +0.4 3,993,372 + +0.2 3,993,373 - +1.7 3,993,373 - -0.3 3,993,373 - +0.4 3,993,381 + ABZR86_RS17700 0.10 +1.4 3,993,540 + ABZR86_RS17700 0.29 +0.7 3,993,540 + ABZR86_RS17700 0.29 -0.0 3,993,550 - ABZR86_RS17700 0.31 -1.0 3,993,550 - ABZR86_RS17700 0.31 +1.5 3,993,627 - ABZR86_RS17700 0.40 +2.5 3,993,727 - ABZR86_RS17700 0.52 -0.5 3,994,153 - -0.0 3,994,153 - +0.9 3,994,808 + ABZR86_RS17705 0.62 -0.1 3,994,808 + ABZR86_RS17705 0.62 +1.1 3,994,986 + ABZR86_RS17705 0.79 +0.8 3,994,987 - ABZR86_RS17705 0.79 -0.8 3,995,099 - -3.0 3,995,099 - -0.5 3,995,113 - +1.5 3,995,113 - -3.4
Or see this region's nucleotide sequence