Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10580 and ABZR86_RS10585 are separated by 21 nucleotides ABZR86_RS10585 and ABZR86_RS10590 are separated by 10 nucleotides
ABZR86_RS10580: ABZR86_RS10580 - ABC transporter permease, at 2,353,468 to 2,354,784
_RS10580
ABZR86_RS10585: ABZR86_RS10585 - FtsX-like permease family protein, at 2,354,806 to 2,356,029
_RS10585
ABZR86_RS10590: ABZR86_RS10590 - ABC transporter permease, at 2,356,040 to 2,357,347
_RS10590
Position (kb)
2354
2355
2356
2357 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2353.855 kb on + strand, within ABZR86_RS10580 at 2353.855 kb on + strand, within ABZR86_RS10580 at 2353.856 kb on - strand, within ABZR86_RS10580 at 2353.955 kb on + strand, within ABZR86_RS10580 at 2353.976 kb on + strand, within ABZR86_RS10580 at 2353.977 kb on - strand, within ABZR86_RS10580 at 2354.081 kb on + strand, within ABZR86_RS10580 at 2354.088 kb on - strand, within ABZR86_RS10580 at 2354.201 kb on + strand, within ABZR86_RS10580 at 2354.202 kb on - strand, within ABZR86_RS10580 at 2354.382 kb on - strand, within ABZR86_RS10580 at 2354.576 kb on + strand, within ABZR86_RS10580 at 2354.577 kb on - strand, within ABZR86_RS10580 at 2354.612 kb on + strand, within ABZR86_RS10580 at 2354.613 kb on - strand, within ABZR86_RS10580 at 2354.772 kb on - strand at 2355.407 kb on - strand, within ABZR86_RS10585 at 2355.662 kb on + strand, within ABZR86_RS10585 at 2355.662 kb on + strand, within ABZR86_RS10585 at 2355.663 kb on - strand, within ABZR86_RS10585 at 2355.663 kb on - strand, within ABZR86_RS10585 at 2355.663 kb on - strand, within ABZR86_RS10585 at 2355.717 kb on + strand, within ABZR86_RS10585 at 2355.718 kb on - strand, within ABZR86_RS10585 at 2355.742 kb on + strand, within ABZR86_RS10585 at 2355.742 kb on + strand, within ABZR86_RS10585 at 2355.742 kb on + strand, within ABZR86_RS10585 at 2355.743 kb on - strand, within ABZR86_RS10585 at 2356.042 kb on - strand at 2356.180 kb on - strand, within ABZR86_RS10590 at 2356.238 kb on + strand, within ABZR86_RS10590 at 2356.388 kb on + strand, within ABZR86_RS10590 at 2356.388 kb on + strand, within ABZR86_RS10590 at 2356.389 kb on - strand, within ABZR86_RS10590 at 2356.389 kb on - strand, within ABZR86_RS10590 at 2356.533 kb on + strand, within ABZR86_RS10590 at 2356.534 kb on - strand, within ABZR86_RS10590 at 2356.534 kb on - strand, within ABZR86_RS10590 at 2356.554 kb on + strand, within ABZR86_RS10590 at 2356.737 kb on + strand, within ABZR86_RS10590 at 2356.738 kb on - strand, within ABZR86_RS10590 at 2356.758 kb on + strand, within ABZR86_RS10590 at 2356.939 kb on - strand, within ABZR86_RS10590 at 2356.983 kb on + strand, within ABZR86_RS10590
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 2,353,855 + ABZR86_RS10580 0.29 +0.7 2,353,855 + ABZR86_RS10580 0.29 +0.3 2,353,856 - ABZR86_RS10580 0.29 -1.5 2,353,955 + ABZR86_RS10580 0.37 -2.2 2,353,976 + ABZR86_RS10580 0.39 +0.6 2,353,977 - ABZR86_RS10580 0.39 -1.0 2,354,081 + ABZR86_RS10580 0.47 +0.8 2,354,088 - ABZR86_RS10580 0.47 +2.8 2,354,201 + ABZR86_RS10580 0.56 +0.9 2,354,202 - ABZR86_RS10580 0.56 +2.0 2,354,382 - ABZR86_RS10580 0.69 -0.4 2,354,576 + ABZR86_RS10580 0.84 -0.7 2,354,577 - ABZR86_RS10580 0.84 -1.1 2,354,612 + ABZR86_RS10580 0.87 +1.3 2,354,613 - ABZR86_RS10580 0.87 +0.5 2,354,772 - +1.1 2,355,407 - ABZR86_RS10585 0.49 +0.2 2,355,662 + ABZR86_RS10585 0.70 -0.2 2,355,662 + ABZR86_RS10585 0.70 -2.6 2,355,663 - ABZR86_RS10585 0.70 -0.6 2,355,663 - ABZR86_RS10585 0.70 +2.2 2,355,663 - ABZR86_RS10585 0.70 +0.1 2,355,717 + ABZR86_RS10585 0.74 -0.4 2,355,718 - ABZR86_RS10585 0.75 -2.8 2,355,742 + ABZR86_RS10585 0.76 +0.0 2,355,742 + ABZR86_RS10585 0.76 +0.9 2,355,742 + ABZR86_RS10585 0.76 -1.1 2,355,743 - ABZR86_RS10585 0.77 +0.8 2,356,042 - +0.4 2,356,180 - ABZR86_RS10590 0.11 -0.2 2,356,238 + ABZR86_RS10590 0.15 +1.7 2,356,388 + ABZR86_RS10590 0.27 -0.4 2,356,388 + ABZR86_RS10590 0.27 +1.1 2,356,389 - ABZR86_RS10590 0.27 +0.8 2,356,389 - ABZR86_RS10590 0.27 -0.2 2,356,533 + ABZR86_RS10590 0.38 +1.5 2,356,534 - ABZR86_RS10590 0.38 -0.8 2,356,534 - ABZR86_RS10590 0.38 +1.0 2,356,554 + ABZR86_RS10590 0.39 +0.9 2,356,737 + ABZR86_RS10590 0.53 +0.2 2,356,738 - ABZR86_RS10590 0.53 -0.6 2,356,758 + ABZR86_RS10590 0.55 -0.2 2,356,939 - ABZR86_RS10590 0.69 -0.5 2,356,983 + ABZR86_RS10590 0.72 -0.2
Or see this region's nucleotide sequence