Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06795

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS06790 and ABZR86_RS06795 are separated by 25 nucleotidesABZR86_RS06795 and ABZR86_RS06800 are separated by 2 nucleotidesABZR86_RS06800 and ABZR86_RS06805 are separated by 113 nucleotides ABZR86_RS06790: ABZR86_RS06790 - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 1,493,064 to 1,494,335 _RS06790 ABZR86_RS06795: ABZR86_RS06795 - GNAT family N-acetyltransferase, at 1,494,361 to 1,494,957 _RS06795 ABZR86_RS06800: ABZR86_RS06800 - ketosteroid isomerase-related protein, at 1,494,960 to 1,495,364 _RS06800 ABZR86_RS06805: ABZR86_RS06805 - acetyl-CoA hydrolase/transferase C-terminal domain-containing protein, at 1,495,478 to 1,497,427 _RS06805 Position (kb) 1494 1495Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1494.467 kb on + strand, within ABZR86_RS06795at 1494.467 kb on + strand, within ABZR86_RS06795at 1494.467 kb on + strand, within ABZR86_RS06795at 1494.635 kb on + strand, within ABZR86_RS06795at 1494.665 kb on + strand, within ABZR86_RS06795at 1494.665 kb on + strand, within ABZR86_RS06795at 1494.784 kb on + strand, within ABZR86_RS06795at 1494.785 kb on - strand, within ABZR86_RS06795at 1494.785 kb on - strand, within ABZR86_RS06795at 1494.785 kb on - strand, within ABZR86_RS06795at 1494.813 kb on - strand, within ABZR86_RS06795at 1494.824 kb on + strand, within ABZR86_RS06795at 1494.825 kb on - strand, within ABZR86_RS06795at 1494.836 kb on + strand, within ABZR86_RS06795at 1494.837 kb on - strand, within ABZR86_RS06795at 1494.854 kb on + strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.855 kb on - strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.856 kb on + strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.857 kb on - strand, within ABZR86_RS06795at 1494.860 kb on + strand, within ABZR86_RS06795at 1494.861 kb on - strand, within ABZR86_RS06795at 1494.861 kb on - strand, within ABZR86_RS06795at 1494.861 kb on - strand, within ABZR86_RS06795at 1494.861 kb on - strand, within ABZR86_RS06795at 1494.912 kb on - strandat 1494.997 kb on + strandat 1494.997 kb on + strandat 1494.997 kb on + strandat 1494.997 kb on + strandat 1494.997 kb on + strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1494.998 kb on - strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.000 kb on + strandat 1495.001 kb on - strand, within ABZR86_RS06800at 1495.001 kb on - strand, within ABZR86_RS06800at 1495.001 kb on - strand, within ABZR86_RS06800at 1495.001 kb on - strand, within ABZR86_RS06800at 1495.063 kb on + strand, within ABZR86_RS06800at 1495.063 kb on + strand, within ABZR86_RS06800at 1495.063 kb on + strand, within ABZR86_RS06800at 1495.063 kb on + strand, within ABZR86_RS06800at 1495.064 kb on - strand, within ABZR86_RS06800at 1495.064 kb on - strand, within ABZR86_RS06800at 1495.108 kb on + strand, within ABZR86_RS06800at 1495.126 kb on + strand, within ABZR86_RS06800at 1495.193 kb on - strand, within ABZR86_RS06800at 1495.330 kb on + strandat 1495.330 kb on + strandat 1495.331 kb on - strandat 1495.331 kb on - strandat 1495.331 kb on - strandat 1495.402 kb on - strandat 1495.402 kb on - strandat 1495.408 kb on + strandat 1495.409 kb on - strandat 1495.944 kb on + strand, within ABZR86_RS06805at 1495.945 kb on - strand, within ABZR86_RS06805

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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1,494,467 + ABZR86_RS06795 0.18 -0.5
1,494,467 + ABZR86_RS06795 0.18 +1.3
1,494,467 + ABZR86_RS06795 0.18 +0.6
1,494,635 + ABZR86_RS06795 0.46 -3.3
1,494,665 + ABZR86_RS06795 0.51 +0.1
1,494,665 + ABZR86_RS06795 0.51 +1.0
1,494,784 + ABZR86_RS06795 0.71 -0.3
1,494,785 - ABZR86_RS06795 0.71 +1.1
1,494,785 - ABZR86_RS06795 0.71 +0.4
1,494,785 - ABZR86_RS06795 0.71 +1.6
1,494,813 - ABZR86_RS06795 0.76 +0.4
1,494,824 + ABZR86_RS06795 0.78 +0.8
1,494,825 - ABZR86_RS06795 0.78 +0.4
1,494,836 + ABZR86_RS06795 0.80 -1.2
1,494,837 - ABZR86_RS06795 0.80 +0.3
1,494,854 + ABZR86_RS06795 0.83 +0.6
1,494,855 - ABZR86_RS06795 0.83 +1.4
1,494,855 - ABZR86_RS06795 0.83 +0.3
1,494,855 - ABZR86_RS06795 0.83 +0.1
1,494,855 - ABZR86_RS06795 0.83 -0.6
1,494,855 - ABZR86_RS06795 0.83 -0.2
1,494,855 - ABZR86_RS06795 0.83 -4.0
1,494,855 - ABZR86_RS06795 0.83 -2.6
1,494,855 - ABZR86_RS06795 0.83 +0.4
1,494,856 + ABZR86_RS06795 0.83 -0.5
1,494,856 + ABZR86_RS06795 0.83 -3.8
1,494,856 + ABZR86_RS06795 0.83 -1.5
1,494,856 + ABZR86_RS06795 0.83 +0.5
1,494,856 + ABZR86_RS06795 0.83 +0.6
1,494,856 + ABZR86_RS06795 0.83 +0.0
1,494,856 + ABZR86_RS06795 0.83 +0.5
1,494,856 + ABZR86_RS06795 0.83 +0.1
1,494,856 + ABZR86_RS06795 0.83 -2.9
1,494,857 - ABZR86_RS06795 0.83 +0.4
1,494,857 - ABZR86_RS06795 0.83 -2.6
1,494,857 - ABZR86_RS06795 0.83 -1.4
1,494,857 - ABZR86_RS06795 0.83 -0.5
1,494,857 - ABZR86_RS06795 0.83 -0.2
1,494,857 - ABZR86_RS06795 0.83 +1.2
1,494,857 - ABZR86_RS06795 0.83 +0.6
1,494,857 - ABZR86_RS06795 0.83 +2.2
1,494,857 - ABZR86_RS06795 0.83 -0.1
1,494,857 - ABZR86_RS06795 0.83 -2.2
1,494,857 - ABZR86_RS06795 0.83 -0.3
1,494,860 + ABZR86_RS06795 0.84 -0.9
1,494,861 - ABZR86_RS06795 0.84 -2.1
1,494,861 - ABZR86_RS06795 0.84 +2.0
1,494,861 - ABZR86_RS06795 0.84 -1.8
1,494,861 - ABZR86_RS06795 0.84 -0.7
1,494,912 - -0.6
1,494,997 + +1.4
1,494,997 + -2.8
1,494,997 + -1.9
1,494,997 + -2.8
1,494,997 + +0.2
1,494,998 - -2.0
1,494,998 - -1.7
1,494,998 - -0.8
1,494,998 - -4.2
1,494,998 - +1.3
1,494,998 - -1.6
1,494,998 - -1.6
1,494,998 - -0.5
1,494,998 - +0.6
1,495,000 + -2.8
1,495,000 + -3.5
1,495,000 + +0.6
1,495,000 + -0.9
1,495,000 + +1.8
1,495,000 + +0.7
1,495,000 + -0.5
1,495,000 + -1.7
1,495,001 - ABZR86_RS06800 0.10 -1.1
1,495,001 - ABZR86_RS06800 0.10 -0.1
1,495,001 - ABZR86_RS06800 0.10 -1.1
1,495,001 - ABZR86_RS06800 0.10 -0.2
1,495,063 + ABZR86_RS06800 0.25 -3.2
1,495,063 + ABZR86_RS06800 0.25 -0.1
1,495,063 + ABZR86_RS06800 0.25 +0.3
1,495,063 + ABZR86_RS06800 0.25 -1.1
1,495,064 - ABZR86_RS06800 0.26 +0.3
1,495,064 - ABZR86_RS06800 0.26 +0.8
1,495,108 + ABZR86_RS06800 0.37 -0.1
1,495,126 + ABZR86_RS06800 0.41 +0.7
1,495,193 - ABZR86_RS06800 0.58 -0.7
1,495,330 + -0.9
1,495,330 + +0.8
1,495,331 - +1.0
1,495,331 - -1.4
1,495,331 - -1.5
1,495,402 - -0.0
1,495,402 - -1.3
1,495,408 + +0.9
1,495,409 - -0.1
1,495,944 + ABZR86_RS06805 0.24 +1.1
1,495,945 - ABZR86_RS06805 0.24 +1.5

Or see this region's nucleotide sequence