Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS04230

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS04220 and ABZR86_RS04225 are separated by 92 nucleotidesABZR86_RS04225 and ABZR86_RS04230 are separated by 512 nucleotidesABZR86_RS04230 and ABZR86_RS04235 are separated by 13 nucleotides ABZR86_RS04220: ABZR86_RS04220 - amino acid adenylation domain-containing protein, at 947,181 to 950,255 _RS04220 ABZR86_RS04225: ABZR86_RS04225 - MbtH family protein, at 950,348 to 950,566 _RS04225 ABZR86_RS04230: ABZR86_RS04230 - amidohydrolase family protein, at 951,079 to 952,584 _RS04230 ABZR86_RS04235: ABZR86_RS04235 - LysR family transcriptional regulator, at 952,598 to 953,491 _RS04235 Position (kb) 951 952 953Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 950.101 kb on + strandat 950.227 kb on + strandat 950.227 kb on + strandat 950.227 kb on + strandat 950.228 kb on - strandat 950.349 kb on + strandat 950.395 kb on + strand, within ABZR86_RS04225at 950.395 kb on + strand, within ABZR86_RS04225at 950.395 kb on + strand, within ABZR86_RS04225at 950.396 kb on - strand, within ABZR86_RS04225at 950.407 kb on + strand, within ABZR86_RS04225at 950.407 kb on + strand, within ABZR86_RS04225at 950.408 kb on - strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.418 kb on + strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.419 kb on - strand, within ABZR86_RS04225at 950.617 kb on + strandat 950.617 kb on + strandat 950.719 kb on - strandat 950.740 kb on + strandat 950.741 kb on - strandat 950.743 kb on + strandat 950.743 kb on + strandat 950.743 kb on + strandat 950.743 kb on + strandat 950.743 kb on + strandat 950.744 kb on - strandat 950.744 kb on - strandat 950.744 kb on - strandat 950.765 kb on + strandat 950.765 kb on + strandat 950.766 kb on - strandat 950.826 kb on + strandat 950.826 kb on + strandat 950.826 kb on + strandat 950.826 kb on + strandat 950.827 kb on - strandat 950.878 kb on + strandat 950.911 kb on - strandat 950.911 kb on - strandat 950.962 kb on + strandat 950.963 kb on - strandat 951.090 kb on + strandat 951.090 kb on + strandat 951.090 kb on + strandat 951.090 kb on + strandat 951.093 kb on + strandat 951.093 kb on + strandat 951.093 kb on + strandat 951.093 kb on + strandat 951.094 kb on - strandat 951.094 kb on - strandat 951.147 kb on + strandat 951.184 kb on + strandat 951.185 kb on - strandat 951.409 kb on + strand, within ABZR86_RS04230at 951.475 kb on + strand, within ABZR86_RS04230at 951.475 kb on + strand, within ABZR86_RS04230at 951.476 kb on - strand, within ABZR86_RS04230at 951.498 kb on + strand, within ABZR86_RS04230at 951.499 kb on - strand, within ABZR86_RS04230at 951.499 kb on - strand, within ABZR86_RS04230at 951.499 kb on - strand, within ABZR86_RS04230at 951.504 kb on + strand, within ABZR86_RS04230at 951.505 kb on - strand, within ABZR86_RS04230at 951.515 kb on + strand, within ABZR86_RS04230at 951.516 kb on - strand, within ABZR86_RS04230at 951.516 kb on - strand, within ABZR86_RS04230at 951.516 kb on - strand, within ABZR86_RS04230at 951.516 kb on - strand, within ABZR86_RS04230at 951.760 kb on + strand, within ABZR86_RS04230at 951.761 kb on - strand, within ABZR86_RS04230at 951.761 kb on - strand, within ABZR86_RS04230at 951.822 kb on - strand, within ABZR86_RS04230at 951.891 kb on + strand, within ABZR86_RS04230at 951.993 kb on - strand, within ABZR86_RS04230at 951.993 kb on - strand, within ABZR86_RS04230at 951.993 kb on - strand, within ABZR86_RS04230at 951.996 kb on - strand, within ABZR86_RS04230at 951.996 kb on - strand, within ABZR86_RS04230at 951.996 kb on - strand, within ABZR86_RS04230at 952.000 kb on - strand, within ABZR86_RS04230at 952.000 kb on - strand, within ABZR86_RS04230at 952.000 kb on - strand, within ABZR86_RS04230at 952.012 kb on + strand, within ABZR86_RS04230at 952.097 kb on + strand, within ABZR86_RS04230at 952.097 kb on + strand, within ABZR86_RS04230at 952.411 kb on + strand, within ABZR86_RS04230at 952.411 kb on + strand, within ABZR86_RS04230at 952.411 kb on + strand, within ABZR86_RS04230at 952.411 kb on + strand, within ABZR86_RS04230at 952.412 kb on - strand, within ABZR86_RS04230at 952.412 kb on - strand, within ABZR86_RS04230at 952.429 kb on - strand, within ABZR86_RS04230at 952.429 kb on - strand, within ABZR86_RS04230at 952.609 kb on + strandat 952.609 kb on + strandat 952.609 kb on + strandat 952.700 kb on + strand, within ABZR86_RS04235at 952.700 kb on + strand, within ABZR86_RS04235at 952.700 kb on + strand, within ABZR86_RS04235at 952.701 kb on - strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.707 kb on + strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.708 kb on - strand, within ABZR86_RS04235at 952.710 kb on - strand, within ABZR86_RS04235at 952.710 kb on - strand, within ABZR86_RS04235at 952.710 kb on - strand, within ABZR86_RS04235at 952.710 kb on - strand, within ABZR86_RS04235at 952.710 kb on - strand, within ABZR86_RS04235at 952.710 kb on - strand, within ABZR86_RS04235at 952.716 kb on - strand, within ABZR86_RS04235at 952.716 kb on - strand, within ABZR86_RS04235at 952.929 kb on - strand, within ABZR86_RS04235at 952.974 kb on + strand, within ABZR86_RS04235at 952.986 kb on + strand, within ABZR86_RS04235at 952.986 kb on + strand, within ABZR86_RS04235at 952.986 kb on + strand, within ABZR86_RS04235at 952.986 kb on + strand, within ABZR86_RS04235at 952.987 kb on - strand, within ABZR86_RS04235at 952.987 kb on - strand, within ABZR86_RS04235at 953.118 kb on + strand, within ABZR86_RS04235at 953.118 kb on + strand, within ABZR86_RS04235at 953.118 kb on + strand, within ABZR86_RS04235at 953.119 kb on - strand, within ABZR86_RS04235at 953.320 kb on + strand, within ABZR86_RS04235at 953.321 kb on - strand, within ABZR86_RS04235at 953.338 kb on + strand, within ABZR86_RS04235at 953.339 kb on - strand, within ABZR86_RS04235at 953.462 kb on + strandat 953.463 kb on - strandat 953.463 kb on - strandat 953.473 kb on + strandat 953.474 kb on + strandat 953.474 kb on + strandat 953.475 kb on - strandat 953.582 kb on + strandat 953.582 kb on + strandat 953.583 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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950,101 + +0.1
950,227 + +0.5
950,227 + -0.0
950,227 + +1.1
950,228 - +0.5
950,349 + +0.1
950,395 + ABZR86_RS04225 0.21 -0.4
950,395 + ABZR86_RS04225 0.21 +0.4
950,395 + ABZR86_RS04225 0.21 +0.1
950,396 - ABZR86_RS04225 0.22 +0.4
950,407 + ABZR86_RS04225 0.27 -1.6
950,407 + ABZR86_RS04225 0.27 -2.6
950,408 - ABZR86_RS04225 0.27 -3.1
950,418 + ABZR86_RS04225 0.32 -0.4
950,418 + ABZR86_RS04225 0.32 -1.3
950,418 + ABZR86_RS04225 0.32 -1.0
950,418 + ABZR86_RS04225 0.32 +0.9
950,418 + ABZR86_RS04225 0.32 -3.8
950,418 + ABZR86_RS04225 0.32 +2.7
950,418 + ABZR86_RS04225 0.32 -0.7
950,418 + ABZR86_RS04225 0.32 +0.8
950,419 - ABZR86_RS04225 0.32 -0.2
950,419 - ABZR86_RS04225 0.32 +2.7
950,419 - ABZR86_RS04225 0.32 +0.8
950,419 - ABZR86_RS04225 0.32 +0.3
950,419 - ABZR86_RS04225 0.32 +0.9
950,419 - ABZR86_RS04225 0.32 -0.9
950,419 - ABZR86_RS04225 0.32 -1.7
950,617 + +0.5
950,617 + -0.7
950,719 - -0.4
950,740 + -0.4
950,741 - +0.9
950,743 + +0.8
950,743 + -1.1
950,743 + -2.5
950,743 + +0.8
950,743 + -1.7
950,744 - +0.1
950,744 - -0.5
950,744 - -0.0
950,765 + +2.4
950,765 + -3.6
950,766 - +0.7
950,826 + +1.1
950,826 + -0.6
950,826 + -0.0
950,826 + -1.2
950,827 - +0.3
950,878 + -0.1
950,911 - -1.0
950,911 - +1.3
950,962 + -1.7
950,963 - -1.3
951,090 + +1.3
951,090 + -1.8
951,090 + -0.1
951,090 + -2.0
951,093 + -0.7
951,093 + +1.4
951,093 + -1.2
951,093 + +1.2
951,094 - -3.6
951,094 - +1.0
951,147 + -0.4
951,184 + +1.1
951,185 - +1.6
951,409 + ABZR86_RS04230 0.22 +0.0
951,475 + ABZR86_RS04230 0.26 +0.7
951,475 + ABZR86_RS04230 0.26 +0.2
951,476 - ABZR86_RS04230 0.26 +0.7
951,498 + ABZR86_RS04230 0.28 -1.3
951,499 - ABZR86_RS04230 0.28 +0.3
951,499 - ABZR86_RS04230 0.28 -2.4
951,499 - ABZR86_RS04230 0.28 -0.4
951,504 + ABZR86_RS04230 0.28 -0.8
951,505 - ABZR86_RS04230 0.28 +0.5
951,515 + ABZR86_RS04230 0.29 -0.7
951,516 - ABZR86_RS04230 0.29 -1.1
951,516 - ABZR86_RS04230 0.29 -0.5
951,516 - ABZR86_RS04230 0.29 -0.7
951,516 - ABZR86_RS04230 0.29 -2.3
951,760 + ABZR86_RS04230 0.45 -3.5
951,761 - ABZR86_RS04230 0.45 +0.5
951,761 - ABZR86_RS04230 0.45 +0.5
951,822 - ABZR86_RS04230 0.49 -1.2
951,891 + ABZR86_RS04230 0.54 +0.8
951,993 - ABZR86_RS04230 0.61 -0.7
951,993 - ABZR86_RS04230 0.61 +0.9
951,993 - ABZR86_RS04230 0.61 +2.9
951,996 - ABZR86_RS04230 0.61 -0.7
951,996 - ABZR86_RS04230 0.61 -0.1
951,996 - ABZR86_RS04230 0.61 -0.6
952,000 - ABZR86_RS04230 0.61 -2.2
952,000 - ABZR86_RS04230 0.61 -3.9
952,000 - ABZR86_RS04230 0.61 +0.5
952,012 + ABZR86_RS04230 0.62 +1.5
952,097 + ABZR86_RS04230 0.68 -0.4
952,097 + ABZR86_RS04230 0.68 +1.4
952,411 + ABZR86_RS04230 0.88 -2.4
952,411 + ABZR86_RS04230 0.88 +1.9
952,411 + ABZR86_RS04230 0.88 -0.6
952,411 + ABZR86_RS04230 0.88 +1.6
952,412 - ABZR86_RS04230 0.89 +1.1
952,412 - ABZR86_RS04230 0.89 -1.2
952,429 - ABZR86_RS04230 0.90 +0.4
952,429 - ABZR86_RS04230 0.90 +1.1
952,609 + +0.1
952,609 + +2.0
952,609 + +0.9
952,700 + ABZR86_RS04235 0.11 -1.0
952,700 + ABZR86_RS04235 0.11 +1.8
952,700 + ABZR86_RS04235 0.11 -1.2
952,701 - ABZR86_RS04235 0.12 +0.2
952,707 + ABZR86_RS04235 0.12 -0.4
952,707 + ABZR86_RS04235 0.12 -0.7
952,707 + ABZR86_RS04235 0.12 +0.7
952,707 + ABZR86_RS04235 0.12 -0.3
952,707 + ABZR86_RS04235 0.12 +0.9
952,707 + ABZR86_RS04235 0.12 +1.2
952,707 + ABZR86_RS04235 0.12 -0.5
952,707 + ABZR86_RS04235 0.12 +0.3
952,707 + ABZR86_RS04235 0.12 +0.1
952,707 + ABZR86_RS04235 0.12 -0.6
952,707 + ABZR86_RS04235 0.12 -0.5
952,707 + ABZR86_RS04235 0.12 +0.1
952,707 + ABZR86_RS04235 0.12 -1.6
952,708 - ABZR86_RS04235 0.12 -0.5
952,708 - ABZR86_RS04235 0.12 -0.1
952,708 - ABZR86_RS04235 0.12 -1.1
952,708 - ABZR86_RS04235 0.12 -2.6
952,708 - ABZR86_RS04235 0.12 -1.3
952,708 - ABZR86_RS04235 0.12 -3.4
952,708 - ABZR86_RS04235 0.12 -3.8
952,708 - ABZR86_RS04235 0.12 -0.5
952,708 - ABZR86_RS04235 0.12 +0.6
952,708 - ABZR86_RS04235 0.12 -2.4
952,708 - ABZR86_RS04235 0.12 -3.2
952,708 - ABZR86_RS04235 0.12 +0.4
952,708 - ABZR86_RS04235 0.12 +0.6
952,708 - ABZR86_RS04235 0.12 -0.1
952,708 - ABZR86_RS04235 0.12 -0.9
952,708 - ABZR86_RS04235 0.12 +0.7
952,710 - ABZR86_RS04235 0.13 -2.7
952,710 - ABZR86_RS04235 0.13 +0.1
952,710 - ABZR86_RS04235 0.13 +2.0
952,710 - ABZR86_RS04235 0.13 +1.3
952,710 - ABZR86_RS04235 0.13 -3.2
952,710 - ABZR86_RS04235 0.13 -0.7
952,716 - ABZR86_RS04235 0.13 +1.8
952,716 - ABZR86_RS04235 0.13 +1.4
952,929 - ABZR86_RS04235 0.37 +0.1
952,974 + ABZR86_RS04235 0.42 +2.0
952,986 + ABZR86_RS04235 0.43 +0.4
952,986 + ABZR86_RS04235 0.43 +1.4
952,986 + ABZR86_RS04235 0.43 +0.3
952,986 + ABZR86_RS04235 0.43 +0.7
952,987 - ABZR86_RS04235 0.44 -1.3
952,987 - ABZR86_RS04235 0.44 +0.7
953,118 + ABZR86_RS04235 0.58 +1.1
953,118 + ABZR86_RS04235 0.58 +1.2
953,118 + ABZR86_RS04235 0.58 -0.6
953,119 - ABZR86_RS04235 0.58 -0.6
953,320 + ABZR86_RS04235 0.81 -3.2
953,321 - ABZR86_RS04235 0.81 -1.4
953,338 + ABZR86_RS04235 0.83 +1.3
953,339 - ABZR86_RS04235 0.83 -3.4
953,462 + -2.3
953,463 - -3.6
953,463 - +0.8
953,473 + -2.4
953,474 + -1.1
953,474 + +0.9
953,475 - +0.3
953,582 + -2.7
953,582 + +0.1
953,583 - -0.9

Or see this region's nucleotide sequence