Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02970 and ABZR86_RS02975 are separated by 113 nucleotides ABZR86_RS02975 and ABZR86_RS02980 are separated by 388 nucleotides ABZR86_RS02980 and ABZR86_RS02985 overlap by 14 nucleotides ABZR86_RS02985 and ABZR86_RS02990 are separated by 27 nucleotides
ABZR86_RS02970: ABZR86_RS02970 - PAS domain-containing sensor histidine kinase, at 606,756 to 608,690
_RS02970
ABZR86_RS02975: ABZR86_RS02975 - response regulator, at 608,804 to 609,205
_RS02975
ABZR86_RS02980: ABZR86_RS02980 - DUF3182 family protein, at 609,594 to 610,724
_RS02980
ABZR86_RS02985: ABZR86_RS02985 - alpha/beta fold hydrolase, at 610,711 to 611,526
_RS02985
ABZR86_RS02990: ABZR86_RS02990 - enterotoxin A family protein, at 611,554 to 612,549
_RS02990
Position (kb) 609
610
611 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 608.626 kb on + strand at 608.626 kb on + strand at 608.627 kb on - strand at 608.627 kb on - strand at 608.636 kb on - strand at 608.666 kb on - strand at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.988 kb on - strand, within ABZR86_RS02980 at 610.055 kb on + strand, within ABZR86_RS02980 at 610.055 kb on + strand, within ABZR86_RS02980 at 610.056 kb on - strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.245 kb on + strand, within ABZR86_RS02980 at 610.246 kb on - strand, within ABZR86_RS02980 at 610.246 kb on - strand, within ABZR86_RS02980 at 610.285 kb on + strand, within ABZR86_RS02980 at 610.286 kb on - strand, within ABZR86_RS02980 at 610.294 kb on - strand, within ABZR86_RS02980 at 610.427 kb on + strand, within ABZR86_RS02980 at 610.427 kb on + strand, within ABZR86_RS02980 at 610.427 kb on + strand, within ABZR86_RS02980 at 610.428 kb on - strand, within ABZR86_RS02980 at 610.428 kb on - strand, within ABZR86_RS02980 at 610.431 kb on + strand, within ABZR86_RS02980 at 610.432 kb on - strand, within ABZR86_RS02980 at 610.432 kb on - strand, within ABZR86_RS02980 at 610.449 kb on + strand, within ABZR86_RS02980 at 610.450 kb on - strand, within ABZR86_RS02980 at 610.450 kb on - strand, within ABZR86_RS02980 at 610.611 kb on + strand, within ABZR86_RS02980 at 610.612 kb on - strand at 610.692 kb on + strand at 610.692 kb on + strand at 610.693 kb on - strand at 610.693 kb on - strand at 610.693 kb on - strand at 610.880 kb on + strand, within ABZR86_RS02985 at 611.113 kb on + strand, within ABZR86_RS02985 at 611.302 kb on + strand, within ABZR86_RS02985 at 611.338 kb on + strand, within ABZR86_RS02985 at 611.339 kb on - strand, within ABZR86_RS02985 at 611.558 kb on - strand at 611.558 kb on - strand at 611.558 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 608,626 + +2.1 608,626 + -0.9 608,627 - -0.2 608,627 - +0.2 608,636 - -0.9 608,666 - -0.2 609,044 + ABZR86_RS02975 0.60 -0.3 609,044 + ABZR86_RS02975 0.60 +1.3 609,044 + ABZR86_RS02975 0.60 -0.1 609,732 + ABZR86_RS02980 0.12 +0.7 609,732 + ABZR86_RS02980 0.12 +0.4 609,732 + ABZR86_RS02980 0.12 +0.4 609,732 + ABZR86_RS02980 0.12 -2.3 609,732 + ABZR86_RS02980 0.12 +1.3 609,733 - ABZR86_RS02980 0.12 +2.2 609,733 - ABZR86_RS02980 0.12 +1.8 609,733 - ABZR86_RS02980 0.12 +0.6 609,733 - ABZR86_RS02980 0.12 -0.3 609,733 - ABZR86_RS02980 0.12 +0.5 609,780 + ABZR86_RS02980 0.16 +0.6 609,780 + ABZR86_RS02980 0.16 +1.5 609,780 + ABZR86_RS02980 0.16 +1.7 609,988 - ABZR86_RS02980 0.35 +1.1 610,055 + ABZR86_RS02980 0.41 +1.1 610,055 + ABZR86_RS02980 0.41 -0.7 610,056 - ABZR86_RS02980 0.41 +0.4 610,245 + ABZR86_RS02980 0.58 -0.4 610,245 + ABZR86_RS02980 0.58 -1.3 610,245 + ABZR86_RS02980 0.58 +0.2 610,245 + ABZR86_RS02980 0.58 +0.4 610,245 + ABZR86_RS02980 0.58 +0.7 610,245 + ABZR86_RS02980 0.58 +1.9 610,245 + ABZR86_RS02980 0.58 -0.3 610,246 - ABZR86_RS02980 0.58 -0.5 610,246 - ABZR86_RS02980 0.58 +1.4 610,285 + ABZR86_RS02980 0.61 +1.0 610,286 - ABZR86_RS02980 0.61 -0.4 610,294 - ABZR86_RS02980 0.62 +1.4 610,427 + ABZR86_RS02980 0.74 -1.4 610,427 + ABZR86_RS02980 0.74 -2.7 610,427 + ABZR86_RS02980 0.74 +0.2 610,428 - ABZR86_RS02980 0.74 -1.1 610,428 - ABZR86_RS02980 0.74 +1.0 610,431 + ABZR86_RS02980 0.74 -1.7 610,432 - ABZR86_RS02980 0.74 +0.8 610,432 - ABZR86_RS02980 0.74 -0.1 610,449 + ABZR86_RS02980 0.76 +0.0 610,450 - ABZR86_RS02980 0.76 +0.8 610,450 - ABZR86_RS02980 0.76 -0.0 610,611 + ABZR86_RS02980 0.90 +0.4 610,612 - +0.5 610,692 + -0.3 610,692 + +0.1 610,693 - -2.5 610,693 - -4.7 610,693 - +0.8 610,880 + ABZR86_RS02985 0.21 -2.2 611,113 + ABZR86_RS02985 0.49 -2.5 611,302 + ABZR86_RS02985 0.72 +0.7 611,338 + ABZR86_RS02985 0.77 -0.8 611,339 - ABZR86_RS02985 0.77 -1.8 611,558 - -1.6 611,558 - -0.2 611,558 - -2.0
Or see this region's nucleotide sequence