Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS00505

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS00500 and ABZR86_RS00505 are separated by 28 nucleotidesABZR86_RS00505 and ABZR86_RS00510 are separated by 151 nucleotidesABZR86_RS00510 and ABZR86_RS00515 are separated by 120 nucleotides ABZR86_RS00500: ABZR86_RS00500 - NAD(P)/FAD-dependent oxidoreductase, at 96,340 to 97,527 _RS00500 ABZR86_RS00505: ABZR86_RS00505 - phospholipase A, at 97,556 to 98,626 _RS00505 ABZR86_RS00510: ABZR86_RS00510 - hypothetical protein, at 98,778 to 99,236 _RS00510 ABZR86_RS00515: ABZR86_RS00515 - crosslink repair DNA glycosylase YcaQ family protein, at 99,357 to 100,670 _RS00515 Position (kb) 97 98 99Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 96.607 kb on + strand, within ABZR86_RS00500at 96.608 kb on - strand, within ABZR86_RS00500at 96.682 kb on + strand, within ABZR86_RS00500at 96.682 kb on + strand, within ABZR86_RS00500at 96.682 kb on + strand, within ABZR86_RS00500at 96.683 kb on - strand, within ABZR86_RS00500at 96.683 kb on - strand, within ABZR86_RS00500at 96.683 kb on - strand, within ABZR86_RS00500at 96.683 kb on - strand, within ABZR86_RS00500at 96.706 kb on - strand, within ABZR86_RS00500at 96.865 kb on + strand, within ABZR86_RS00500at 96.865 kb on + strand, within ABZR86_RS00500at 96.937 kb on + strand, within ABZR86_RS00500at 96.938 kb on - strand, within ABZR86_RS00500at 96.938 kb on - strand, within ABZR86_RS00500at 97.132 kb on - strand, within ABZR86_RS00500at 97.366 kb on + strand, within ABZR86_RS00500at 97.366 kb on + strand, within ABZR86_RS00500at 97.367 kb on - strand, within ABZR86_RS00500at 97.593 kb on + strandat 97.593 kb on + strandat 97.594 kb on - strandat 97.612 kb on - strandat 97.612 kb on - strandat 97.612 kb on - strandat 97.653 kb on + strandat 97.653 kb on + strandat 97.653 kb on + strandat 97.653 kb on + strandat 97.654 kb on - strandat 97.654 kb on - strandat 97.654 kb on - strandat 97.654 kb on - strandat 97.803 kb on + strand, within ABZR86_RS00505at 97.803 kb on + strand, within ABZR86_RS00505at 97.803 kb on + strand, within ABZR86_RS00505at 97.804 kb on - strand, within ABZR86_RS00505at 97.804 kb on - strand, within ABZR86_RS00505at 98.007 kb on + strand, within ABZR86_RS00505at 98.007 kb on + strand, within ABZR86_RS00505at 98.007 kb on + strand, within ABZR86_RS00505at 98.007 kb on + strand, within ABZR86_RS00505at 98.008 kb on - strand, within ABZR86_RS00505at 98.043 kb on + strand, within ABZR86_RS00505at 98.044 kb on - strand, within ABZR86_RS00505at 98.082 kb on + strand, within ABZR86_RS00505at 98.082 kb on + strand, within ABZR86_RS00505at 98.082 kb on + strand, within ABZR86_RS00505at 98.083 kb on - strand, within ABZR86_RS00505at 98.107 kb on + strand, within ABZR86_RS00505at 98.109 kb on + strand, within ABZR86_RS00505at 98.109 kb on + strand, within ABZR86_RS00505at 98.109 kb on + strand, within ABZR86_RS00505at 98.110 kb on - strand, within ABZR86_RS00505at 98.142 kb on - strand, within ABZR86_RS00505at 98.287 kb on - strand, within ABZR86_RS00505at 98.287 kb on - strand, within ABZR86_RS00505at 98.287 kb on - strand, within ABZR86_RS00505at 98.508 kb on + strand, within ABZR86_RS00505at 98.508 kb on + strand, within ABZR86_RS00505at 98.509 kb on - strand, within ABZR86_RS00505at 98.509 kb on - strand, within ABZR86_RS00505at 98.509 kb on - strand, within ABZR86_RS00505at 98.652 kb on + strandat 98.817 kb on + strandat 98.817 kb on + strandat 98.817 kb on + strandat 98.817 kb on + strandat 98.818 kb on - strandat 98.818 kb on - strandat 98.818 kb on - strandat 98.818 kb on - strandat 98.818 kb on - strandat 98.818 kb on - strandat 98.818 kb on - strandat 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.896 kb on + strand, within ABZR86_RS00510at 98.897 kb on - strand, within ABZR86_RS00510at 98.897 kb on - strand, within ABZR86_RS00510at 98.897 kb on - strand, within ABZR86_RS00510at 98.897 kb on - strand, within ABZR86_RS00510at 98.897 kb on - strand, within ABZR86_RS00510at 98.998 kb on + strand, within ABZR86_RS00510at 98.999 kb on - strand, within ABZR86_RS00510at 98.999 kb on - strand, within ABZR86_RS00510at 99.354 kb on + strandat 99.355 kb on - strandat 99.589 kb on - strand, within ABZR86_RS00515

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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96,607 + ABZR86_RS00500 0.22 +0.7
96,608 - ABZR86_RS00500 0.23 +0.9
96,682 + ABZR86_RS00500 0.29 -0.0
96,682 + ABZR86_RS00500 0.29 +0.4
96,682 + ABZR86_RS00500 0.29 -1.2
96,683 - ABZR86_RS00500 0.29 +0.6
96,683 - ABZR86_RS00500 0.29 -0.6
96,683 - ABZR86_RS00500 0.29 -3.3
96,683 - ABZR86_RS00500 0.29 +0.9
96,706 - ABZR86_RS00500 0.31 +0.9
96,865 + ABZR86_RS00500 0.44 -0.4
96,865 + ABZR86_RS00500 0.44 +1.3
96,937 + ABZR86_RS00500 0.50 -0.6
96,938 - ABZR86_RS00500 0.50 -1.7
96,938 - ABZR86_RS00500 0.50 -0.8
97,132 - ABZR86_RS00500 0.67 -2.7
97,366 + ABZR86_RS00500 0.86 -1.4
97,366 + ABZR86_RS00500 0.86 +0.4
97,367 - ABZR86_RS00500 0.86 -0.4
97,593 + -1.3
97,593 + +1.6
97,594 - +0.2
97,612 - -0.1
97,612 - +0.0
97,612 - +2.2
97,653 + +1.5
97,653 + +1.6
97,653 + +0.4
97,653 + +1.2
97,654 - +0.2
97,654 - +0.1
97,654 - +1.0
97,654 - -0.3
97,803 + ABZR86_RS00505 0.23 -2.8
97,803 + ABZR86_RS00505 0.23 +2.3
97,803 + ABZR86_RS00505 0.23 +1.2
97,804 - ABZR86_RS00505 0.23 -1.4
97,804 - ABZR86_RS00505 0.23 -0.6
98,007 + ABZR86_RS00505 0.42 -0.5
98,007 + ABZR86_RS00505 0.42 +1.2
98,007 + ABZR86_RS00505 0.42 +0.4
98,007 + ABZR86_RS00505 0.42 +0.3
98,008 - ABZR86_RS00505 0.42 +0.5
98,043 + ABZR86_RS00505 0.45 -1.0
98,044 - ABZR86_RS00505 0.46 -1.4
98,082 + ABZR86_RS00505 0.49 +0.6
98,082 + ABZR86_RS00505 0.49 -0.3
98,082 + ABZR86_RS00505 0.49 +0.6
98,083 - ABZR86_RS00505 0.49 +2.1
98,107 + ABZR86_RS00505 0.51 -1.0
98,109 + ABZR86_RS00505 0.52 +1.0
98,109 + ABZR86_RS00505 0.52 -0.3
98,109 + ABZR86_RS00505 0.52 +0.2
98,110 - ABZR86_RS00505 0.52 +1.5
98,142 - ABZR86_RS00505 0.55 -0.3
98,287 - ABZR86_RS00505 0.68 +2.2
98,287 - ABZR86_RS00505 0.68 +1.0
98,287 - ABZR86_RS00505 0.68 +1.0
98,508 + ABZR86_RS00505 0.89 +0.9
98,508 + ABZR86_RS00505 0.89 -3.0
98,509 - ABZR86_RS00505 0.89 -2.3
98,509 - ABZR86_RS00505 0.89 -0.6
98,509 - ABZR86_RS00505 0.89 -0.8
98,652 + +0.3
98,817 + -0.2
98,817 + -0.3
98,817 + +0.4
98,817 + -2.7
98,818 - +0.3
98,818 - -2.0
98,818 - -0.9
98,818 - -0.7
98,818 - -3.7
98,818 - -0.1
98,818 - -1.3
98,896 + ABZR86_RS00510 0.26 +1.7
98,896 + ABZR86_RS00510 0.26 +0.2
98,896 + ABZR86_RS00510 0.26 +0.8
98,896 + ABZR86_RS00510 0.26 -1.1
98,896 + ABZR86_RS00510 0.26 -2.5
98,896 + ABZR86_RS00510 0.26 +0.2
98,896 + ABZR86_RS00510 0.26 +1.2
98,896 + ABZR86_RS00510 0.26 -3.5
98,896 + ABZR86_RS00510 0.26 -2.2
98,897 - ABZR86_RS00510 0.26 -0.7
98,897 - ABZR86_RS00510 0.26 -2.3
98,897 - ABZR86_RS00510 0.26 -2.2
98,897 - ABZR86_RS00510 0.26 -1.0
98,897 - ABZR86_RS00510 0.26 +0.0
98,998 + ABZR86_RS00510 0.48 +0.8
98,999 - ABZR86_RS00510 0.48 +0.5
98,999 - ABZR86_RS00510 0.48 -3.1
99,354 + +1.7
99,355 - -3.5
99,589 - ABZR86_RS00515 0.18 -0.9

Or see this region's nucleotide sequence