Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00290 and ABZR86_RS00295 are separated by 174 nucleotides ABZR86_RS00295 and ABZR86_RS00300 are separated by 13 nucleotides ABZR86_RS00300 and ABZR86_RS00305 are separated by 110 nucleotides ABZR86_RS00305 and ABZR86_RS00310 are separated by 108 nucleotides
ABZR86_RS00290: ABZR86_RS00290 - CocE/NonD family hydrolase, at 53,209 to 55,146
_RS00290
ABZR86_RS00295: ABZR86_RS00295 - GyrI-like domain-containing protein, at 55,321 to 55,464
_RS00295
ABZR86_RS00300: ABZR86_RS00300 - DUF3772 domain-containing protein, at 55,478 to 57,922
_RS00300
ABZR86_RS00305: ABZR86_RS00305 - deoxyribonuclease V, at 58,033 to 58,713
_RS00305
ABZR86_RS00310: ABZR86_RS00310 - AraC family transcriptional regulator, at 58,822 to 59,736
_RS00310
Position (kb) 55
56
57
58 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 54.609 kb on - strand, within ABZR86_RS00290 at 54.746 kb on + strand, within ABZR86_RS00290 at 54.746 kb on + strand, within ABZR86_RS00290 at 54.765 kb on - strand, within ABZR86_RS00290 at 54.797 kb on + strand, within ABZR86_RS00290 at 54.887 kb on + strand, within ABZR86_RS00290 at 54.887 kb on + strand, within ABZR86_RS00290 at 54.887 kb on + strand, within ABZR86_RS00290 at 54.888 kb on - strand, within ABZR86_RS00290 at 54.888 kb on - strand, within ABZR86_RS00290 at 54.948 kb on + strand, within ABZR86_RS00290 at 54.949 kb on - strand, within ABZR86_RS00290 at 54.998 kb on + strand at 54.999 kb on - strand at 54.999 kb on - strand at 54.999 kb on - strand at 54.999 kb on - strand at 54.999 kb on - strand at 55.261 kb on + strand at 55.668 kb on + strand at 55.668 kb on + strand at 55.668 kb on + strand at 55.669 kb on - strand at 55.669 kb on - strand at 55.669 kb on - strand at 55.669 kb on - strand at 55.669 kb on - strand at 56.173 kb on - strand, within ABZR86_RS00300 at 56.583 kb on + strand, within ABZR86_RS00300 at 56.648 kb on - strand, within ABZR86_RS00300 at 56.650 kb on - strand, within ABZR86_RS00300 at 56.650 kb on - strand, within ABZR86_RS00300 at 56.650 kb on - strand, within ABZR86_RS00300 at 56.650 kb on - strand, within ABZR86_RS00300 at 57.024 kb on + strand, within ABZR86_RS00300 at 57.025 kb on - strand, within ABZR86_RS00300 at 57.025 kb on - strand, within ABZR86_RS00300 at 57.025 kb on - strand, within ABZR86_RS00300 at 57.025 kb on - strand, within ABZR86_RS00300 at 57.025 kb on - strand, within ABZR86_RS00300 at 57.111 kb on + strand, within ABZR86_RS00300 at 57.112 kb on - strand, within ABZR86_RS00300 at 57.112 kb on - strand, within ABZR86_RS00300 at 57.112 kb on - strand, within ABZR86_RS00300 at 57.120 kb on + strand, within ABZR86_RS00300 at 57.340 kb on + strand, within ABZR86_RS00300 at 57.341 kb on - strand, within ABZR86_RS00300 at 57.341 kb on - strand, within ABZR86_RS00300 at 58.220 kb on + strand, within ABZR86_RS00305 at 58.220 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.288 kb on + strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.289 kb on - strand, within ABZR86_RS00305 at 58.650 kb on + strand at 58.651 kb on - strand at 58.651 kb on - strand at 58.723 kb on - strand at 58.790 kb on + strand at 58.790 kb on + strand at 58.791 kb on - strand at 58.865 kb on + strand at 58.865 kb on + strand at 58.865 kb on + strand at 58.866 kb on - strand at 58.866 kb on - strand at 58.866 kb on - strand at 58.866 kb on - strand at 58.866 kb on - strand at 58.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 54,609 - ABZR86_RS00290 0.72 -0.1 54,746 + ABZR86_RS00290 0.79 +1.9 54,746 + ABZR86_RS00290 0.79 +0.7 54,765 - ABZR86_RS00290 0.80 -2.7 54,797 + ABZR86_RS00290 0.82 -0.1 54,887 + ABZR86_RS00290 0.87 -3.6 54,887 + ABZR86_RS00290 0.87 -0.4 54,887 + ABZR86_RS00290 0.87 +0.6 54,888 - ABZR86_RS00290 0.87 +0.3 54,888 - ABZR86_RS00290 0.87 -1.9 54,948 + ABZR86_RS00290 0.90 -0.7 54,949 - ABZR86_RS00290 0.90 -2.4 54,998 + -0.1 54,999 - +0.5 54,999 - -2.3 54,999 - -1.6 54,999 - +0.2 54,999 - -0.4 55,261 + +0.2 55,668 + +1.0 55,668 + -1.5 55,668 + +1.3 55,669 - +0.5 55,669 - -2.4 55,669 - -0.4 55,669 - -0.3 55,669 - -2.5 56,173 - ABZR86_RS00300 0.28 -0.9 56,583 + ABZR86_RS00300 0.45 -2.6 56,648 - ABZR86_RS00300 0.48 +0.6 56,650 - ABZR86_RS00300 0.48 -0.6 56,650 - ABZR86_RS00300 0.48 -3.1 56,650 - ABZR86_RS00300 0.48 -3.4 56,650 - ABZR86_RS00300 0.48 -0.3 57,024 + ABZR86_RS00300 0.63 +0.5 57,025 - ABZR86_RS00300 0.63 +0.7 57,025 - ABZR86_RS00300 0.63 +1.0 57,025 - ABZR86_RS00300 0.63 +0.6 57,025 - ABZR86_RS00300 0.63 +1.0 57,025 - ABZR86_RS00300 0.63 +1.4 57,111 + ABZR86_RS00300 0.67 +0.8 57,112 - ABZR86_RS00300 0.67 +1.2 57,112 - ABZR86_RS00300 0.67 -0.7 57,112 - ABZR86_RS00300 0.67 -1.6 57,120 + ABZR86_RS00300 0.67 -0.2 57,340 + ABZR86_RS00300 0.76 +2.2 57,341 - ABZR86_RS00300 0.76 +0.7 57,341 - ABZR86_RS00300 0.76 +2.9 58,220 + ABZR86_RS00305 0.27 +1.7 58,220 + ABZR86_RS00305 0.27 +1.2 58,288 + ABZR86_RS00305 0.37 -2.5 58,288 + ABZR86_RS00305 0.37 +1.5 58,288 + ABZR86_RS00305 0.37 +0.4 58,288 + ABZR86_RS00305 0.37 +0.9 58,288 + ABZR86_RS00305 0.37 +1.4 58,288 + ABZR86_RS00305 0.37 +0.6 58,288 + ABZR86_RS00305 0.37 +1.2 58,289 - ABZR86_RS00305 0.38 -0.9 58,289 - ABZR86_RS00305 0.38 -2.9 58,289 - ABZR86_RS00305 0.38 -3.2 58,289 - ABZR86_RS00305 0.38 +1.0 58,289 - ABZR86_RS00305 0.38 -0.8 58,289 - ABZR86_RS00305 0.38 -3.3 58,289 - ABZR86_RS00305 0.38 +2.1 58,650 + -3.3 58,651 - +0.2 58,651 - +1.7 58,723 - +0.1 58,790 + -1.0 58,790 + +0.9 58,791 - +0.3 58,865 + -1.6 58,865 + -0.4 58,865 + -0.3 58,866 - -1.6 58,866 - +0.1 58,866 - -2.3 58,866 - -0.1 58,866 - -0.0 58,866 - -3.5
Or see this region's nucleotide sequence